Basic Information

Gene Symbol
grh
Assembly
GCA_018907135.1
Location
JACCHX010000001.1:8958999-8973374[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.9e-62 4.9e-58 196.9 0.0 28 221 330 525 315 527 0.92

Sequence Information

Coding Sequence
ATGGGCCAGAAGCTACTGGTGCAGGAATCCCCGGGCGGCGGCTCGACCGGACGGTTGGAGACCGGCTCCGAGGGCTCGGGCGGGGAGCTCCACCACTTCCTCCACCAGTACAACCAGCAGTCGCACAGTCCAGGACAGAATCTTCAAGGCGGCTTGTCCCTGCCCCTGAGTCCGCAGTCGCAGCAGGCTGCAATCGCGGGCGTGAAGCGCGAGCCCGAGGACCTGAGCTCCTCGAGGGGGGCACAGCAGACCAACAAGCGACACAAGCAAAGCCAACAGTCCGAGAGCCCGACGCCTCCCGGTATCTACCACCATCATCAGCATCAGCTCCAGTACGGCAGCCCGTACGATCCCTACGGCTCGTGCAGTCCCCGATTGCAGGCGACTTACACGTCGGCCTCCTCGAACAATGGCGCCAGCGGCAACGGCTCGAACGGCTCGGCAGGACTCCACCCAGAGGCCGGTGCCGTTTACGTGACCGGCGACACCCTACCGCCTCTGGTCTCTACCGGCTCGACGTCCCTGCCGACCTCCACGGCCTCCTACACGAGGTACGAAGTGGTGCCGAGCTCCTATGCAACCACCCACGCGATTCGCTCCTCCTCGAGCAGCAGTAAGGTACTCACCGTCGACCTGCCCAGCCCGGACTCGGGCATCGGGGCCGACGCCGTCACGCCCCGGCAAGACCATCACCAGACCACGACGCTCCATCAGTCGTCCTTCGATTATACGGAGCTCTGCTCGGGTGGTACGGGATCGGGTACCGCCGTCGTCCTCGAGAGCGGGGCTGTTATTCACCACCAACCACTGCAGCTGCAGATCCAGCAGGGACACGCGCCCGTAGCCCAGGTGCAGCGAGATGGTCTTGTTACTACGGGAGCAACCACTCCCAACTCCAACCCCAACCCACCGAGGTCACGACCCTGGCACGACTTCGGCCGACAAAACGACGCCGACAAAATTCAAATTCCAAAACTTTATTCAGCCTACGGCTTCAAGTACCACCTGGAGTCTCCCATCAGCACCTCGCAGCGCCGGGAAGACGACAGGATAACCTACATCAACAAGGGCCAGTTCTATGGCATTACACTGGACTACGTGCCGGATCCGGACAAACCTCTCCTAAAAGCGGGACAGACCGTCAAGAGCGTGGTTATGTTGATGTTCCGTGAGGAGAAGAGTCCGGAAGACGAAATCAAGGCGTGGCAGTTTTGGCATGGCAGACAACATTCTGTCAAGCAACGTATTCTCGATGCAGACACGAAAAATAGCGTAGGACTCGTAGGCTGCATCGAGGAAGTCGCACACAATGCTATCGCTGTTTATTGGAATCCACTCGAATCGTCAGCTAAGATAAACGTAGCCGTGCAGTGCCTAAGTACAGATTTCTCCAGTCAGAAGGGGGTGAAGGGTCTACCTCTTCACATACAAGTCGACACGTACGAGGAACCGCCACCGCATACCCACGCATACACACCACCATCGCATCGAGGCTACTGTCAAATCAAAGTTTTCTGCGATAAGGGAGCGGAAAGGAAAACGCGCGACGAGGAAAGAAGAGCAGCCAAGAGGAAAATGACCGCAACGGGACGGAAGAAGCTCGATGAGCTTTATCACTCTGTTACCGAAAGAAGCGAATTTTATTCAATGGCCGATCTCCACAAGCCACCGGTGCTGTTTTCGCCTCCAGCCGAGCACGCAATCGATAAGTTCTCGACGATGGAGCTCTCGGGATTCTACGGGGGCGGGGGCGGGGGCGGCGGCGGCGGCGAGACGGACAACTCCTCCCTGAGCAACGGGGAGCCCGGGGGCGGCCTCAAGGGCAGCGCCGGGGGGAGCCCGTACGCGCAGCAGCCGGGCGCGGGGGGCCGCGCGAGTCTGCCCGCCCTCAAGTTCCACAATCACTTCCCGCCCGACAACCTCGGGGCCATGCACGACAAGAAGGACTCGCTGCTTATGCAGGTGCAGGAGCTCCAGGGCACGGTGCTGCAGGGCGTGCAGCCGGGCCTCGGGGCCGGCCAGCTCATCGCCGGCACCCTCGGCAACAGGCTCCACATGCAGCCCCACATGCGCGCCGCCAACGCCGAGGAGAGGGTCATGCTCTACGTGAGGCAGGAGTCCGAGGACATCTACACGCCACTGCACATTGAGTCAAAGTACAAAATTGCATCGTCAAGTATTAATAACCTCTTTCGCAAAAATACGAAGGGAATTACAGCAAAAATTGACGACGACATGATCCGATTCTACGTGGACGAAGATCTGTTTATTCTGGAAGTATCGCATTCGAGGTTGTCAACCGAGCAACAGCAGGAGCGCTCCAACAGGAATATTGGAGGATCACCCTCGGATCCTGGCGACGGCCTGGAGCCGAGCTTCGACGTCACACTCATCGAAATGCCCATTAACTCCCAACCCACGATGACTTCGGTTTCACCCCACCAAACAGCTGTTGTGCAACATCACGTCGCCGCATCGTGA
Protein Sequence
MGQKLLVQESPGGGSTGRLETGSEGSGGELHHFLHQYNQQSHSPGQNLQGGLSLPLSPQSQQAAIAGVKREPEDLSSSRGAQQTNKRHKQSQQSESPTPPGIYHHHQHQLQYGSPYDPYGSCSPRLQATYTSASSNNGASGNGSNGSAGLHPEAGAVYVTGDTLPPLVSTGSTSLPTSTASYTRYEVVPSSYATTHAIRSSSSSSKVLTVDLPSPDSGIGADAVTPRQDHHQTTTLHQSSFDYTELCSGGTGSGTAVVLESGAVIHHQPLQLQIQQGHAPVAQVQRDGLVTTGATTPNSNPNPPRSRPWHDFGRQNDADKIQIPKLYSAYGFKYHLESPISTSQRREDDRITYINKGQFYGITLDYVPDPDKPLLKAGQTVKSVVMLMFREEKSPEDEIKAWQFWHGRQHSVKQRILDADTKNSVGLVGCIEEVAHNAIAVYWNPLESSAKINVAVQCLSTDFSSQKGVKGLPLHIQVDTYEEPPPHTHAYTPPSHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHSVTERSEFYSMADLHKPPVLFSPPAEHAIDKFSTMELSGFYGGGGGGGGGGETDNSSLSNGEPGGGLKGSAGGSPYAQQPGAGGRASLPALKFHNHFPPDNLGAMHDKKDSLLMQVQELQGTVLQGVQPGLGAGQLIAGTLGNRLHMQPHMRAANAEERVMLYVRQESEDIYTPLHIESKYKIASSSINNLFRKNTKGITAKIDDDMIRFYVDEDLFILEVSHSRLSTEQQQERSNRNIGGSPSDPGDGLEPSFDVTLIEMPINSQPTMTSVSPHQTAVVQHHVAAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00073486;
90% Identity
iTF_01218841;
80% Identity
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