Basic Information

Insect: Kallima inachus
Gene Symbol: -
Assembly: None
Location: HiC:7745719-7750931[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00035 0.032 15.1 1.4 1 23 187 210 187 210 0.91

2 12 0.00026 0.024 15.4 4.9 1 23 214 236 214 236 0.95

3 12 0.00022 0.021 15.7 1.8 1 23 252 274 252 274 0.97

4 12 0.00026 0.024 15.4 0.6 1 23 280 302 280 302 0.97

5 12 7.7e-06 0.00071 20.3 0.2 1 23 309 332 309 332 0.97

6 12 1.7e-05 0.0015 19.2 1.1 1 23 338 360 338 360 0.98

7 12 4.1e-06 0.00038 21.1 1.1 1 23 366 388 366 388 0.98

8 12 0.00029 0.026 15.3 2.3 1 23 398 420 398 420 0.98

9 12 6.4e-06 0.00058 20.5 1.7 1 23 426 448 426 448 0.99

10 12 0.016 1.5 9.8 5.9 1 23 454 476 454 476 0.93

11 12 0.0007 0.064 14.1 4.6 1 23 513 536 513 536 0.96

12 12 4e-05 0.0036 18.0 2.3 1 23 541 564 541 564 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00035	0.032	15.1	1.4	1	23	187	210	187	210	0.91
2	12	0.00026	0.024	15.4	4.9	1	23	214	236	214	236	0.95
3	12	0.00022	0.021	15.7	1.8	1	23	252	274	252	274	0.97
4	12	0.00026	0.024	15.4	0.6	1	23	280	302	280	302	0.97
5	12	7.7e-06	0.00071	20.3	0.2	1	23	309	332	309	332	0.97
6	12	1.7e-05	0.0015	19.2	1.1	1	23	338	360	338	360	0.98
7	12	4.1e-06	0.00038	21.1	1.1	1	23	366	388	366	388	0.98
8	12	0.00029	0.026	15.3	2.3	1	23	398	420	398	420	0.98
9	12	6.4e-06	0.00058	20.5	1.7	1	23	426	448	426	448	0.99
10	12	0.016	1.5	9.8	5.9	1	23	454	476	454	476	0.93
11	12	0.0007	0.064	14.1	4.6	1	23	513	536	513	536	0.96
12	12	4e-05	0.0036	18.0	2.3	1	23	541	564	541	564	0.95

Sequence Information

Coding Sequence: ATGACCGAAATTTTGAATTTAAACGCACTATGTCGGTGTTGTTTTGCTGATGGGAATTTCAGTGATCTAAATTCAACTTGCGATATTATGGGTTATGCTGAAATATTCACGGATATATTAAAAGATACCTTTGGTATACACCTACACTCACCGTCTATTAATGTTAGCAATACAATATGTAATCAATGTATAAAACACTTACGAGATGGTGCTATATTCAAGAAACGAGTATTGGATTGTGAACAGAAGTTTCAGGAATATTGTAAAAATAATGGCGTTATGGCGAAAATGGAAATAACTTTGAAAGATGAACGTGAAAACGTTTTAGACAACGATGAAACTGTTTCGGATAACGACGCGTTTATTTCAGACAATGAGATCGTCTCAGATAACGAATATGAAATGAAAAACGGCATACTAACAATTGATGTTAAAATCGAGCCTCAACACAGCAATCAAGAAAATAATGCGAGTGAAGAACACAATGAAGAACGATGTAGGAAGCCAAAGGATCAATCCACAACACAGGGTTTTCGGCACAGAAAAAACGATTGCGAATATTTGTGTAAATTATGCAAAATAAGTTTTACAAATAAACAATTATTAAAAGCACATAAATCAGAAAACCACAACCCGTTACACATTTGCAAAATTTGTAATATTCGATTCAAAAGAAACACAACATACAACAAACACATGTTCAATCACTCCATATGCGTGACACCGACAATTCCTCTCGCACAAATAACGGCATTCGATTGTAAAATGTGCAATAAAAGTTATAACACAATAAACAAATTACGCGAACACAGAAACATACACACGAGAGATAAGGTATACATTTGTGATTTGTGCAAAAAGGAATTCGTTTACAAAAATTCAATAAGAAAGCACATTCTCTGGCACACAGGACGCAATAAGCAATACATGTGCGACACGTGCGGGAATTCATTCAACGATATAACCAATTTGAATAAACACATCATAACAGTTCACGAGAAATTGAAACTTTTCAAATGTACCCTCTGTTCTAAAGAATTCGCCGCGAACAAAACGTTAAAAGTGCACATGCGTCTCCACACAGGAGAGAGACCGTATAAGTGTGATATGTGCGAAAAAGCATTCATAAATTCCAAAAATCTCGCCAATCATAAAAGCAAACATGAAATGAAGATAAACTTCGGCGGTATATACATATGTAAGACATGCAAAGCGCCCTTCGATCATCGCGGTCTGTACACAACACATTTACGCACTCACTTAACGGCTAAATTGTACAAATGTACACAGTGCTCAGAGGATTTCACGACGGGTTATTCGTTGAGACGTCATATGGAAACGCATATAAGCGTTAAGAATTATTCCTGCGACAAATGCGACAGGAAATTCACGACCACGTCCAAGTTGCGGTGTCATGGCAAATATCATGATCCGAGGAGGATTAAGAAGATGAAAATAGAGAAAATAAATTGTAAATTGTGCAAGAAATCTGTGACAGATATCAATAAGCATATGAAAGCACATTATAACAGACGACATCAATGCGACTTCTGTGATAAATCATATTCCGAGAGGAATACGATGAACCGCCACATAAAACAGTGCCATGATGGGCTACGCCATGAATGTGATGTGTGCGAGAAAAGTTTTGTAAATACATCGAGTTTAAAAACTCATAAAATAAAATATCATAATATTAAAATAATGAAAAGTAAAGTAGAAGAAGAGTGA
Protein Sequence: MTEILNLNALCRCCFADGNFSDLNSTCDIMGYAEIFTDILKDTFGIHLHSPSINVSNTICNQCIKHLRDGAIFKKRVLDCEQKFQEYCKNNGVMAKMEITLKDERENVLDNDETVSDNDAFISDNEIVSDNEYEMKNGILTIDVKIEPQHSNQENNASEEHNEERCRKPKDQSTTQGFRHRKNDCEYLCKLCKISFTNKQLLKAHKSENHNPLHICKICNIRFKRNTTYNKHMFNHSICVTPTIPLAQITAFDCKMCNKSYNTINKLREHRNIHTRDKVYICDLCKKEFVYKNSIRKHILWHTGRNKQYMCDTCGNSFNDITNLNKHIITVHEKLKLFKCTLCSKEFAANKTLKVHMRLHTGERPYKCDMCEKAFINSKNLANHKSKHEMKINFGGIYICKTCKAPFDHRGLYTTHLRTHLTAKLYKCTQCSEDFTTGYSLRRHMETHISVKNYSCDKCDRKFTTTSKLRCHGKYHDPRRIKKMKIEKINCKLCKKSVTDINKHMKAHYNRRHQCDFCDKSYSERNTMNRHIKQCHDGLRHECDVCEKSFVNTSSLKTHKIKYHNIKIMKSKVEEE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -