Kina016995.1
Basic Information
- Insect
- Kallima inachus
- Gene Symbol
- -
- Assembly
- None
- Location
- HiC:3766625-3783231[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.19 18 6.4 1.5 1 23 225 248 225 248 0.96 2 19 3.1 2.8e+02 2.6 0.4 2 20 273 291 272 295 0.88 3 19 0.072 6.6 7.8 5.9 1 23 314 336 314 336 0.98 4 19 0.0052 0.48 11.4 3.2 2 23 341 362 340 362 0.96 5 19 0.0004 0.036 14.9 0.3 1 23 367 390 367 390 0.97 6 19 1.1 1e+02 4.1 1.5 2 23 396 418 395 418 0.93 7 19 0.00049 0.045 14.6 1.8 1 23 424 447 424 447 0.97 8 19 3.1e-05 0.0028 18.4 2.0 2 23 453 474 452 474 0.97 9 19 0.00032 0.029 15.2 3.2 1 23 480 502 480 502 0.98 10 19 0.19 17 6.5 0.9 1 23 619 641 619 641 0.97 11 19 0.11 10 7.2 0.6 2 23 668 690 667 690 0.95 12 19 0.0022 0.2 12.5 1.8 1 23 711 733 711 733 0.98 13 19 0.0038 0.35 11.8 2.5 1 23 737 759 737 759 0.97 14 19 4.8e-05 0.0044 17.8 0.2 1 23 764 787 764 787 0.95 15 19 0.18 17 6.5 1.3 1 23 793 816 793 816 0.90 16 19 1.4e-06 0.00013 22.6 2.0 1 23 823 846 823 846 0.98 17 19 0.00036 0.033 15.0 3.6 1 23 852 874 852 874 0.98 18 19 6.9e-07 6.3e-05 23.6 1.7 1 23 880 902 880 902 0.98 19 19 0.28 25 5.9 0.4 1 17 908 924 908 925 0.92
Sequence Information
- Coding Sequence
- ATGGCTCTAAAAGATAATTTTTCTGACTGGATTTCACAGCCGAACGTTTGTAGATGTTGTCTATCAGCTAGCGGTATTTGGGATTTAACCGCAGTATATATAACTGAAACTGGAAGTAAAGAAATGTTTGCCGATATACTTCGAGACTGCTTAGGAATTACTTTATCACATATAAATGAGATAGGCTCCAGTAAGCTTGTATGCGAGTTTTGTGTGAACCAGCTCCGTAGTACTTCGAACTTTCATAAACAAGTTATAGATGCTGACAGATGCTTTTCTCAATACTGTGACAGAAAAGATATTGATAATAAATCGAGTTTAGACAATTATAAAAGTAGTAAAAAGACTGTTTATAAGAAAGAAGTAACACAAAATGCCACAAACAGTGATAATGACTACGACTCTGATACACCAATAGCAAAAATTAAACATTCTCTTTATGACAATGATAGATTTATAAATTCAGATTCCGAAGGTTATGAAAATTGTGAGTTAAAGGAGAATATACTACAAAAATGCGACGAGAAGATAAATTATTTAACAAGAGAACAAGCTACCGGAAAACTAAGAAATAATATCAAACAAGTATCCGAACGCAAACGTGTAATTTTAACCTGTGGAACAGTATTACGAGAAACGACTGCTTGCCCCTTCCGCCACCACAAAAGCTGGTTCCAATGTTTCTTCTGCTCTCAAGACTTCATGGAAATCGATTCATTAAGGAATCACACAAACCAATCGCATCCGGACATCGAGACCGAATTAAAAAATATAAAACGTTACCCCCGTTCCCTCCAAATCGACATTTCGAATTTGGAATGTCGCAACTGTCATTTGATTTTGACAGATGTCGAAAGTATGAAACGACATTTTGTCGAAATACACAATAAACTTATTTACAAAGAATGTATAGCTGATTATAAAGTAAATTCTAGTCCGTACACTTGTCATCTATGCAAGCGCGAGTTCCACGTATTTAGGACGTTAACGACGCACTTGAACGAACATTACGCGAACTGTATATGCGATGTGTGTGGGAAATCATTCCTAAACACAAAGCGTCTTAAGGTCCATAAACGCACGCACGAAAACGGTTCGTATCCTTGCAAGGAATGTGGGAAAATTTTAAAAACTAAAACTTCTAAAGCTAATCATATGGAGAGCGCTCATTCTAAGCGTATAATAAAGTGTCAAATTTGTTTTAAACCTATGAAACATTACAACGATAGAATAAAGCATATGTCTGAAGTCCACAACATTACGCACAAATTCAAATGCCCTATATGCAGTAGGGAGTATAATATAAAGCATTATTTAGCGACACACATACGTCAAACTCATGGGCACAAGAATAAAAAATGTTTAGAATGCGGTATGGCGTTTATTACAAATCATGGGTTGAAAAAGCATATGTCGAAACATACGGGAGAGAGGCCGTTCTCTTGTACTATATGTTGTAAGTCCTATGCAAGGAATTACACATTAAGGGAGCATATGCGGGCTCATGAAAGTGATAAGCGTGTTCTTTCCACAAACTCTAAAAAGAGCACTCTAATATGTACATCATGCATCCTGCGCTTACGGGATGCAAGTAACTTTAAAAAGATGGTACTTGAGGCTGAACGGAATTTGCATATCTATGATGTAAACCAAGATAATTCTGTAGTACAGTTACAAAACATAAAACCAGATGACCAAGAACAAATAGTCGAAATAAAAAATGAGAAATCAGAAGTGAATTCAGAATGCAGTGAATTTGAACAAAATGAAGCTATTTCAGACACAGATGGTTTATTCGAAGAAGATACAGAAAGTTCGAACGCGACACCTTTCAAACCGAAACACCAGGCTGGTTTCCCTTGCTTCTACTGCAGGATGATATTCGACGATGTATTAAAAATGAGGGAACATCAACAGAAACACACCAAAACAGAACTAAAACGAGTTCTAAGGTCGTATGGCGCGGAAAACTTCATTGTATACGTCGATATTACAGATTTAAAATGTACAATCTGCAATCAACTCGTTCAAAATTTAAACGAATTGAAAACACATTTAACGAAAGAACACAAAAAGAAAATGCAAGAATATCCCGATCGTGTCGTCCCATTCAAACTAACACCGGGTATTTTCGAATGTCAAGTCTGTAAATGTAATTTCGAAACGTTCGGCTCAATAGAACGTCATATGAACGTCCATTTTAGGAACTACGTTTGCAAAGAGTGTGGAACTGGTTACGTAACGAAATGTCGGTTGAAAGTGCACTCTAAACAGCATATAGGTGGTAGTTTTCCATGTGAAACGTGTAAAAAAGTTTATTCGACTCCTATTAAATTAAAGAATCACATAGACGTCGTGCACAAAATGATAAAGAGGTTCAAATGTGCGAGATGCGATGAACGTTTTACAGAATATTTTAGGCGGCAAAAACATATGGTCGAAGTACACGGTGTTGCCCCATTAGAATATAAGTGTAATGTCTGCGAGAAATCATTCGATCGTAAATATATGCTCTCGATGCACATGAAAAGAGATCATTTAGAAGAAAGAGATTATCAATGCGAAATGTGTTCCTACACTTGTTTCACTAAGAACGAACTAAAAGTACACATGATAAAACATAATGGTGAACGAATTTTTGAATGTACGGTATGCAAGAAGTCATATGCAAGGAAAAAAACGCTTAGAGAGCACATGCGGATACATAATAATGACAGACGGTACGCGTGCAAAGCATGTGGACAAGCGTTTGTGCAGAATTGCAGTCTGAAAGTTGTGCACAAATGGCAGGACGTCGTTGATCTGTTCCTCGTGTATCCAAAAGTTAAGAGAAGCAAGCAGCTTCCGCATGATGGTGTGGGAGAACCGCATATTGATACTGACATTAAAGAGGAAAAACTATCTGAAGTTAAAAGGGAACAGAATGAATCAGATGAAAATATTGATGATGATGACTTTTTAGATAAATATGATG
- Protein Sequence
- MALKDNFSDWISQPNVCRCCLSASGIWDLTAVYITETGSKEMFADILRDCLGITLSHINEIGSSKLVCEFCVNQLRSTSNFHKQVIDADRCFSQYCDRKDIDNKSSLDNYKSSKKTVYKKEVTQNATNSDNDYDSDTPIAKIKHSLYDNDRFINSDSEGYENCELKENILQKCDEKINYLTREQATGKLRNNIKQVSERKRVILTCGTVLRETTACPFRHHKSWFQCFFCSQDFMEIDSLRNHTNQSHPDIETELKNIKRYPRSLQIDISNLECRNCHLILTDVESMKRHFVEIHNKLIYKECIADYKVNSSPYTCHLCKREFHVFRTLTTHLNEHYANCICDVCGKSFLNTKRLKVHKRTHENGSYPCKECGKILKTKTSKANHMESAHSKRIIKCQICFKPMKHYNDRIKHMSEVHNITHKFKCPICSREYNIKHYLATHIRQTHGHKNKKCLECGMAFITNHGLKKHMSKHTGERPFSCTICCKSYARNYTLREHMRAHESDKRVLSTNSKKSTLICTSCILRLRDASNFKKMVLEAERNLHIYDVNQDNSVVQLQNIKPDDQEQIVEIKNEKSEVNSECSEFEQNEAISDTDGLFEEDTESSNATPFKPKHQAGFPCFYCRMIFDDVLKMREHQQKHTKTELKRVLRSYGAENFIVYVDITDLKCTICNQLVQNLNELKTHLTKEHKKKMQEYPDRVVPFKLTPGIFECQVCKCNFETFGSIERHMNVHFRNYVCKECGTGYVTKCRLKVHSKQHIGGSFPCETCKKVYSTPIKLKNHIDVVHKMIKRFKCARCDERFTEYFRRQKHMVEVHGVAPLEYKCNVCEKSFDRKYMLSMHMKRDHLEERDYQCEMCSYTCFTKNELKVHMIKHNGERIFECTVCKKSYARKKTLREHMRIHNNDRRYACKACGQAFVQNCSLKVVHKWQDVVDLFLVYPKVKRSKQLPHDGVGEPHIDTDIKEEKLSEVKREQNESDENIDDDDFLDKYD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -