Klyc005727.1
Basic Information
- Insect
- Keiferia lycopersicella
- Gene Symbol
- -
- Assembly
- GCA_029255805.1
- Location
- JARACZ010000003.1:22020224-22022938[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.7e-10 3.7e-07 30.6 0.0 1 38 26 63 26 69 0.94
Sequence Information
- Coding Sequence
- atgaagaaaaaagaaaaagaagttaaGAATAAGAAATcaagacaaaaaataaaaaaaacgaaacgAAGACAATATAGCGAGGAAGATATAAAAAAGGCATTAGAAGCGATCAAAAATGGCATGGCCAAAAAGCAAGCCGCCAAACAATATCAAGTTCCTCGAGCAACTTTGCAATTTCGTGTCAAGAAACCAGACCATAAGCTTCAACCTGGCCCAAGTCCGGTACTGACGGAAGAAGAAGAAACCAAATTGAAAAATTGGCTAAATGTTAGTCACAGAAAAGGTTTTCCCAAACGGAAAGAAGATCTCTTGAATAGCGTATcagaatttgtaaaaaaaagcgGTCGCCCAAATCCATTCAAAGACAACATGCCCGGAGAAAAATGgtttaaactatttttaaagCGACACCCGGATATTGCTATAAGAGTCCCAGAAGCCGTAACAGCAGCCAGTGCTGCAGTATCAGAAAATGATATAAAAGGATGGTTTCAAGCCATTGAAGTCTATCTGAAAGATCACGGCTtgtttgatattttaaatgatccAAAAAGAGTTTTGAATGGTGACGAAACCAACTTTGTTCTTTGCCCCAAGACAGGTTTGGTCTTGGCACCAAAGGGTGCCAAAAACGTGTATGAAATTGACAACGCTCCAGCTAAAAGTTCATTAACTGTAATGTTCACATTTGCTGCTAATGGTGAAACCACCCCACCTATGGTAATTTTCCCGTACAAGCGCTTGCCAGGTGATATTGGCGCAAAGATACCATCAGACTGGGGTATAGGCCTGACTGATAATGGTTGGATGAAAGCAGAGGTGTTCTGTCAATATATTGAGAAAGTGTTACATCCGCATCTCGTAAAAAACCAAGTACCATTCCCGGTTATCTTATTTGTAGATGGTCATAAAACGCACCTCACTTATGACGTCAGTGAGCTTTGCTCCTCATTGGATATTGTGCTTATAGCGCTTTATCCCAATTGCACACGACTACTTCAGCCTGCAGATGTCTCGGCTTTTAGACCTCTTAAAGGTGGTTGGCAAAAGACAGTCTTAGAGTGGCGGCGTGACAACCCATCTCAAGCTctcacaaaagttgattttGTGCCCCTGTTGCAAAAAACAATTGATAAATGCATAAAACCAGATACAATTATCAATGGTTTTCGGGCTACTGGCCTTTGTCCATGGGATGCAAATGCTGTAGACTACTCAAAATGCTTAGGTAAGAATTTGAAGAAGCCCGAAAATGAAGCAATCCCTGCATCTAATAAAATGATGACGAAAGATGATTTTTTGCGATATGCAGGACAGCCCACAATAACAAAACTTTTAAACAAGCATGTTTTGACCGAGACTgagcaaattttaaaaaatatatggctTTTCTTTGACGGAAACGAAAACCATCAAACAGAGAAAGAAAACTTTGAAGACAGAGAAGTAAGGAATGAGAACTTTGATACCGgcgaaaaaaacaacaacaacaatagAGAATTATATGAGACAAATCCTATGGATGTTGAAAATATGGAAATTATTATGAGTGACGAATTGGATAAATCATCTAATATTCCTCAAACTGAAGAAAAAGAAATAGGAGCAGGAAAACTGAATGAGGAATTTAATGTtaaagaaaaagacaaaaacaGAAATGAAGAACATTACATGGACATTGAAAATATGGATATTATTATGTGTGATGAATTAGATACGTCATGTAATCTAACTATTGCTGAAAACATTGTTATTGAAGAGATTGTCAGTGAccaaaaagaaacaaatgaaaACATAGATTGTAACACAAATGATTCTGAAGCatgtcaaaatataactttcaaagCACAAATTGAACCGtataaagaaacaaaacaatGCAAAATTAGTAAACCAATTGCTTTACCTCATATAGCCGTCCACTCAaatcaaaaaaaatttgataaaattgaaatattggaAACTGAAACTAATCCAACATTTAAAACTCCTATTAAAACAAACCTACGAGAAATGAAGCTAGATGACGTATTAGTACTACCGAAAACACCTCAAAGAAAGGGAGTGAGACAAACTAAGAGGACACCATATGTTATTACATCAAAAGAGTTTAaggaagaagaaaaaaagaaaataatagcgaaaaaagaaaaagaagaaggcaTACAAAAACGTAAGGAACAacgacaacaaaaaaaaaatgaaaaattactaaaaaatgaaaaaagagttctcaaaaaaaattatactattGAATCTGTCAAAAGAAAATTACTTTCGGATGAATTAAACATTGCAATAGaacatgaacaaaaagaaaagaaagatgaaaataaagtaaattttgtaCAAGAACGAAGCACCAAAGAGAAAAGggaaattaataaagaaaatatcacTAAAAATACTCCTAAGGAAAGTGTTGTATTAaacagtattaaaataaaaacagaaaaatgtaaCGCTAAGAATAAGATAAAACATGGAACAGTTGAAATTGTGACAGAGAAAGAACAAAACAAACCAAAGAAAGAGACAAAGAAAGACAAACCAAAGAAAGAGAATAATGAACGTATTACATTGAAGAATATTTTATGTTCTGAAGAACCATTTTGCAGTACGGATGAAGATGAGAAGTCTGATGATGATGGTAACATCAAACGTAAGATAAAGTTTAGCATTAGTGAAATTGAGAAGATGTTGACTGAAACTTAG
- Protein Sequence
- MKKKEKEVKNKKSRQKIKKTKRRQYSEEDIKKALEAIKNGMAKKQAAKQYQVPRATLQFRVKKPDHKLQPGPSPVLTEEEETKLKNWLNVSHRKGFPKRKEDLLNSVSEFVKKSGRPNPFKDNMPGEKWFKLFLKRHPDIAIRVPEAVTAASAAVSENDIKGWFQAIEVYLKDHGLFDILNDPKRVLNGDETNFVLCPKTGLVLAPKGAKNVYEIDNAPAKSSLTVMFTFAANGETTPPMVIFPYKRLPGDIGAKIPSDWGIGLTDNGWMKAEVFCQYIEKVLHPHLVKNQVPFPVILFVDGHKTHLTYDVSELCSSLDIVLIALYPNCTRLLQPADVSAFRPLKGGWQKTVLEWRRDNPSQALTKVDFVPLLQKTIDKCIKPDTIINGFRATGLCPWDANAVDYSKCLGKNLKKPENEAIPASNKMMTKDDFLRYAGQPTITKLLNKHVLTETEQILKNIWLFFDGNENHQTEKENFEDREVRNENFDTGEKNNNNNRELYETNPMDVENMEIIMSDELDKSSNIPQTEEKEIGAGKLNEEFNVKEKDKNRNEEHYMDIENMDIIMCDELDTSCNLTIAENIVIEEIVSDQKETNENIDCNTNDSEACQNITFKAQIEPYKETKQCKISKPIALPHIAVHSNQKKFDKIEILETETNPTFKTPIKTNLREMKLDDVLVLPKTPQRKGVRQTKRTPYVITSKEFKEEEKKKIIAKKEKEEGIQKRKEQRQQKKNEKLLKNEKRVLKKNYTIESVKRKLLSDELNIAIEHEQKEKKDENKVNFVQERSTKEKREINKENITKNTPKESVVLNSIKIKTEKCNAKNKIKHGTVEIVTEKEQNKPKKETKKDKPKKENNERITLKNILCSEEPFCSTDEDEKSDDDGNIKRKIKFSISEIEKMLTET
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00844269; iTF_00844270; iTF_00844271; iTF_00844272;
- 90% Identity
- iTF_00844272;
- 80% Identity
- -