Klyc006097.1
Basic Information
- Insect
- Keiferia lycopersicella
- Gene Symbol
- stc
- Assembly
- GCA_029255805.1
- Location
- JARACZ010000004.1:4964339-4979638[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 2 3.4e+04 -4.6 1.6 15 19 497 501 496 501 0.81 2 13 0.41 7e+03 -1.9 2.3 2 10 529 537 529 537 0.85 3 13 0.00023 4 8.5 19.8 4 19 545 560 543 560 0.93 4 13 2.9e-06 0.049 14.6 13.5 1 19 596 614 596 614 0.97 5 13 5.2e-05 0.89 10.5 12.0 1 18 655 672 655 673 0.98 6 13 3.2e-06 0.055 14.4 12.7 1 19 714 736 714 736 0.88 7 13 0.0007 12 6.9 6.4 1 11 776 786 776 787 0.95 8 13 0.1 1.8e+03 -0.0 0.5 3 10 790 797 790 797 0.93 9 13 2.8e-08 0.00047 21.0 14.3 1 19 803 821 803 821 0.99 10 13 0.046 7.8e+02 1.1 17.2 1 18 860 876 860 877 0.81 11 13 1.2 2e+04 -3.3 0.9 8 13 882 887 881 888 0.80 12 13 4.8e-08 0.00082 20.2 14.0 1 17 913 931 913 937 0.83 13 13 0.0014 24 6.0 10.7 1 18 943 965 943 966 0.87
Sequence Information
- Coding Sequence
- ATGTCCCAGTGGAACAATTCATACGATTACCAGGGCGGTTATCAGAGTGGTAACACCTGGAATGGCGACGTTAACAGCCAATTTGTGAACCAGTCGTACTATCCAGGTGGTCAGTATGATCAACCAAGCAACCAGTATGTTAGCTTCAACGAGTTTTTGTCCCAGATGCAGGGTACCAACGTGGGTGCAGCTTCCACAGCTTCCACATCCAACTTCAATAATGGTCAATATCCATATGAAGGAAACCAATACACCTATCAGAATATACCCTCAACTTCTCAGAATACTAATGAGAGTGCATCCTACAATTATTCCAATAATACTACTGTTAACAAAACAGATGCATATCAAGCACAGGCACAAAATCAGTACAATGCTACACAACAAGATTCAGCTATGACTGATGTAGCCTTTAAATCAAACCTTACTGCAACTGCCACTGAGTTTGTTCCAAAAAGTTTAACTGTAAAACCCACTTCTAGTGCACCTTATGTCAAGTCAGAACCATCTAAACCTAGAAACTCAAGGGAGCCGAAAAGTACTAGTTCATCAGATACTAATTGGAGAGAAAGACCCCAAACATCTGGGCAAAATAGTGGCTCCCGAAATGACTATGGGCAGAATGGTGGATCCCGAAATGATTATGTGCAGAATGGTAGTTCCCAAAATGACTATGGCCAGTCTAGTAGTTCCAGAATGGACTATAAAAACAAGGGAAGTTCCCGTAATGACTATAGACAAAATGATAGATATGATTCCAATAATCACAGCTACCAACAAGACTCAAATAATCATAGAGAATCTAATAGTCGTTATAATGAATCTGGCACTAGAAATAATGATTCTTACTACCGTAATTCAAATAACCGTAGCTATGATAGAAACTATGAATCCAGAATCAATGAGCTTAATAATCATAATGACCGACATGAGTCCCGCAACAGTGACTCAAATAGTCGTTATTATGACAGAAATCAAAAGGGTAATTctaaattgaataaaaacaGTAAAGATGACCGTACCTTCTACAATAGCGCTATAAATAAACAAGAGAAGAATGGCCGGGAAGACTCTAGGAGAGGGAGGAATTATACTGGGAGTTCCCGAGTGAGGGCTGCAGTAGATAGGAACATGGCAGAAGAAGAGCAGTTTGCCAGCAGCTATCTTCAGTATAAGGAAGAAAAAAGGGAGAGGGACAGGGAAGATGTAGGAAGGGGGAGGGAGATTGAAAGAATGGCTAAGGATAACATGCCAAGTCCCAAAAACAGGAAAAAGCCAGCAAATGAACATGGAGCCAACAACAAGGAAATGACGCAACGGGAGCGTCTATCTGAGCAGCTAGACAAGGGAACATTGGAATGCTTGGTGTGTTGCGACCGAGTGAAACAGATGGACCCCGTGTGGTCTTGTGCCAACTGTTACCATGTTCTGCATCTTCGTTGTATCAGAAAATGGGCCACAAGTAGTTCTGTTGAGGGTAAATGGCGTTGCCCAGCATGCCAAAACACGAGCGAGGATGTGCCAAACGAGTACTGGTGCATGTGCGGCGCGAAACGCTCGCCCGAATGGCAGCGCGGCGCGGTGGGCGCGCACACCTGCGGGCGTGGCTGCCGGCGCGCGCGGCCCTGCCCGCACCCCTGCCCGCTCACCTGCCACCCCGGCCCATGCCCGCCCTGCACCACCACAATCACCAAACACTGCGGCTGCGGTGCGGACTCCCGCATGGTGCTGTGCAGCGACAAGGCGCCGCTGGTGTGCGATCGCGTCTGCAACCGCCCGCTGGCTTGCGGCGCGCACGCCTGCCTCAAGCAGTGCCACGAGGGCCCGTGCGGGGACTGCACCGAGGTCGTCATTCAAGTATGCTACTGCGAGAAGAAAGAGAAGCGGTCGGTGGCGTGCACGCCGTCCAGCAGCGGCGTGACGAGCTGGTCGTGCGGCGCGGCGTGCTCGTTCGTGCTCGCGTGCGGCGCGCACCTGTGCAAGGACGCGTGCCACCCGCCGCCCTGTGCCCCCTGCGCGCGCAGCCCCGCCACCGTGCGCGCCTGCCCCTGCGGACACACCAAATTGAGCCCAGACTCTCGCAAGAAGTGCACCGACCCGATACCGACGTGCGACAACATCTGCCTGAAGCCGCTCACTTGCGGACCGCCCGACGACAAACACTTCTGCAAACAGACCTGTCACAATGGCGAATGTCCCGTGTGTCCCGACAAGACGCTCGTGGTGTGTCGTTGCAAGAACGCGACGCGCGAGGTGCCGTGCGCTGAGCTCCCAGATATGGACGACTTTTTCCTCTGCCAGAAGAAATGTAACAAGAAACTGTCGTGCGGCCGTCACCGCTGCCGCGCGGTTTGCTGCGCCGACAAGCAGCACCGCTGCGGCGTGGTGTGCGCGCGCTTCCTCGCGTGCGGCCTGCACCGCTGCGAGCAGTTCTGCCACACCGGCCACTGCGCGCCCTGTCCCCGGCTAGAGTTCGGCGAGCTGTCGTGCGAGTGCGGCGCGCAGGTGCTGCTGCCGCCGATCGCGTGCGGCACGAAGCCGCCGGCGTGCGCGGCGCCGTGCCGCCGGCAGCGCGCCTGCGGACACCCGCCGCACCACTCCTGCCACTCCGGCGACTGCCCGCCCTGCGTCGTGCTCACCACCAAGATGTGCCACGGCGGCCACGAGGAGCGTAAAACCATCCCGTGTTCGCAAGAAGAGTTCTCGTGCGGGCTGCCGTGCGGCAAGCCGCTGCCTTGCGGGAAACACACGTGCATCAAGACTTGCCACAAGGGACCCTGCGATACTGGCAAATGCACGCAACCGTGCACGGTGGTGCGTCCTACTTGCGGGCACGCGTGCGCGGCGCCCTGCCACGCGGACAACGGCGGCGCGTGCCCCTCCAGCGCGCCCTGCAAGCGCACCGTGCGCGCCACGTGCCCCTGCGCGCGCAGGCACGCCGAGCGGACCTGCGCCGACAACGCGCGCGACCGGGCCAAAATTCTCAGCGCTCTCGCCGCTTCCAAAGTTCAAGAGGGAGGAACAGTAGACTTGACCGAAATGCGTCCCAGTGCTATGCTCAAAACGCTGGAATGCGACGACGAATGCCGCGTAGAAGCGCGAACGCGTCAACTCGCGCTGGCGCTGCAGATCCGCAACCCTGACGTGTCCAGCAAACTAGCGCCGCGCTACAGCGAGCACGTGCGCGCCACCGCCAGCAAGGAGCCCGGCTTCGCGCAGCAGATACACGACAAGCTCactgagctcgtgcagctcgcTAAGAAGTCGAAACAGAAGACGCGTTCGCACTCGTTTCCGTCGATGAACTGGGCGCGGCGACAATTCGTGCACGAACTGTGCGAGCAGTTCGGCTGCGAGTCCGTCGCGTACGACGCCGAGCCCAACCGGAACGTGGTCGCCACCGCCGACAGGGAGAAGTCGTGGTTGCCTGCAATGAGTATCCTGGAAGTACTAGCGCGCGAGGCGGGCAAGCGGCGCATCCCCGGCCCCGTGCTGCGCGCGCCCGCTGCTGCCAGCGCGGCGCACGCGGCGCAGCCCGGCCCCAACACTGCCAATGAGTATGCAAGCGGCGCATCCCCGGCCCCGTGCTGCGCGCGCCCGCTGCTGCCAGCGCGGCGCACGCGGCGCAGCCCGGCCCCAACACTGCCAATATGCAAGCGGCGCATCCCCGGCCCCGTGCTGCGCGCGCCCGCTGCTGCCAGCGCGGCGCACGCGGCGCAGCCCGGCCCCAACACTGCCAATGAGTATGCAAGCGGCGCATCCCCGGCCCCGTGCTGCGCGCGCCCGCTGCTGCCAGCGCGGCGCACGCGGCGCAGCCCGGCCCCAACACTGCCAAGTGAGTGCAATGCTGCAGTGAGTATGCAAGCGGCGCATCCCCGGCCCCGTGCTGCGCGCGCCCGCTGCTGCCAGCGCGGCGCACGCGGCGCAGCCCGGCCCCAACACTGCCAAGTGAGTGCAATGCTGCATGAGTATGCAAGCGGCGCATCCCCGGCCCCGTGCTGCGCGCGCCCGCTGCTGCCAGCGCGGCGCACGCGGCGCAGCCCGGCCCCAACGCTGCCAAGTGAGTGCAATGCTGCAGTGACTATGCAAGCGGCGCATCCCCGGCCCCGTGCTGCGCGCGCCCGCTGCTGCCAGCGCGGCCCACGCGGCGCAGCCCGGCCCCAACACTGCCAACGGCGCATCCCCGGCCCCGTGCTGCGCGCGCCCGCTGCTGCCAGCGCGGCCCACGCGGCGCAGCCCGGCCCCAACACTGCCAAATCATCAGGCTGGGCGACCCTCACGTCGACCAACGCGTGGGCGTCCCGCAGCGCAGCCCGGCCCTCCGCCACCGCCTCCAGCACCTCTACTGcctccgcccccgccgcccctaCCGCCCCCGCCACACCCGCGCCCCCCAAGATAGACTACTTCGACAATCCGCCCGACAACTAG
- Protein Sequence
- MSQWNNSYDYQGGYQSGNTWNGDVNSQFVNQSYYPGGQYDQPSNQYVSFNEFLSQMQGTNVGAASTASTSNFNNGQYPYEGNQYTYQNIPSTSQNTNESASYNYSNNTTVNKTDAYQAQAQNQYNATQQDSAMTDVAFKSNLTATATEFVPKSLTVKPTSSAPYVKSEPSKPRNSREPKSTSSSDTNWRERPQTSGQNSGSRNDYGQNGGSRNDYVQNGSSQNDYGQSSSSRMDYKNKGSSRNDYRQNDRYDSNNHSYQQDSNNHRESNSRYNESGTRNNDSYYRNSNNRSYDRNYESRINELNNHNDRHESRNSDSNSRYYDRNQKGNSKLNKNSKDDRTFYNSAINKQEKNGREDSRRGRNYTGSSRVRAAVDRNMAEEEQFASSYLQYKEEKRERDREDVGRGREIERMAKDNMPSPKNRKKPANEHGANNKEMTQRERLSEQLDKGTLECLVCCDRVKQMDPVWSCANCYHVLHLRCIRKWATSSSVEGKWRCPACQNTSEDVPNEYWCMCGAKRSPEWQRGAVGAHTCGRGCRRARPCPHPCPLTCHPGPCPPCTTTITKHCGCGADSRMVLCSDKAPLVCDRVCNRPLACGAHACLKQCHEGPCGDCTEVVIQVCYCEKKEKRSVACTPSSSGVTSWSCGAACSFVLACGAHLCKDACHPPPCAPCARSPATVRACPCGHTKLSPDSRKKCTDPIPTCDNICLKPLTCGPPDDKHFCKQTCHNGECPVCPDKTLVVCRCKNATREVPCAELPDMDDFFLCQKKCNKKLSCGRHRCRAVCCADKQHRCGVVCARFLACGLHRCEQFCHTGHCAPCPRLEFGELSCECGAQVLLPPIACGTKPPACAAPCRRQRACGHPPHHSCHSGDCPPCVVLTTKMCHGGHEERKTIPCSQEEFSCGLPCGKPLPCGKHTCIKTCHKGPCDTGKCTQPCTVVRPTCGHACAAPCHADNGGACPSSAPCKRTVRATCPCARRHAERTCADNARDRAKILSALAASKVQEGGTVDLTEMRPSAMLKTLECDDECRVEARTRQLALALQIRNPDVSSKLAPRYSEHVRATASKEPGFAQQIHDKLTELVQLAKKSKQKTRSHSFPSMNWARRQFVHELCEQFGCESVAYDAEPNRNVVATADREKSWLPAMSILEVLAREAGKRRIPGPVLRAPAAASAAHAAQPGPNTANEYASGASPAPCCARPLLPARRTRRSPAPTLPICKRRIPGPVLRAPAAASAAHAAQPGPNTANEYASGASPAPCCARPLLPARRTRRSPAPTLPSECNAAVSMQAAHPRPRAARARCCQRGARGAARPQHCQVSAMLHEYASGASPAPCCARPLLPARRTRRSPAPTLPSECNAAVTMQAAHPRPRAARARCCQRGPRGAARPQHCQRRIPGPVLRAPAAASAAHAAQPGPNTAKSSGWATLTSTNAWASRSAARPSATASSTSTASAPAAPTAPATPAPPKIDYFDNPPDN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -