Klyc003311.2
Basic Information
- Insect
- Keiferia lycopersicella
- Gene Symbol
- Zfy1
- Assembly
- GCA_029255805.1
- Location
- JARACZ010000002.1:12059480-12068832[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 0.0093 0.77 11.2 1.5 3 23 690 711 689 711 0.96 2 24 5.5 4.6e+02 2.5 1.1 4 23 1133 1154 1131 1154 0.84 3 24 0.037 3.1 9.3 0.6 1 22 1159 1180 1159 1180 0.95 4 24 2.5 2.1e+02 3.6 0.2 1 23 1222 1245 1222 1245 0.87 5 24 0.061 5 8.7 2.4 2 21 1255 1274 1254 1275 0.94 6 24 1.2 1e+02 4.5 0.1 3 23 1284 1305 1282 1305 0.86 7 24 3.5 2.9e+02 3.1 2.7 2 23 1324 1346 1323 1346 0.95 8 24 0.0061 0.51 11.8 0.1 1 23 1352 1375 1352 1375 0.93 9 24 0.17 14 7.3 0.0 1 23 1397 1420 1397 1420 0.90 10 24 0.0015 0.13 13.7 1.8 1 23 1425 1447 1425 1447 0.97 11 24 0.013 1.1 10.8 0.2 1 23 1453 1476 1453 1476 0.95 12 24 0.0031 0.26 12.7 1.3 1 23 1489 1511 1489 1511 0.97 13 24 0.00023 0.02 16.3 1.8 1 23 1563 1586 1563 1586 0.97 14 24 0.00046 0.039 15.3 3.0 1 23 1645 1668 1645 1668 0.96 15 24 0.0018 0.15 13.4 2.3 3 23 1692 1713 1690 1713 0.95 16 24 0.11 9.6 7.8 0.1 2 23 1719 1741 1718 1741 0.93 17 24 0.72 60 5.3 0.3 1 20 1784 1803 1784 1805 0.83 18 24 0.0016 0.14 13.6 0.6 1 23 1815 1837 1815 1837 0.93 19 24 0.00014 0.012 16.9 0.4 2 23 1926 1948 1925 1948 0.93 20 24 4.4e-07 3.6e-05 24.8 1.4 3 23 1955 1975 1954 1975 0.98 21 24 0.0062 0.52 11.8 2.1 1 23 1992 2014 1992 2015 0.95 22 24 0.19 16 7.1 0.0 1 23 2038 2060 2038 2060 0.98 23 24 0.028 2.3 9.7 0.5 1 23 2066 2089 2066 2089 0.95 24 24 0.00034 0.028 15.8 0.4 1 23 2098 2121 2098 2121 0.96
Sequence Information
- Coding Sequence
- ATGAGTGTGAATTATAATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGACTCGGAAACTCCACACCTCGCCTCGAAAATCAAGGATTGTGTGTCCATACAAATAACCGAAAATGACGACTTGCCACTGAATTGCTGCAGGAAATGTGTGGACAATGTGCATAACTGGCACATATTCAAGTCAGTTTGTGAAAGGACACAAAACAAACTACTGTCTTTGAGTAATAAGCATGGAAGCCAACTAGAAGCTGAGGTGAACATAAAAAGTGAACCTTTGTCTGATGAGGCTTATCATGATGGAGTTGTCATTGATGGATCCTATCCAGAGTCTGAGAATGCCACTTCAAGTAAAGTGCAGCCGGAGGGGCCACCGATCTTGGCTTCACTGGGGCTCACACCGAGGAGTGATAAGAAATATGTAGACCCTCGCATGGACTGGCAACGAGTCCATGCCATATTGGACATCATTCAAGATGATGAGGTCATTGATTCTCTGCAGTCCACTGAAGAGTTGGATGTCCTACAACATTCCGATCATGACTCTGACTCAGAAATCGAACTGACATCTGATGTTGAAGTTGATGACTTGGACACATCATCTGGTTACAAACGTAGAAACGGTGAAACTATATCTAAAGATCCACTTCTATCAGAAACAGAAGTTTACAAGAAAGGAAAGTTGTCATATACACAAAAACGAAAAAGGAAATCGGCACAAGAGTGTTACCCTGAACCGAAGAATGCATGGCAGTTGCTGTTCACTGATGAGTTGCTTCAAATGATTGTTCATGCTACAAatgagaaaataaaaagaagaaatgaTTCCTCTGCTCCAACTCAAATTGATGAACTAAAGACACTTATTGGGATTTTGTATATTCATGGCATAATGAGGCCTACTCACCAGAAATCTCATGATTTATGGCACAGCGACTTGGGTGTGAGCTGCATCAAGAAAGCCATGAAATATGGAAGATTTAAATTCCTTTTGGAAAATTTGAGTTTCCATGTGGAAGAAGGAGATAGAAATACATATGATGTTATGAAGCGAATACGTAAAGTGCTGGATATGTTTGCACAAAACTGCAGGTTTGCCTTTGAAATAGGCAGTCAGGCAGTTGTAGATGAAATGATTGTCCCCGTCTATGGCCCATGCCCTTTTCGCTTTGAAATTGATAAGAAACCTGTTAAGAAGCATGGAATCAAATTGGTATTACTGGTGGACCCAACAAATTTTTATGTCAGCAATTTAGAGGTGGTGACATTGAACTCTTGTCAACCTGAACAAATAACTACTAAGTTAGTTCAGCATCTAGAGGGAACTCGAAAAACTATTGTTATGGACAGTTGGTTCAGTTCATTATCCCTCATCACAAAGTTGAAGAATGACTATCAACTGTACAGCCTTGCTGCCCTAAACAACAAGCATGAAATGCTAATACCACcactttttgtttcaaaatacaGGAAGAGTGAATCAGTGCTGACTGGATTTGTGGACGAAGACATTGCACTAGCATCCTACGTGGACAAGGAATATAAATCAGTAAATGTCCTGTCAAATGAACCCATGTTGTATAAAAAGCAGCCACAATTCAGGTCAGGCACAGCAGTTTGGCTGTACAAGAAGAATTATTCAGCTGTCGAAGTAGTCGATGTACTTATGCATTATTATACTACAATGCAAAACTGCAATGACTGGGCTCTGTCGTTATTTTTCACAATGCTGAATATCGCGTCCATAAACGCGCAAGTTATTTGGACTGCCCACAACTCGTCAGCAGTGAAACAGAGGCGTATATTTATCAGAGATTTGGCTGCAAATCTTTTGAATGGTGACTATCCCATGGGCGTCGAAAGTGAAAAAGAAGATGAAGAGGAAGAGGAGTATGACGAAGAGATGAACGACCAGCGCGTGCAGTCGTACTCCAAACCGGCCAAGTTTCCCGAGGTATCTATCACCGTGATGCGGCCCACCGGTGAGACGTTGCAGTCGCGGCAAGGCATCCAGCAGCTCGCGAGCAAGGACTGCCTGGTGTGTGGCCGGTCCTACCGGTACTCGCACAACGCGCGCCGACACGAACTTACCTCCCACGGCTTCGACAGGTACACCAACAAAGTTAATCCTCCCAAAAAACAGCACTCCTTCCCGCGGATGCAACCCAAACTTAGGCCGAACCCGTTTAACCCCAAAGCTCGACTCATGCCCAACCCACTCAACAGCCACAAAATGCAACTCCTCCCTAAGGCAATGCCACAGTTGATGCCAATGTCTGTGCCACATAAACCGGTCACGAGAGTCATCGCACCACCGAAACCTCTACCGgtcaaaactaataaaaatcaaCAAAACAACTTACCGTATCCTCTTCGTATAAAAGCGCTAAAAGACTTGcaaattaaaaagaaagaaCCTCAGATCCTTAAAACATTACTCACGTCGAAACCGGAAGTATTGGTGTCCGAGCCAGAACTCATTAATTCGGCGCCTGAAAGTCCGGAAACTTTGATATCTGAACCAGAAATTGCTTCATTCCAAGTTGAAACCATTTTATCGGAACCTGACGAACATAATGGTGGCGATGAACTAGATGGGGAACTTCATACAATTAAAAATCAAGCTGCGTATGATACTCTCGATATGGAGTCGGACAATGAAATAGAAATCGCCCGTCAAAAAGACGTTGTTGATAATGAAGGTGAAGATGAAGAACCTGACGCAAATCACGACGTTGAAGAAGGCATGCAACATGACGACGAGGATAATGGCGAAGAAGATGACAACGAAAAGTATAATAATGAAGAGGAAGAAAATGGAGATGTGGAAATGAACGAAACTAAAGCAGACGATGACGCTAAACAAGATGAAGAAATGAACGATGAAGGAGACCATGAAGAAAACGAAAACCACGAGGAACATGAAGACGAGGATGACCTTCCTCCTGAAGGCTTGGCTCCTGTCGTCGAAATAAACGAAGATATGGCGACCAACTCATACAATAGTGATATCAATGAAGAAGAGGACACTCTTGATGAAGCAGTCGACCCTaacgacacagtcgaccccaatgATACGGTCGACCCTAATGATACGGTCGACCCTAACGACGCAGTTGACCCCAACGATACAGTTGACCCCAATGACACAGTTGACCCTAACGACACAGTTGACCCCAACGACACAGCTGACCCCCACGAGTCTGTTGACCCAAATGATTCTGTTGATCCCAACGATACAGTTGATCAAGATACTGAACCAATAGAACGAGATCCTAACAAACAATACGTGACAAAATCTCAAAGTgaattcattgctaaatacagAGCCATTATCGAACAGATCAATACTAAACGTTGTCTATGTTGTGACAAAGAATATCCTCGCAGGAAAGCTGTCATACAACATCTGCAGAAAAATGGTCACAAAGTACCTAAACACACTTGTTATAATTGTGTCATCACTTTTACCCATATTGGCGCCTTGCTCAGCCACATGAGATCTAACAGTTGTACAGATCTGTGGAAAATTATCTATGACGAAAATGGAATATCTGAAGACATGGTCGTCGAAGATGAAGCGGAACCTAAAAAAATTCAGTACAAAGATATATTCAATGCAAGATCCTATGCTTGCAAATTGTGTCCAGCGAAGTTCAACTTGAAGCAATTTATCATGAAACATGTTTTAGATGTACATGAAGATGGACAGTCAATGGTGCCACTTCACTGTGTGCATTGTCGACAAAGATTCAAAGACAGAGTTCTTTGGAAGAAACATATCCGTAATGGTGACTGCACGGTTGAAATTGCGTGTGATTTGTGTCCGGAAAGGTTCTCAAATATAAACCGATTTAATGATCATGCTTTAGCTGAGCACGCCGGAAACTTTGACCAAATCAGTGAGAATCAATGCCCGGAAGGACGAAACACCGAGTGTCCAATTTGCTCAGTAAAACACCCGACTCATATCCACCTAGTGCGTCACTTAAAGAGTGTACACGGCGAAGAGAAACCATACTATTGTCAACAATGCGATGAAAAGTTTGCACAGAGTGCAGGCCTTGATGAACATATTTATCTCGCTCATTCTGGTTTGGAAAACACAGGACTTGATATGTCAATTGTCAAAGAAGAAGCGGAAGAGTACCACTACTCTTGTACTGAATGTAATGCTATTTTTGAAACTGTCGACGCTTGGACAGATCATCAGGTGGCCGAGCATAATCAAATCGCCCATTACTGTGACCAGTGCGACAAGAAGTTTTTGCGGCCATCGGAGCTGGCAGAGCATAAGAACACGCATTTGCGAGTCAAGTTTTACCCTTGCAGTATCTGTTCTAACTCTTACAGCACCCCGCAGAAGCTTTCGGACCATGTACAGCAAGTGCACCCCGGCGCTGGAGAACAGGTTGCGGGAGCAACTGAATTCTTCTGTGATATCTGCATCAGGTCGTTCAAAAGCCGACAAGCTTACTCTAATCACATGCGTATCCATGCCAAAGTGCCTACTACGAACAGGCGGCCTGGTGATCCGAAACTAGGTTTCGCTCCACAGATTGTCGGAAAGCCTATCAAACAGTTTGCCATGGCTCAACAAGCTCCGTCGAATTTGGTATTCAAACCAAACCCTAACGTTCCTAATGCTCCATACTCTTGTGATATTTGTGGAAAAGGATTTAtgcataagaaaaatatttggaaGCACAAGAAAGTTTTGCATGCCGATCTTCTCAATGACCGAAATGATAGTGAAGAGAACACAATGCACGCGTCCACTGAAGACGATGAATACAATATCGACGAGAACGGTGCACTCACCACCCCACAGTTTGACAGTTTCAATTTCTCAAACTTTACCAATAACGTACAACAGCAGCTTACTCAAGGCGAGGTGTATACTTGCGATATCTGCTATCAAAGATTTTCATTCAGAGATAGTTTGCGGAAGCACAAGCGCGCCAAACACGGCATCAAAGGTGGCAGCACCGGTAGCGAAACGCAGACTCAATTTACAGATGCAGGAAGCAGGACCAACTGCACAATCTGTAAGATATCGTTCACTGACAAGAAGTCTTACTACCGCCATAGAAAGAACGTACACAAGACCACGACACAGATGTGCAAAATATGTGGAAAACCGTTGAACTCTACTCTCGAACTTTATGAGCATTTGAAAGCGGCACACGCTCGTGAACTCTTGGGATACAATGCCAATCAAGGTTCTAGCAAATCTCAGGACGTCTCACAAGAGCTAGAAGATTACGAAGTCGATAATGAAGCAGTGGACCCTAGCGTGGACTACCAGGCTCGATACCCGTGCGACACTTGCGGTAAACAATTCCTCGGCCTGTTAGCTTTACAAAATCATCAATGTATAAACCAAATCACTTCGCAACCGCAGACGTTTGATTGCGAAATTTGCCACAAGAGCTACACGTCAATTGCTGCACTGAAAAGCCACCGCGGATGGCACTTACGTTCGCCGGACGGGAAAGCAGCCGCTAACAATACCGGGCTCTGGATGCCACAACACAAGGTGACCAGCAAAGTGAGCAAGCACGAGGTCGTCGATCACGCGCCGGCTAGCCGCGCCGCGCAGTCCACACCCACCGCCTCTAAGAGGAGACTCCCGCCAGAAGTAGAAGTTACCGTCGTCAATCCCAACAAGAAGCTGCGATCGGACGACTCGGTCGAAATGGATCATCTCAATAACTCTTCCGGTATCCCCGAAGACAAATACTGTACCATTTGTGACAAAGAATTCACGAAGCGCGCAGCTTACCAACGACACATGGACGAAGTGCACCAACCGAATTCTGTATTCTGTCCGGTCTGTGACAAGAGCTTCACGCGTAAGTCGACATTACTCGTTCACATGAAGAAGCATTACGAAGGTGGGGAAGGCACGTCGGCCGGCAACCAAATGGAGGAGGATTACGCGTGTGATCTTTGCGGAACGCAGTGCGACAGCGCGCAGTCTTTGCGAGCTCATCGCATGCGGCACCACGGCGAGGAGTCGGACCGCGAGTCCGAGGAGGAGGAGGGCAGCATCGGCGCAGCGGCGCCGGGCGAGTTTACGTGCGCGCAGTGCGGGGACGGCGTCGCCACGCCGCGCGACCTCATCGCGCACCGCTCCATGCACGCCACGCCCACCAAGTACTTCTGCAACATCTGCAAAGTCTACTTCGCTCGGGCACTGGACCTGTCCTCGCACACGCGCGCGCGACACGCCGACACGGAAAAAACCGCGATGTTCCCGTGTGCGATGTGCGACCGCTTCTACATGAACAAAAAGAGCTTGCAGCGGCATATTGAAATGGCTCACTGA
- Protein Sequence
- MSVNYNRVCRLCLSSRGELLPIFPTTSSDDSETPHLASKIKDCVSIQITENDDLPLNCCRKCVDNVHNWHIFKSVCERTQNKLLSLSNKHGSQLEAEVNIKSEPLSDEAYHDGVVIDGSYPESENATSSKVQPEGPPILASLGLTPRSDKKYVDPRMDWQRVHAILDIIQDDEVIDSLQSTEELDVLQHSDHDSDSEIELTSDVEVDDLDTSSGYKRRNGETISKDPLLSETEVYKKGKLSYTQKRKRKSAQECYPEPKNAWQLLFTDELLQMIVHATNEKIKRRNDSSAPTQIDELKTLIGILYIHGIMRPTHQKSHDLWHSDLGVSCIKKAMKYGRFKFLLENLSFHVEEGDRNTYDVMKRIRKVLDMFAQNCRFAFEIGSQAVVDEMIVPVYGPCPFRFEIDKKPVKKHGIKLVLLVDPTNFYVSNLEVVTLNSCQPEQITTKLVQHLEGTRKTIVMDSWFSSLSLITKLKNDYQLYSLAALNNKHEMLIPPLFVSKYRKSESVLTGFVDEDIALASYVDKEYKSVNVLSNEPMLYKKQPQFRSGTAVWLYKKNYSAVEVVDVLMHYYTTMQNCNDWALSLFFTMLNIASINAQVIWTAHNSSAVKQRRIFIRDLAANLLNGDYPMGVESEKEDEEEEEYDEEMNDQRVQSYSKPAKFPEVSITVMRPTGETLQSRQGIQQLASKDCLVCGRSYRYSHNARRHELTSHGFDRYTNKVNPPKKQHSFPRMQPKLRPNPFNPKARLMPNPLNSHKMQLLPKAMPQLMPMSVPHKPVTRVIAPPKPLPVKTNKNQQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPELINSAPESPETLISEPEIASFQVETILSEPDEHNGGDELDGELHTIKNQAAYDTLDMESDNEIEIARQKDVVDNEGEDEEPDANHDVEEGMQHDDEDNGEEDDNEKYNNEEEENGDVEMNETKADDDAKQDEEMNDEGDHEENENHEEHEDEDDLPPEGLAPVVEINEDMATNSYNSDINEEEDTLDEAVDPNDTVDPNDTVDPNDTVDPNDAVDPNDTVDPNDTVDPNDTVDPNDTADPHESVDPNDSVDPNDTVDQDTEPIERDPNKQYVTKSQSEFIAKYRAIIEQINTKRCLCCDKEYPRRKAVIQHLQKNGHKVPKHTCYNCVITFTHIGALLSHMRSNSCTDLWKIIYDENGISEDMVVEDEAEPKKIQYKDIFNARSYACKLCPAKFNLKQFIMKHVLDVHEDGQSMVPLHCVHCRQRFKDRVLWKKHIRNGDCTVEIACDLCPERFSNINRFNDHALAEHAGNFDQISENQCPEGRNTECPICSVKHPTHIHLVRHLKSVHGEEKPYYCQQCDEKFAQSAGLDEHIYLAHSGLENTGLDMSIVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQIAHYCDQCDKKFLRPSELAEHKNTHLRVKFYPCSICSNSYSTPQKLSDHVQQVHPGAGEQVAGATEFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRRPGDPKLGFAPQIVGKPIKQFAMAQQAPSNLVFKPNPNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADLLNDRNDSEENTMHASTEDDEYNIDENGALTTPQFDSFNFSNFTNNVQQQLTQGEVYTCDICYQRFSFRDSLRKHKRAKHGIKGGSTGSETQTQFTDAGSRTNCTICKISFTDKKSYYRHRKNVHKTTTQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQGSSKSQDVSQELEDYEVDNEAVDPSVDYQARYPCDTCGKQFLGLLALQNHQCINQITSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNTGLWMPQHKVTSKVSKHEVVDHAPASRAAQSTPTASKRRLPPEVEVTVVNPNKKLRSDDSVEMDHLNNSSGIPEDKYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYEGGEGTSAGNQMEEDYACDLCGTQCDSAQSLRAHRMRHHGEESDRESEEEEGSIGAAAPGEFTCAQCGDGVATPRDLIAHRSMHATPTKYFCNICKVYFARALDLSSHTRARHADTEKTAMFPCAMCDRFYMNKKSLQRHIEMAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -