Kgib014076.1
Basic Information
- Insect
- Kradibia gibbosae
- Gene Symbol
- retn
- Assembly
- GCA_018907135.1
- Location
- JACCHX010000009.1:1227933-1236035[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.7e-14 4.2e-10 40.7 0.0 16 79 523 584 516 585 0.88
Sequence Information
- Coding Sequence
- ATGGCCAACGAAGGGAGTGCGAGCTCGGTTGCCAAGAATGAGAGGAAGAGGAGCCTCGTGCGATTATCGCGAGCCGAGATCCCGGCCAGATGCGATGGGGTTTCGCTCGGAGCCTCGGCGCCTGATCGGCCGCCGATCGGCCGCTCGTTTCCAACGAGTGTGCAAAATATATGTAACGTTCAATCGGTGCAGTGTCTCTCGGCTCCACCCATACTGCGCGCCTGTGTGCGTGTGTCCGCCACTCAGAGGCAAAGAGCGCGCGGATTGCACTCGCACGAGGTCGTGGCCCGTCCGGCGGCGAGTCTCTGGAATCGCGCCCTTCTGCCCTCGGCTCTCTCCTCGGCCTATGGGCGACCACCGGGTGTACGGTTAATGAGGCCCCGAGCGCATCGCGAGTGTCGCCCCTGCGGAATAGGGGAGGCCGGGGGGCCCTGCGGAACGGGCAGCTCCTCGCCCATCCATGGGTCCGGCAACGAGGTATCGGGCGACCTCTCTCCCCCCCCCCTCCCCAGCCCGCACCACCTAGCCGATTTCTCGTCACGACTGGCCGCTGATTACTTATTACGCCTCCTTCTTCTGCCGCCCATTCAAGCCGCTGCGGCCCGACGACTCGCAATTATTATACCGCCACTGTATTCTTACTCGACCGGCGTGCGCAATATAATTGATGTTTCATTTACTCCCTGCATTCCTGCGAGCATCGTCGATTGTAATAAATTTTGGGAAGGGCAGGGGAGCACATCGATCATCGTCATTAATTTACGTATGGCTCGCATGGACAGTCTGTTGCCCTTTTGGCTATGGGGGGCGGGAACGGAGGAGAGCTGGAGCATTGAAAAAACCCTTCCCATATGGGCTACGAGTAATTGCGGGGCCAATAATAAAGCCCACGGGGCCAAGCCTCTGCTCGATAGCCCAAAATTGCCGGTTCCCTCACTCGGTCGCCCGATACTCTTGCTCTTTCGCCGCTACCCGCGAGGCAGAAAAATGGCGGCCGTACGAGCCCTTCGTCCTCAATGGTGGATAAACGATCCCTTCCAAGCTCCGTCGGGTGGGCTCTTAAAAACCCCCCCGTCCCAACCCCGCCGCCTCGAACTCCTCGACCACCTTGTAGAGTCAAAGTCGCATTTGGGAACGGTGAAAAGTGGCGTCTCGGCGTCAAAAGTTGAGCTGCGTCTACGCGGGCACGATTCCAGCAGGGGGTGGCTCGCCGATACGCTGCACATTGGGGCGGATAAATTGGGTAGACGCGGGGGTGGCGATGGCGGCGGTAGACGCGGGGCTGTCGGGGTGGGAGTGGTCGGGAAAGGGCTAGCTTTTAAGTATCGCGTAAAACTCCGACGCGGCCCCGACGCCAATTTTACGAGGTTTGCTCAGGGCGGCGAGGGGACGGTCGGCGGTGAGATGGCGAGGAAGAGGCGGGGGTCGAGGCGTAGGAGTTGGAGGAGGAGGATAGGCAGAGCCCAAGCGGCCCGTAGCTCAACCCCGTCCGAGCCGCCCGCCGTGCTGCTCCTCTTCCTCGGCTTCCTCCTCCTTCCCTTGCCGCTTGCGCAGCGGCGATCGACGGAGCGCACACCGATCAACCGACTCCCGATAATGGCGAAATCAGTCCTCGACCTCTACGAGCTCTACAACCTGGTGATTGCCCGGGGCGGCCTCGTCGACGTCATCAACAAGAAGCTCTGGCAGGAAATCATCAAGGGCCTTCACCTCCCGTCGAGCATAACATCCGCCGCCTTCACACTGCGCACCCAGTAA
- Protein Sequence
- MANEGSASSVAKNERKRSLVRLSRAEIPARCDGVSLGASAPDRPPIGRSFPTSVQNICNVQSVQCLSAPPILRACVRVSATQRQRARGLHSHEVVARPAASLWNRALLPSALSSAYGRPPGVRLMRPRAHRECRPCGIGEAGGPCGTGSSSPIHGSGNEVSGDLSPPPLPSPHHLADFSSRLAADYLLRLLLLPPIQAAAARRLAIIIPPLYSYSTGVRNIIDVSFTPCIPASIVDCNKFWEGQGSTSIIVINLRMARMDSLLPFWLWGAGTEESWSIEKTLPIWATSNCGANNKAHGAKPLLDSPKLPVPSLGRPILLLFRRYPRGRKMAAVRALRPQWWINDPFQAPSGGLLKTPPSQPRRLELLDHLVESKSHLGTVKSGVSASKVELRLRGHDSSRGWLADTLHIGADKLGRRGGGDGGGRRGAVGVGVVGKGLAFKYRVKLRRGPDANFTRFAQGGEGTVGGEMARKRRGSRRRSWRRRIGRAQAARSSTPSEPPAVLLLFLGFLLLPLPLAQRRSTERTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -