Basic Information

Insect: Kallima inachus
Gene Symbol: -
Assembly: None
Location: HiC:3647107-3652897[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00085 0.078 13.8 0.0 1 23 221 244 221 244 0.94

2 10 7.1 6.5e+02 1.5 0.3 2 23 270 292 269 292 0.90

3 10 0.0021 0.19 12.6 1.1 1 23 315 337 315 337 0.97

4 10 3e-07 2.7e-05 24.7 1.5 1 23 341 363 341 363 0.99

5 10 0.00061 0.056 14.3 3.5 1 23 368 391 368 391 0.97

6 10 0.012 1.1 10.2 0.4 3 23 400 421 398 421 0.93

7 10 0.0043 0.4 11.6 2.7 1 23 427 450 427 450 0.97

8 10 7.7e-06 0.0007 20.3 2.6 2 23 457 478 456 478 0.96

9 10 3.6e-07 3.3e-05 24.5 1.9 1 23 484 506 484 506 0.98

10 10 0.00018 0.016 16.0 4.4 1 23 512 534 512 535 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00085	0.078	13.8	0.0	1	23	221	244	221	244	0.94
2	10	7.1	6.5e+02	1.5	0.3	2	23	270	292	269	292	0.90
3	10	0.0021	0.19	12.6	1.1	1	23	315	337	315	337	0.97
4	10	3e-07	2.7e-05	24.7	1.5	1	23	341	363	341	363	0.99
5	10	0.00061	0.056	14.3	3.5	1	23	368	391	368	391	0.97
6	10	0.012	1.1	10.2	0.4	3	23	400	421	398	421	0.93
7	10	0.0043	0.4	11.6	2.7	1	23	427	450	427	450	0.97
8	10	7.7e-06	0.0007	20.3	2.6	2	23	457	478	456	478	0.96
9	10	3.6e-07	3.3e-05	24.5	1.9	1	23	484	506	484	506	0.98
10	10	0.00018	0.016	16.0	4.4	1	23	512	534	512	535	0.96

Sequence Information

Coding Sequence: ATGGAACTTCAGAAAATTTGCCGGTGCTGTTTGTCTGAAGGTGCAAATAAAGATATGACTGCAAGTTACCCTTGGTTGGGAGAAAAAGAGATGTATTCTGACATGTTACAAGAATGTTTTAACATAGTTTTAAGTACCAAGCTGGAGTGTAATGCAATATGTAATATTTGTGTGAATAATCTACGGGAATCCTTATACTTCAAGCGACAAGTGCTCCAATCGGAAGCTGATTTCCTGAAAAGGATTGCGGATGCAGAAAATGAAAAACCAGTCCATGTGAAAGAGGAATTTATTATTGAGACTGATGAGTCTGATAATTATTTCTTGGACGATACAATCAAAGAAGAGTCACCCCCGCCTCCGCCAGTGACAAAGAATAAATTAAATACTATAAACACAACAAAAAGCAATAAAGAAATTAAATCGCTGGACAATAAACTAACTTCCATCAATTCCCGAGGAAAACCAGAAATAAAACAGACAAACACAAAAGAACTAAAAATAGTTAAAAAAAGGAAGATAACATTGAAAAATGATGTAAAAATAAACATCTCCTGGACAACAAGAAATGTTCACGACAAGAGTAAGCATCGAGAGAACCTTTTAACACTATTGAAATATTCAAATGTTATGCCATTCAAGAATAAATCATTACTCGGCTTCATGTGTGGGTACTGCGATGCTACCTATCCAGACCCTATGGACTTACGAGTGCATACAGAGAATGATCATGAAAAGGTACGGCTAGAATTCAAATCATCATTCGATATGACCGAATACAATGTCAAATTAGACGTCACAGATCTATCATGCTTATTATGCTCTGAGAAAATGGATAACCTCAATAAGCTAAAGGATCATCTCGTCAAAGTTCATGATAAAACATTCTACAATGATATAAAAGATCACATCATGCAATTTAAGCTAAAGAAAGGAGATGTATTTGACTGTGCAATGTGTCCTTCCACGTATGAAACGTTTAAAATGTTGAAACAGCACATGAATAAACATTATAGCAATTATAGTTGCACAAAATGTGATACATCGTTCGCTACGAAGAGATCTCTGAACGCTCACCAAATGACACACCAAGAAGGCAGTTTCAAATGTGATCTATGCGACAAAGTATTCTCGAGCAGAACAAAGAAACAATATCACGAGAAAACCAAGCACTTGGGAGCGAGAAATATAAGCAATTGTCCGTTCTGTGACGTCCCATTCAGAAGTTACTACCAACGGAACCAGCATTTAGTTAAAGTTCACAATTCTGAAGCACAATATAAGTGTAATGTGTGCAATAAGGGTTATATATTGAAATCATTGTTAATGTGTCACATAAAGAAGAATCATTTGATGGAACGTAACTGTCAGTGTACGGAATGTGGTTATAGGTTCTTCAGTAAGAAAGCGTTGAACGCTCACATGATCAAACACACCGGAGAGAGAAAATATGCTTGTGAGGTCTGTCACAAGTCGTATGCAAGGAAGTATACATTGAGGGAACATATGAGGATACATAATAACGACAGACGATTTAAGTGTGAAGTGTGTAGCACAGCATTTGTGCAAAAATGCAGTTTAAAAAGTCATCTGTTGTCACATCATGGTATAAGTATGGCTGCCAGCGATATTCCTATATCATAG
Protein Sequence: MELQKICRCCLSEGANKDMTASYPWLGEKEMYSDMLQECFNIVLSTKLECNAICNICVNNLRESLYFKRQVLQSEADFLKRIADAENEKPVHVKEEFIIETDESDNYFLDDTIKEESPPPPPVTKNKLNTINTTKSNKEIKSLDNKLTSINSRGKPEIKQTNTKELKIVKKRKITLKNDVKINISWTTRNVHDKSKHRENLLTLLKYSNVMPFKNKSLLGFMCGYCDATYPDPMDLRVHTENDHEKVRLEFKSSFDMTEYNVKLDVTDLSCLLCSEKMDNLNKLKDHLVKVHDKTFYNDIKDHIMQFKLKKGDVFDCAMCPSTYETFKMLKQHMNKHYSNYSCTKCDTSFATKRSLNAHQMTHQEGSFKCDLCDKVFSSRTKKQYHEKTKHLGARNISNCPFCDVPFRSYYQRNQHLVKVHNSEAQYKCNVCNKGYILKSLLMCHIKKNHLMERNCQCTECGYRFFSKKALNAHMIKHTGERKYACEVCHKSYARKYTLREHMRIHNNDRRFKCEVCSTAFVQKCSLKSHLLSHHGISMAASDIPIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00985435;
90% Identity: -
80% Identity: -