Basic Information

Gene Symbol
-
Assembly
GCA_018907135.1
Location
JACCHX010000008.1:179604-190129[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.1e-13 6.4e-10 39.8 0.6 3 46 150 193 148 193 0.97

Sequence Information

Coding Sequence
ATGCAATGTAGTGGTAGACAGCTGGGGCCCCATCCATGCACTGTTTGTCAGACTGTAGTCGAGGCGGGCAACCAAAGCAGACCTCTATCACGTACCCAGGCCTCCCAGTATGGTTTAAGAGAGGATCAGGTACCTTCTGGTGCTCGCGTTTGCAATACATGTCGTTGTAAATCAGTACGTGGTCGCTACACAACGTGTCCATTGCCTGGTTGTCCGAACCTCAGCAACGCTAACTCCAAGACAAGGGTAAAGCGGTTGAGAGCTCTGCCGCCCAAATGGAATGACCTGCCACCGGAGACACGCGATCCTATTATTCAGGAGTTTCAAATACCGAGTAATACAACAAGATGTTGTTCGGCTTGCTTCAACCGAATATCGCGCCGCCTCGCGCCCCATTTTACAACTTCGAGCGGGGATGGACTTGACGAGGCAGATACGATTGGTCGTCAGTGGTCGGACGAAGAACTCGAGCAACTTAAAAAAGCGTTACGTGATCACGGCACTAACTGGCCAAAGGTTTCCGAACAGATCCTAGGAAAATCAAACCACCAATGCAAAAACTATTATTTGAGCTATAGGAAGAAGCTTGGTCTTGATCAGGTTGTAGCCGAGTATTACCAATCGCTTGGCGAGGAGCGAAGGCCCTGTCTTACTGATGAGGAGGAAAGCGGCAGTAGCACTAGTAGCTGTGATGAATTGGCTGTGCACGACACGAGTGACACAGCGAGCGCCGGAAGCCCTGCAAATACAATATCAAGTAGTACCCCAACGGCTTCAAGCTCCTCCTTAACGACTGCAGGGGTTCCGATATCTTTTCCTCAGGTCCAGGACACCAAATCCTGTGATAAACTTGCAGACGTTGCAGTGGTATCGTTAGTCGCACCATCGCCAATCAGCTCGCAGCAATCGCAGAATAACCCACCAACAAGTTCGAGAGAAGACTACGACAGTTCCGCCACGGAGACGGCGGACGAAGGTCAGGGTGGTACGGATTTGGATAATAACGGTGTCGTGACACTTACGTCGAACACTGGGAGTACAGGTAACACAAGTGGCAATGCAAGCTCCTTGCACCAGTCATCCCAAATAAATGTACTGGCGCAGTCCCAGTCTTCTACAGTTGTACAATCGCCGCCATCGACAACGAGCAATAACAATCCACTAACAGTTAAGGATCTTGTACTTGGCGTCATCGAAATGCAATTAAAACGGAACCACAACAGCCCCGGAGGTTCCAGCTCATCGGTGCCGGTGAGCTCTGGCACTCCAACAATATCTAGCATTTTAAAAACTGATCATCGAAATGATATAACTTTCGTACGCGAATATAAGCCTCCATCACAAGCGCCAAGCATGTCTAGTTCCGTTATGCCAAACAGGGATCCAAACTTGGCAACGCTTTCTGTAGTCTCAGGGCCACATCACGGACATCGTTCGACCTCAAGCCCTCATCCAATCAGCCAAATGCAAGCAACCATCACACCTTGTCCTCCGTCAGGAGCTAACCAGCCAATTCACCATAGTAATCAAGATATGCTTCCAAAAGAGGGACTCGTTGTTATGCAGGTACAACAGGCATTGCGAGAGACAGAGGGTACACTTGACTTAAGTATTAAAAAACCGCGCCAACAACCGGACTACAATCACTCATTACAGCCGTTATCGTCCCTCAAACCGGCCTCGGTAGGGCACTACCGATCCGAGCCCCCACCTCCTGCCACTTATTACCACTCTCATACGATTCCCGATCCTCAAAGTCGCAGCGCAAAAAGTCCACATGTGTATACCTCGTCATCGCGACCGCAGGCGTCTCTTACACCGAAGTTGAACAAAGTTTCGGTACCGCCGACGGCCCATCCCAAGCTCTCTCCCAAACTCAGCAATATGGCGACACCGCACAAAACTGGCTCCATTACTCATGGTACACCGGTTTCCAGTACCAGATATGATGGCTTACTTAGGCAGATGACACCGCCAGGTAATACCAGTCAACCGAACACCTCCACAAATCCAGTAAGTTCCAAAGAAACGGGCTCTATCACCCAAGGCACACCGGTTCATTCATTTACGGTGGACAAGCGAGCTCCAATTTACGACTACCACCGTTCCATCAGGCACTCTCCTGTAACCACAAGCAATGTTCCTGTACAAACGTCTCAGAATTCAGCAGGAGTCGTCGTCAGTCATGGGCAAAGTAGTAACAGCGTACAATACAATTCGTATTCACCACGTCAGGCTCCGAGCTACACAATGGAGCAACTGTCCTCCCGTCAGATCATTATGAATGATTACATAACAAGCCAACAGATGCATCCACGTAATCGAAGTAGCGGTTCAGCCGAAGCAGTGACCAAGACCGAGACTCCGACAACCCTGTACTGTGCCAGTACTCCACCTCCACCCTCACATCCCCAGGCGCGTCAAGGAGTCATCCAAAGGCACAACACACAGAAACATTATCCGCCTCCTCCTCCTGGGCTCGAAGCTTTCTCTAGTCTTGTTGATGTAGCCGTGCAACAGCCAAGTCTTCCGGTGCCTCATCCTCCAGCAAGTACTAGCGGTCACGAGGGCCTTTGCATGTCCATTGAACGAATGTATACTGAACGCTACGCAATGGACAATCGCTCGCTCCAGAATATGCCTAGACTTGCGCGCCAGCAAGCAGCTCAGTATCAGATGGCTGTTGCAATGCAGCAGCGAGAGGAACAACAACATAGATTAGCAGTACAGCAGCGTGAAAAAGAAATGCAACAGCAGGAATTGAGGCTTGCCGCCCAGCAAAAGAGGGAGAAAGAATTACAACAGCAGCAAGCAGACCATCGGCTAGCAGTACAGAGAGAGAACCTCGTTTATTTACAACAACAGCAGCAAAGATTTCAAAAACAGCATATTCAACATATTCATCAACAGCAACGAATGGAAGCAGAAAGACGACAGATTGTCCAGATTTATAAAGACCAACAGGAAGCACATCTCTACAGAGAATTATCGGAACGACAGTGCGAATCACCAAATATTTCAAAAGCTGGTGGATTTTTCCAACCTTCACGAATACAACAGCAATCACAGCCACCACCTCCTTCTTCGAGACACACTCAAGCATCTTCCAATCAACAAGGTGACTCTTCGTCTACATTGACCGCCGCTAGTTTGATCGATGCCATCATCACTCATCAAATAAATCAAAGTACTGACAGTAGCAGTGGTACTCCTACTGCCAATAACCAACCAACACGTCCTGGTGATCGTCTTTTTCAAGGGTTTCATAGGGACAGCCCAGCTGAACCAAATGGTATGGCTCACAGTCCAGGGGTAGAAGAAAATGTTACAATTAGTGGTTCTGGTAGTGGAGGTGGCAGCGTTAGTGGTAATAATAAAGCAATTACCCTTGGCGAACATGTCGATCACATTGTAAACAAAGATTACGGGCCACCAATGTCTTCCTATAGGCCCTATCAAGGTTATCAAATAACGGATGACCAATGGAAGCGGAGAAAAGGAACGGAGGTGGATACTGTAAAGTCAGGTGATGAGCGACAAATTATTCGCGTTGCCCAGCAAAAACCAGTTTCCTCGCAGTCTCAGTCAGTAAACAAGCAGTCCCAATTTCACACAGAACCGGTCTCACCACCTGAACCAACCACTAATCATTATCCTCGGCGCTACTACGAGCCGACCGCTGTCACAACAACCTCAGTCGTGCCTACCAGCAAGTCCCACCTCTCACCTCTAGACTACGTAAAAAATAAGATCGTGGAAGTCATGCGAACGGAAGATGACAAGACGAGTTCTGGCGATCGAAATGGCGGCCCCGGTAACGATAAAGACGAGAAGTCCTGTGCAGACCGTTCGCCTGGCGGCGAAATGATAATTGACGAGTCCCCGAGTCAGCCACCCGCTCCGACGCCTACTACATTCTATCCATTCAATGCTCTGGGTGTGCATACTGGACCACCTCCAGCCCCGCCACCGAGTGGTGCTGGAACTTTGGTCGCCGTTGTTAAAAGCGAGGAATCTGCACCACTTCTTTCTGCCCAGTACGAGCCATTATCCGACGAGGATTAA
Protein Sequence
MQCSGRQLGPHPCTVCQTVVEAGNQSRPLSRTQASQYGLREDQVPSGARVCNTCRCKSVRGRYTTCPLPGCPNLSNANSKTRVKRLRALPPKWNDLPPETRDPIIQEFQIPSNTTRCCSACFNRISRRLAPHFTTSSGDGLDEADTIGRQWSDEELEQLKKALRDHGTNWPKVSEQILGKSNHQCKNYYLSYRKKLGLDQVVAEYYQSLGEERRPCLTDEEESGSSTSSCDELAVHDTSDTASAGSPANTISSSTPTASSSSLTTAGVPISFPQVQDTKSCDKLADVAVVSLVAPSPISSQQSQNNPPTSSREDYDSSATETADEGQGGTDLDNNGVVTLTSNTGSTGNTSGNASSLHQSSQINVLAQSQSSTVVQSPPSTTSNNNPLTVKDLVLGVIEMQLKRNHNSPGGSSSSVPVSSGTPTISSILKTDHRNDITFVREYKPPSQAPSMSSSVMPNRDPNLATLSVVSGPHHGHRSTSSPHPISQMQATITPCPPSGANQPIHHSNQDMLPKEGLVVMQVQQALRETEGTLDLSIKKPRQQPDYNHSLQPLSSLKPASVGHYRSEPPPPATYYHSHTIPDPQSRSAKSPHVYTSSSRPQASLTPKLNKVSVPPTAHPKLSPKLSNMATPHKTGSITHGTPVSSTRYDGLLRQMTPPGNTSQPNTSTNPVSSKETGSITQGTPVHSFTVDKRAPIYDYHRSIRHSPVTTSNVPVQTSQNSAGVVVSHGQSSNSVQYNSYSPRQAPSYTMEQLSSRQIIMNDYITSQQMHPRNRSSGSAEAVTKTETPTTLYCASTPPPPSHPQARQGVIQRHNTQKHYPPPPPGLEAFSSLVDVAVQQPSLPVPHPPASTSGHEGLCMSIERMYTERYAMDNRSLQNMPRLARQQAAQYQMAVAMQQREEQQHRLAVQQREKEMQQQELRLAAQQKREKELQQQQADHRLAVQRENLVYLQQQQQRFQKQHIQHIHQQQRMEAERRQIVQIYKDQQEAHLYRELSERQCESPNISKAGGFFQPSRIQQQSQPPPPSSRHTQASSNQQGDSSSTLTAASLIDAIITHQINQSTDSSSGTPTANNQPTRPGDRLFQGFHRDSPAEPNGMAHSPGVEENVTISGSGSGGGSVSGNNKAITLGEHVDHIVNKDYGPPMSSYRPYQGYQITDDQWKRRKGTEVDTVKSGDERQIIRVAQQKPVSSQSQSVNKQSQFHTEPVSPPEPTTNHYPRRYYEPTAVTTTSVVPTSKSHLSPLDYVKNKIVEVMRTEDDKTSSGDRNGGPGNDKDEKSCADRSPGGEMIIDESPSQPPAPTPTTFYPFNALGVHTGPPPAPPPSGAGTLVAVVKSEESAPLLSAQYEPLSDED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00463928;
90% Identity
-
80% Identity
-