Basic Information

Insect: Kradibia gibbosae
Gene Symbol: pont
Assembly: GCA_018907135.1
Location: JACCHX010000004.1:23936876-23943178[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 8.3e-06 0.039 14.5 0.1 2 38 146 181 145 187 0.88

2 5 8e-15 3.8e-11 43.4 0.0 1 39 195 232 195 236 0.95

3 5 0.00016 0.76 10.4 0.0 7 34 253 279 249 285 0.89

4 5 3.2e-12 1.5e-08 35.0 0.0 4 39 310 345 307 349 0.92

5 5 1.6 7.5e+03 -2.4 0.0 9 18 394 403 394 405 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	8.3e-06	0.039	14.5	0.1	2	38	146	181	145	187	0.88
2	5	8e-15	3.8e-11	43.4	0.0	1	39	195	232	195	236	0.95
3	5	0.00016	0.76	10.4	0.0	7	34	253	279	249	285	0.89
4	5	3.2e-12	1.5e-08	35.0	0.0	4	39	310	345	307	349	0.92
5	5	1.6	7.5e+03	-2.4	0.0	9	18	394	403	394	405	0.87

Sequence Information

Coding Sequence: ATGTCCGAATCGGCAGCTTCGACAACGATTGATCATACACAGTTCGACACTTCATATTGCTTCAAATGGGGCAATTATCAGAGTCATTTGTCCGAGGTCGTACGCCAGTTACTTGAAGAGGAATGTATGGTCGACGTAACGCTTTACGCAGGCGGCGAACGCATCCAAGCTCACCGTCTCGTCTTGTGTGCCTGCAGTAGCTTGTTTCAAATTGAAGGTCTTGATGAATCTGAAATTCCAAATGAAAAAGATGCAACTACTGAAGAAACGTATTTTTTTAACGATTTGACTAAAGCAGAAGAAGAAGAAATAAAATTATTTGAAAAATCAAATATTGAAAAAATTAAAGATAAGAAAAGAAAGAGTTTAGAAGATTCAGATTCTATACTTAAAAAAAGAAGACGAAGAAAGAGTGTTTGTAAAAAAGAATATAGCGATGAAATGTTGTCTGCTGCTATTGCTGACATACGTGCTGGGAGCTCATTATTAGATGCAGCTGCAAGAAATCATATACCTAGATCGACTCTATATATGCGCGCAAAAGTTTTAGGAATTCCTTTGAATCCATCTAGAAGTGAATATACAAATGAAGACATGAAAGCAGCTATAGAAGCAGTCATAGCTGGATCCAGCCTACAACAAGCATCAGATTTATATGGAATTCCAAAAACAGTTTTATGGAGGAGAATTCAAAAAGAGGGATGTCAAACACCTAGACACGATACAAGAAAAAATTATGGTGCTGAAAAGCGAGAAGCTGCTGTCCAAGCATTAGCAAGAGGAGAAACTCTCACAAAAGTTGCAAATGAATATAAGATTCCAAAAACAACATTGTTTCGTGACAAAGCTCGACTAGTAGATGAAGGAAAGCTACCATCATCATATTGGAGAAAGCGCAAAACTGATACTGAAGATTTAAAGCGATCTCGTTTAGAAGAGGCGGTAGCAGCATGTAAAGATGGTAAAATGTCTCAAGCAACAGCATCTGTAACTTATCAAATACCAAAAACTACTATATGGAGGCGTCTTCAAAAAGATATTAAAAAAGATGTATCTTTGCTTACAAAGAAACTACAACGAAAAACTGAATTATCACTAGAAAAAAATCCAGAAATTATAAAAACAGAAGAATTAAACGAAACGGATTTTGAAGCCTATTGCCCAGCCGCTGGAATCGTTGTTGATATGATCAGATCCAAAAAAATGTCTGGACGTGCAATTTTATTTGCTGGTCCACCTGGAACAGGAAAGACTGCAGTGGCTTTGGCAATAGCTCAAGAATTAGGTAATAAAGTACCTTTTTGTCCTATGGTAGGTTCAGAAGTTTATAGTTCTGAAATCAAAAAGACAGAAGTTCTCATGGAAAACTTTAGGAGAGCTATTGGGTTAAGAATCAAGGAAACAAAAGAAGTTTATGAAGGAGAAGTCACTGAATTGTCACCTGTAGAAACTGAAAATCCAATGGGTGGTTATGGCAAGACTGTTTCACATGTTGTTATTGGATTAAAAACTGCAAAAGGAACTAAGCAATTGAAACTTGATCCATTGATTTATGAATCCTTACAAAAAGAAAAGATTGAAGTTGGTGATGTTATTTATATTGAAGCAAATAGTGGATCAGTAAAAAGGCAAGGTAGAAGTGATAATTATGCTACAGAATTTGATTTGGAAGCTGAAGAATATGTACCTTTGCCTAAAGGTGATGTTCACAAAAAGAAGGAAGTTATTCAGGATGTAACATTACATGATTTGGATGTTGCTAATGCAAAACCTCAAGGGGGGCAGGATATAATGTCCATGATGGGTCAATTAATGAAGCCAAAGAAAACAGAAATTACAGATAAATTGAGAAAAGAGATCAATAAAGTTGTCAATAAGTATATAGACCAGGGAATCGCTGAATTAATACCAGGAGTACTATTCATTGATGAAGTTCATATGCTTGATATAGAAACATTCACTTACCTCCATAGAGCTTTAGAAACAGCTATTGCTCCTATTGTAATATTTGCAACAAATCGTGGACAATGTGTTATTCGAGGAACAGAAGATATTATCTCACCACATGGAGTTCCTCTAGATCTATTAGATAGACTTCTTATAATAAAAACTTTGCCATATTCTAGATCTGAAATTGAACAAATTATCAAGTTGAGAGCAGTTACAGAGGGCTTACAACTTGAAGATGAAGCTCTTACAGTACTTAGTGAACTTGGTGCGAGAACTACCTTGAGATACGTAGTTCAATTATTAACCCCTGCTTCTTTAGCAGCAAAAATTAATGGTCGATCAAGTATTAAAAAGGATGATATTGAAGAAGTTAAAAGTTTATTTCTTGATGCAAAATCTTCTGCAAAAATTCTTACTCAACAAAAAGATAAATTTATGAAATAG
Protein Sequence: MSESAASTTIDHTQFDTSYCFKWGNYQSHLSEVVRQLLEEECMVDVTLYAGGERIQAHRLVLCACSSLFQIEGLDESEIPNEKDATTEETYFFNDLTKAEEEEIKLFEKSNIEKIKDKKRKSLEDSDSILKKRRRRKSVCKKEYSDEMLSAAIADIRAGSSLLDAAARNHIPRSTLYMRAKVLGIPLNPSRSEYTNEDMKAAIEAVIAGSSLQQASDLYGIPKTVLWRRIQKEGCQTPRHDTRKNYGAEKREAAVQALARGETLTKVANEYKIPKTTLFRDKARLVDEGKLPSSYWRKRKTDTEDLKRSRLEEAVAACKDGKMSQATASVTYQIPKTTIWRRLQKDIKKDVSLLTKKLQRKTELSLEKNPEIIKTEELNETDFEAYCPAAGIVVDMIRSKKMSGRAILFAGPPGTGKTAVALAIAQELGNKVPFCPMVGSEVYSSEIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELSPVETENPMGGYGKTVSHVVIGLKTAKGTKQLKLDPLIYESLQKEKIEVGDVIYIEANSGSVKRQGRSDNYATEFDLEAEEYVPLPKGDVHKKKEVIQDVTLHDLDVANAKPQGGQDIMSMMGQLMKPKKTEITDKLRKEINKVVNKYIDQGIAELIPGVLFIDEVHMLDIETFTYLHRALETAIAPIVIFATNRGQCVIRGTEDIISPHGVPLDLLDRLLIIKTLPYSRSEIEQIIKLRAVTEGLQLEDEALTVLSELGARTTLRYVVQLLTPASLAAKINGRSSIKKDDIEEVKSLFLDAKSSAKILTQQKDKFMK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00845371;
90% Identity: iTF_00845371;
80% Identity: iTF_00845371;