Klyc009286.1
Basic Information
- Insect
- Keiferia lycopersicella
- Gene Symbol
- SNAPC4
- Assembly
- GCA_029255805.1
- Location
- JARACZ010000006.1:14300402-14301337[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.31 5.1e+02 1.8 0.1 3 18 140 155 139 156 0.87 2 4 2.4 3.9e+03 -1.0 0.1 8 28 165 188 163 202 0.74 3 4 1.8e-05 0.029 15.4 0.0 22 44 214 237 195 239 0.90 4 4 2.5e-08 4.2e-05 24.5 0.2 2 43 247 290 246 293 0.90
Sequence Information
- Coding Sequence
- ATGGATGATAACAATCCCGAAACTGTTAGCACCAACTCTGATGAAGAAGCCTACCTGGAAGATCTCGAAGCTAGAAACCGGGAGCAAACTCTCCCTCCAACAACTACAGAACAAGATTTGAATAATGCTGAAAAAGCTGTTTCATTGAACGAAAAGTTGGATAATAAATATGATCAACTGCAAAAAGTACTTAATGTTCGATTAGTAGAGTGCCGTGAAAGACTTGCTGATGTTCGACAAAGCCGCCAAACATCATCTAACAGAGCAGCTGGCAACAGTCAACAAGTATCGCATTTTGTCTTTACCGGTAATCCCTATTTCAAAGACAGAGACGGTGTTTCAGCTCCAGCCAACGAGGATACCATCAAAATCGGACAATCGGGAATGTATGATTTGTCGAACATTAAAAGCTTACCGGATTGGACTTCTGAAGACAAAGAAGACCTTTATAATGAAATTATGAAGTTTATTCGAGAAAAGAGACAAGACGAACTTAAATCAAATCTAAAATGTTTAGTTTTGAaactgaaagaaaataaaaagaagtttgGCAAAATACTACAGAAAGATATAACTGCACTCAGAAAGGAAATCCGTTCAATCAAAGCTGCAGTTAACATACCTCTGCAACAAGATTATGACTGGGAAGTAATAGCTAGAGAACTCAATTTTAAACATACACCGGAAGAATGTCAGGCTTTCTGGAAgactgtaacaaaaaaaaaagaaattaatatgaaGAAATGGGACAAAACCGAACAAAAGAAATTATGTGAGGTCGCCATAGCGAACAAACATCAAGATTGGGATAAAATTGCCAGGGAACTAGGTACTGGACGCACCGGCTTCGAGTGTTTCGTTTTCTTTCGCCGTAATTTTAAGCTGCCAAATGACGAaaacgatgatgacgatgatgactATGAAgacgtagaatag
- Protein Sequence
- MDDNNPETVSTNSDEEAYLEDLEARNREQTLPPTTTEQDLNNAEKAVSLNEKLDNKYDQLQKVLNVRLVECRERLADVRQSRQTSSNRAAGNSQQVSHFVFTGNPYFKDRDGVSAPANEDTIKIGQSGMYDLSNIKSLPDWTSEDKEDLYNEIMKFIREKRQDELKSNLKCLVLKLKENKKKFGKILQKDITALRKEIRSIKAAVNIPLQQDYDWEVIARELNFKHTPEECQAFWKTVTKKKEINMKKWDKTEQKKLCEVAIANKHQDWDKIARELGTGRTGFECFVFFRRNFKLPNDENDDDDDDYEDVE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -