Klyc027978.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Keiferia lycopersicella
Gene Symbol
Znf296
Assembly
GCA_029255805.1
Location
JARACZ010000033.1:1221055-1235627[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 49 0.37 31 6.2 1.7 1 23 407 429 407 429 0.97
2 49 1.4e-05 0.0011 20.1 1.3 1 23 478 501 478 501 0.96
3 49 4.5 3.7e+02 2.8 0.0 3 23 508 528 507 528 0.89
4 49 0.00026 0.022 16.1 8.7 1 23 532 554 532 554 0.98
5 49 0.00017 0.014 16.7 8.7 1 23 569 591 569 591 0.98
6 49 0.00017 0.014 16.7 8.7 1 23 605 627 605 627 0.98
7 49 0.00017 0.014 16.7 8.7 1 23 641 663 641 663 0.98
8 49 0.00021 0.017 16.4 5.1 1 22 678 699 678 699 0.95
9 49 0.00021 0.017 16.4 5.1 1 22 716 737 716 737 0.95
10 49 0.00017 0.014 16.7 8.7 1 23 752 774 752 774 0.98
11 49 0.00017 0.014 16.7 8.7 1 23 788 810 788 810 0.98
12 49 0.00021 0.017 16.4 5.1 1 22 825 846 825 846 0.95
13 49 0.00021 0.017 16.4 5.1 1 22 861 882 861 882 0.95
14 49 0.00017 0.014 16.7 8.7 1 23 899 921 899 921 0.98
15 49 0.00021 0.017 16.4 5.1 1 22 933 954 933 954 0.95
16 49 0.00024 0.02 16.2 8.3 1 23 967 989 967 989 0.98
17 49 0.00021 0.017 16.4 5.1 1 22 1000 1021 1000 1021 0.95
18 49 0.00021 0.017 16.4 5.1 1 22 1038 1059 1038 1059 0.95
19 49 0.00024 0.02 16.2 8.3 1 23 1074 1096 1074 1096 0.98
20 49 0.00024 0.02 16.2 8.3 1 23 1107 1129 1107 1129 0.98
21 49 0.00021 0.017 16.4 5.1 1 22 1140 1161 1140 1161 0.95
22 49 0.00017 0.014 16.7 8.7 1 23 1176 1198 1176 1198 0.98
23 49 0.00017 0.014 16.7 8.7 1 23 1212 1234 1212 1234 0.98
24 49 0.00017 0.014 16.7 8.7 1 23 1251 1273 1251 1273 0.98
25 49 0.00017 0.014 16.7 8.7 1 23 1288 1310 1288 1310 0.98
26 49 0.00021 0.017 16.4 5.1 1 22 1325 1346 1325 1346 0.95
27 49 0.00021 0.017 16.4 5.1 1 22 1362 1383 1362 1383 0.95
28 49 0.00017 0.014 16.7 8.7 1 23 1398 1420 1398 1420 0.98
29 49 0.00021 0.017 16.4 5.1 1 22 1435 1456 1435 1456 0.95
30 49 0.00021 0.017 16.4 5.1 1 22 1472 1493 1472 1493 0.95
31 49 0.00021 0.017 16.4 5.1 1 22 1509 1530 1509 1530 0.95
32 49 0.00017 0.014 16.7 8.7 1 23 1545 1567 1545 1567 0.98
33 49 0.00021 0.017 16.4 5.1 1 22 1582 1603 1582 1603 0.95
34 49 0.00021 0.017 16.4 5.1 1 22 1619 1640 1619 1640 0.95
35 49 0.00021 0.017 16.4 5.1 1 22 1656 1677 1656 1677 0.95
36 49 0.00021 0.017 16.4 5.1 1 22 1693 1714 1693 1714 0.95
37 49 0.00021 0.017 16.4 5.1 1 22 1730 1751 1730 1751 0.95
38 49 0.00017 0.014 16.7 8.7 1 23 1767 1789 1767 1789 0.98
39 49 0.00017 0.014 16.7 8.7 1 23 1804 1826 1804 1826 0.98
40 49 0.00021 0.017 16.4 5.1 1 22 1841 1862 1841 1862 0.95
41 49 0.00021 0.017 16.4 5.1 1 22 1878 1899 1878 1899 0.95
42 49 0.00017 0.014 16.7 8.7 1 23 1915 1937 1915 1937 0.98
43 49 0.00021 0.017 16.4 5.1 1 22 1952 1973 1952 1973 0.95
44 49 0.00017 0.014 16.7 8.7 1 23 1988 2010 1988 2010 0.98
45 49 0.00017 0.014 16.7 8.7 1 23 2025 2047 2025 2047 0.98
46 49 0.0049 0.41 12.1 0.4 2 23 2056 2077 2055 2077 0.96
47 49 2.6e-06 0.00022 22.4 1.9 1 23 2086 2108 2086 2108 0.99
48 49 2.2e-05 0.0019 19.5 0.7 1 23 2114 2137 2114 2137 0.97
49 49 0.00013 0.011 17.0 1.0 1 23 2143 2166 2143 2166 0.94

Sequence Information

Coding Sequence
ATGTTGCACAATAGCGGGGCTTACGGGCCCAACGACACTCCAATTAACGCGAATATACCTGTGAATATGACACAGGGATCTGCACCACTGAATATCAATCGTAATTTACAAAGTTTGAGCGATATCGCTCAACAACCATTACGAGGACCTAGTGGACATTACAATCTACCTAACTACCCAACATATGGCCTGGATTCACTAGATATGAGGGCGCATTTAAACAGTTTTTCGAGTCACCACCTCAAAGGGTATCCCAATGATTATCCCCCAGGGAATTCATCTACCGTGCCTCATATGCGGTGGCCAAACAGTATGACGCCTCTCAATTTGAACGCGCAGTCGACTTACGTGCCAGGTTTGCCAAATTATCACATGCCATACGAGAAACAACAGCCTAACAGTACTATAGTGTCCAGTGATATGAAAAATCAAAATTCGCACGAAGAGACTGACTTAATCATGCCCAGTGATCTCGCAAAAGCTACAGACAGCCAACACTATTTTTACAACACTCATCAAGAGACCTACAACCATTATAACCCAAATTATGGCTCTAACTTCTTAAAAGAAAGAATATCTCTAGATATGTCCAAAAGAAAAAGCTTGGAGACTACAGTTAAACTGATAGAAAACATTCTCATAAACACAAATAAAGAGTCCCAAAATGATTCAAGCACAAATAAAGAGGCAGAAGAGGTAAAAAATAACATTCTGCCAGAAAATTCACAAATGTCTCAAAATAACATAGTACAAGAAAAGTTAGATACACAAGTTGGTaaccaaataaaagaaacagcTGAAAACTATGACACCAAAACTGATGAACCTCCAGAAATGTCAAAAACTCCGCCATCCGatacaaaaacaaaacctaATGAAAGTTATAGCATGTTTAAATCATCAAGTATTCTACCAGGAGATTTATTCAATAAATCACAAAAACTATTCAAGCCGCCAAAAAAAGCGGAAAAAACCATTCCAAAGCCAAAGACAAGCTTCCAAGAGCCAGAAATTAAAATAGAAATCAGCGTTGATCCGTTACAACATATCAAAGAAGAAATCGGCGATTTGAACACAGACTACTATAATAGTCATTTCACGAGAGACATGAATGGGGTTGCCAGGGAGAATATTTCAGACGAAAGTCTGATTATCACCGACAACAGTGTTGAGGAAGCTACAGCTGTGGTAAAAAATgTGACAACATCAGACTATTACTACGAGTGCCCACACTGCGCTCTCCTATTCAACCACCCAAAAAGATTCCTGGTTCACGTGAAGTGGCACAACTTTGGACTTACCAACGAGAAACGGATGATGGAAGCGAGGGAGCGGGAGTTTCAAAAGAAACAGCGTAAAGAGGCTCGACTAGTGGATCAGGTGCAGAAGAACCTGACCAAAGCGAAGGAGAAGGAGGATCCCAACGCCACGTATACCTGCAAGGACTGCCCCAAGATATTCGTGTCGAAAGGAAGTCTGAAGAATCATAGAACTAGgtcacattcaaacaaaGTCCGCTCATGCGGCACGTGCGGCGCCACATTCCTCGGCTGGGCGAAGCTCAAGTCCCACGAAGCAGCTCACGACGCCCCATACAACTGCGACCAGTGCGGCAAGCAGTTCCGCCACAAGCACTCGCTCCACAGGCACCAGGAGACGCACATGGTGagccacatcatcatcatcatcatcatcatcatctgctacAGCTGCGACCAGTGCGGCAAGCAGTTCCGCCACAAGCACTCGCTCCACAGGCACCAGGAGACGCACATGGTGagccacatcatcatcatcatcatcatcatctgctacAGCTGCGACCAGTGCGGCAAGCAGTTCCGCCACAAGCACTCGCTCCACAGGCACCAGGAGACGCACATGGTGagccacatcatcatcatcatcatcatcatctgctacAGCTGCGACCAGTGCGGCAAGCAGTTCCGCCACAAGCACTCGCTCCACAGGCACCAGGAGACGCACATGGTGagccacatcatcatcatcatcatcatcatcatctgctacAGCTGCGACCAGTGCGGCAAGCAGTTCCGCCACAAGCACTCGCTCCACAGGCACCAGGAGACGCGCATGGTGagccacatcatcatcatcatcatcatcatcatcatctgctacAGCTGCGACCAGTGCGGCAAGCAGTTCCGCCACAAGCACTCGCTCCACAGGCACCAGGAGACGCGCATGGTGagccacatcatcatcatcatcatcatcatctgctacAGCTGCGACCAGTGCGGCAAGCAGTTCCGCCACAAGCACTCGCTCCACAGGCACCAGGAGACGCACATGGTGagccacatcatcatcatcatcatcatcatctgctacAGCTGCGACCAGTGCGGCAAGCAGTTCCGCCACAAGCACTCGCTCCACAGGCACCAGGAGACGCACATGGTGagccacatcatcatcatcatcatcatcatcatctgctacAGCTGCGACCAGTGCGGCAAGCAGTTCCGCCACAAGCACTCGCTCCACAGGCACCAGGAGACGCGCATGGTGagccacatcatcatcatcatcatcatcatctgctacAGCTGCGACCAGTGCGGCAAGCAGTTCCGCCACAAGCACTCGCTCCACAGGCACCAGGAGACGCGCATGGTGagccacatcatcatcatcatcatcatcatcatcatctgctacAGCTGCGACCAGTGCGGCAAGCAGTTCCGCCACAAGCACTCGCTCCACAGGCACCAGGAGACGCACATGGTGagccacatcatcatcatcatcatctgctacAGCTGCGACCAGTGCGGCAAGCAGTTCCGCCACAAGCACTCGCTCCACAGGCACCAGGAGACGCGCATGGTGagccacatcatcatcatcatcatctgctacAGCTGCGACCAGTGCGGCAAGCAGTTCCGCCACAAGCACTCGCTCCACAGGCACCAGGAGATGCACATGGTGagccacatcatcatcatcatctgctacAGCTGCGACCAGTGCGGCAAGCAGTTCCGCCACAAGCACTCGCTCCACAGGCACCAGGAGACGCGCATGGTGagccacatcatcatcatcatcatcatcatcatcatctgctacAGCTGCGACCAGTGCGGCAAGCAGTTCCGCCACAAGCACTCGCTCCACAGGCACCAGGAGACGCGCATGGTGagccacatcatcatcatcatcatcatcatctgctacAGCTGCGACCAGTGCGGCAAGCAGTTCCGCCACAAGCACTCGCTCCACAGGCACCAGGAGATGCACATGGTGagccacatcatcatcatcatctgctacAGCTGCGACCAGTGCGGCAAGCAGTTCCGCCACAAGCACTCGCTCCACAGGCACCAGGAGATGCACATGGTGagcaacatcatcatcatcatctgctacAGCTGCGACCAGTGCGGCAAGCAGTTCCGCCACAAGCACTCGCTCCACAGGCACCAGGAGACGCGCATGGTGagcctcatcatcatcatcatcatcatcatctgctacAGCTGCGACCAGTGCGGCAAGCAGTTCCGCCACAAGCACTCGCTCCACAGGCACCAGGAGACGCACATGGTGagcaacatcatcatcatcatcatcatcatctgctacAGCTGCGACCAGTGCGGCAAGCAGTTCCGCCACAAGCACTCGCTCCACAGGCACCAGGAGACGCACATGGTGagcctcatcatcatcatcatcatcatcatcatcatcatctgctacAGCTGCGACCAGTGCGGCAAGCAGTTCCGCCACAAGCACTCGCTCCACAGGCACCAGGAGACGCACATGGTGagccacatcatcatcatcatcatcatcatcatctgctacAGCTGCGACCAGTGCGGCAAGCAGTTCCGCCACAAGCACTCGCTCCACAGGCACCAGGAGACGCACATGGTGagccacatcatcatcatcatcatcatcatcatctgctacAGCTGCGACCAGTGCGGCAAGCAGTTCCGCCACAAGCACTCGCTCCACAGGCACCAGGAGACGCGCATGGTGagccacatcatcatcatcatcatcatcatcatctgctacAGCTGCGACCAGTGCGGCAAGCAGTTCCGCCACAAGCACTCGCTCCACAGGCACCAGGAGACGCGCATGGTGagccacatcatcatcatcatcatcatcatctgctacAGCTGCGACCAGTGCGGCAAGCAGTTCCGCCACAAGCACTCGCTCCACAGGCACCAGGAGACGCACATGGTGagccacatcatcatcatcatcatcatcatcatctgctacAGCTGCGACCAGTGCGGCAAGCAGTTCCGCCACAAGCACTCGCTCCACAGGCACCAGGAGACGCGCATGGTGagccacatcatcatcatcatcatcatcatcatctgctacAGCTGCGACCAGTGCGGCAAGCAGTTCCGCCACAAGCACTCGCTCCACAGGCACCAGGAGACGCGCATGGTGagccacatcatcatcatcatcatcatcatcatctgctacAGCTGCGACCAGTGCGGCAAGCAGTTCCGCCACAAGCACTCGCTCCACAGGCACCAGGAGACGCGCATGGTGagccacatcatcatcatcatcatcatcatctgctacAGCTGCGACCAGTGCGGCAAGCAGTTCCGCCACAAGCACTCGCTCCACAGGCACCAGGAGACGCACATGGTGagccacatcatcatcatcatcatcatcatcatctgctacAGCTGCGACCAGTGCGGCAAGCAGTTCCGCCACAAGCACTCGCTCCACAGGCACCAGGAGACGCGCATGGTGagccacatcatcatcatcatcatcatcatcatctgctacAGCTGCGACCAGTGCGGCAAGCAGTTCCGCCACAAGCACTCGCTCCACAGGCACCAGGAGACGCGCATGGTGagccacatcatcatcatcatcatcatcatcatctgctacAGCTGCGACCAGTGCGGCAAGCAGTTCCGCCACAAGCACTCGCTCCACAGGCACCAGGAGACGCGCATGGTGagcctcatcatcatcatcatcatcatcatcatctgctacAGCTGCGACCAGTGCGGCAAGCAGTTCCGCCACAAGCACTCGCTCCACAGGCACCAGGAGACGCGCATGGTGagccacatcatcatcatcatcatcatcatcatctgctacAGCTGCGACCAGTGCGGCAAGCAGTTCCGCCACAAGCACTCGCTCCACAGGCACCAGGAGACGCGCATGGTGagccacatcatcatcatcatcatcatcatcatctgctacAGCTGCGACCAGTGCGGCAAGCAGTTCCGCCACAAGCACTCGCTCCACAGGCACCAGGAGACGCACATGGTGagcctcatcatcatcatcatcatcatcatcatctgctacAGCTGCGACCAGTGCGGCAAGCAGTTCCGCCACAAGCACTCGCTCCACAGGCACCAGGAGACGCACATGGTGagccacatcatcatcatcatcatcatcatcatctgctacAGCTGCGACCAGTGCGGCAAGCAGTTCCGCCACAAGCACTCGCTCCACAGGCACCAGGAGACGCGCATGGTGagcctcatcatcatcatcatcatcatcatcatctgctacAGCTGCGACCAGTGCGGCAAGCAGTTCCGCCACAAGCACTCGCTCCACAGGCACCAGGAGACGCGCATGGTGagccacatcatcatcatcatcatcatcatcatctgctacAGCTGCGACCAGTGCGGCAAGCAGTTCCGCCACAAGCACTCGCTCCACAGGCACCAGGAGACGCACATGGTGagccacatcatcatcatcatcatcatcatcatctgctacAGCTGCGACCAGTGCGGCAAGCAGTTCCGCCACAAGCACTCGCTCCACAGGCACCAGGAGACGCGCATGGTGagccacatcatcatcatcatcatcatcatctgctacAGCTGCGACCAGTGCGGCAAGCAGTTCCGCCACAAGCACTCGCTCCACAGGCACCAGGAGACGCACATGGTGagccacatcatcatcatcatcatcatcatcatctgctacAGCTGCGACCAGTGCGGCAAGCAGTTCCGCCACAAGCACTCGCTCCACAGGCACCAGGAGACGCACATGGAGGAAACAGAAAAAACTCTTCGTTGCGAGACGTGCGGCAAGACGTTCGCAATCCTGGCGCGGTTCAAGGAGCACCAGCGGGGCCACGCGCGCGCCGAGCGGGGCCCCGTCTACCAGTGCAGCTACTGCGCCAAGTCCTTCACGCAGTCCTACAGCCTCACGATCCACGAGCGTACACACCGCGGCGAGAAACCGTACACCTGCGCGATCTGCAACACCAGCTACGGAACCAACTCCAGCCTCAAACGACACCTCAAAGTGTCGCACAACAGCTCGAAGCCGTTCGAGTGCTCGCTGTGCGGGCGCTGCTTCTCGTCCGAGCGCGCGCTCAACGCTCACACGGTGCGCTTGCACTCGTTCGAGCAGACCGGCGACCCGCTCGCGCCCAAGAAGAGGAAGAGGAACAAGAATGGGCCCAAAAAGGAACCCAAGGAATTCACCAAACAAATGCAAAAACAAACGGATACGAAACAAGAAATTAAGGAAACTGACGCGAAAGATATGGTCACTTGA
Protein Sequence
MLHNSGAYGPNDTPINANIPVNMTQGSAPLNINRNLQSLSDIAQQPLRGPSGHYNLPNYPTYGLDSLDMRAHLNSFSSHHLKGYPNDYPPGNSSTVPHMRWPNSMTPLNLNAQSTYVPGLPNYHMPYEKQQPNSTIVSSDMKNQNSHEETDLIMPSDLAKATDSQHYFYNTHQETYNHYNPNYGSNFLKERISLDMSKRKSLETTVKLIENILINTNKESQNDSSTNKEAEEVKNNILPENSQMSQNNIVQEKLDTQVGNQIKETAENYDTKTDEPPEMSKTPPSDTKTKPNESYSMFKSSSILPGDLFNKSQKLFKPPKKAEKTIPKPKTSFQEPEIKIEISVDPLQHIKEEIGDLNTDYYNSHFTRDMNGVARENISDESLIITDNSVEEATAVVKNVTTSDYYYECPHCALLFNHPKRFLVHVKWHNFGLTNEKRMMEAREREFQKKQRKEARLVDQVQKNLTKAKEKEDPNATYTCKDCPKIFVSKGSLKNHRTRSHSNKVRSCGTCGATFLGWAKLKSHEAAHDAPYNCDQCGKQFRHKHSLHRHQETHMVSHIIIIIIIIICYSCDQCGKQFRHKHSLHRHQETHMVSHIIIIIIIICYSCDQCGKQFRHKHSLHRHQETHMVSHIIIIIIIICYSCDQCGKQFRHKHSLHRHQETHMVSHIIIIIIIIICYSCDQCGKQFRHKHSLHRHQETRMVSHIIIIIIIIIICYSCDQCGKQFRHKHSLHRHQETRMVSHIIIIIIIICYSCDQCGKQFRHKHSLHRHQETHMVSHIIIIIIIICYSCDQCGKQFRHKHSLHRHQETHMVSHIIIIIIIIICYSCDQCGKQFRHKHSLHRHQETRMVSHIIIIIIIICYSCDQCGKQFRHKHSLHRHQETRMVSHIIIIIIIIIICYSCDQCGKQFRHKHSLHRHQETHMVSHIIIIIICYSCDQCGKQFRHKHSLHRHQETRMVSHIIIIIICYSCDQCGKQFRHKHSLHRHQEMHMVSHIIIIICYSCDQCGKQFRHKHSLHRHQETRMVSHIIIIIIIIIICYSCDQCGKQFRHKHSLHRHQETRMVSHIIIIIIIICYSCDQCGKQFRHKHSLHRHQEMHMVSHIIIIICYSCDQCGKQFRHKHSLHRHQEMHMVSNIIIIICYSCDQCGKQFRHKHSLHRHQETRMVSLIIIIIIIICYSCDQCGKQFRHKHSLHRHQETHMVSNIIIIIIIICYSCDQCGKQFRHKHSLHRHQETHMVSLIIIIIIIIIIICYSCDQCGKQFRHKHSLHRHQETHMVSHIIIIIIIIICYSCDQCGKQFRHKHSLHRHQETHMVSHIIIIIIIIICYSCDQCGKQFRHKHSLHRHQETRMVSHIIIIIIIIICYSCDQCGKQFRHKHSLHRHQETRMVSHIIIIIIIICYSCDQCGKQFRHKHSLHRHQETHMVSHIIIIIIIIICYSCDQCGKQFRHKHSLHRHQETRMVSHIIIIIIIIICYSCDQCGKQFRHKHSLHRHQETRMVSHIIIIIIIIICYSCDQCGKQFRHKHSLHRHQETRMVSHIIIIIIIICYSCDQCGKQFRHKHSLHRHQETHMVSHIIIIIIIIICYSCDQCGKQFRHKHSLHRHQETRMVSHIIIIIIIIICYSCDQCGKQFRHKHSLHRHQETRMVSHIIIIIIIIICYSCDQCGKQFRHKHSLHRHQETRMVSLIIIIIIIIICYSCDQCGKQFRHKHSLHRHQETRMVSHIIIIIIIIICYSCDQCGKQFRHKHSLHRHQETRMVSHIIIIIIIIICYSCDQCGKQFRHKHSLHRHQETHMVSLIIIIIIIIICYSCDQCGKQFRHKHSLHRHQETHMVSHIIIIIIIIICYSCDQCGKQFRHKHSLHRHQETRMVSLIIIIIIIIICYSCDQCGKQFRHKHSLHRHQETRMVSHIIIIIIIIICYSCDQCGKQFRHKHSLHRHQETHMVSHIIIIIIIIICYSCDQCGKQFRHKHSLHRHQETRMVSHIIIIIIIICYSCDQCGKQFRHKHSLHRHQETHMVSHIIIIIIIIICYSCDQCGKQFRHKHSLHRHQETHMEETEKTLRCETCGKTFAILARFKEHQRGHARAERGPVYQCSYCAKSFTQSYSLTIHERTHRGEKPYTCAICNTSYGTNSSLKRHLKVSHNSSKPFECSLCGRCFSSERALNAHTVRLHSFEQTGDPLAPKKRKRNKNGPKKEPKEFTKQMQKQTDTKQEIKETDAKDMVT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-