Kina016655.1
Basic Information
- Insect
- Kallima inachus
- Gene Symbol
- -
- Assembly
- None
- Location
- HiC:3614839-3642049[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.001 0.096 13.6 3.2 1 23 220 242 220 242 0.95 2 15 0.0015 0.14 13.1 1.2 2 23 313 335 312 335 0.95 3 15 6.3e-05 0.0058 17.4 1.7 1 23 340 363 340 363 0.96 4 15 0.0016 0.15 13.0 0.6 1 23 368 391 368 391 0.96 5 15 0.0042 0.38 11.7 2.7 2 21 394 413 394 416 0.95 6 15 0.0056 0.51 11.3 3.2 2 22 424 444 423 444 0.96 7 15 0.012 1.1 10.2 0.5 1 21 497 517 497 520 0.90 8 15 2.3 2.1e+02 3.0 0.1 3 23 549 570 547 570 0.92 9 15 0.00085 0.078 13.8 0.1 2 23 593 615 592 615 0.96 10 15 3.1e-05 0.0028 18.4 0.2 3 23 622 643 621 643 0.94 11 15 0.0073 0.67 10.9 2.7 2 23 648 670 647 670 0.94 12 15 0.0012 0.11 13.4 4.0 1 23 675 698 675 698 0.97 13 15 3e-06 0.00028 21.6 5.2 1 23 702 725 702 725 0.98 14 15 0.0002 0.018 15.9 0.3 2 23 732 753 731 753 0.96 15 15 5e-05 0.0045 17.7 0.6 1 23 759 781 759 781 0.97
Sequence Information
- Coding Sequence
- ATGGAGTTTAATGAAATTGTAGTGAAAGAGAGCCCGGGGCTTTGCCGGTGCTGTCTTTCTGAAGGTTGTTATAAAGATTTAGGAACGGAGTATACATGGATGGATGATACCGAAGTTTACGCTGATATGCTGTTAGAATGCTTTGATATAAGTGGCCCAAACGGACCGAACCGCCTCATCTGCGAGGTTTGCATCACACGTCTCCGTGACGCGTGTAACTTCAAGAAACAAGTCCTTGACTCGGAGAAGAAGTTTGTCGATATGGTCGGTAGAGGCGAGTTCAAGTCTAAAGTTATGCTTTACCAGGAGGAAATGAAAGCTGAATTGGTTTTGGAACCACAGCCAGCCGATGAAACTGAAGTTGAATACTTGGATGAAGACATTGATTATGACGATGGTAATAAAGATGAATCAAACGAACCGTCCGTATCAGAAGATATAACAGTTGAGACTTTACCAATCAAAGGCAAACGAAAACGGACTAAAAAGCCAGCAGTCAAACCGGAAAAGAAAAAAGCCAAACTAGAGGAGAAAGCTAAACCAAAAATTGTCAAAGATGAAGGGCCGTACGACCACTGTACTTCTGAGCGGAGAAGGAAAAACTTGCAAATACTGTTCAACAACACATCAATAATTCCTTTCAAATGGCGGGGCAGGTATCTCTGTTTTTATTGCGGCAAGAACTTCACAGAATATACAACATTCAGAAAACATACAAAGGCACACGGTCTATGTAGCACGAGCGATTATGCATTAAAAATTATTAAGGGCAATCATGTAGAAATAAAGATTGATATATCTGAAATTCTGTGCGAAATATGTTACGAGCCTTTGACTAGTTTCAACGAAATTATAGATCATTTGATAGGGAAACATGAAATGGAATACGATAAAAGCATCTTTACACCGTTCCAAGAATATAGATTGGCTGATTGTCGATGTCAATTATGCGGCCAAGAGTTCACATATTTTGGTTATCTTATCAGTCACACGAATATTGCTCACCCGCAAAACAGTTTCATATGTGATAACTGCGGTGAGAGGTTTAATAAGAAAAGAGATCTGGCGATGCATATACGACATTACCATAGAGAAGGCGGCTACCCATGTGACGAATGTACAGAAATATTTGAAACGTATCTGCTTTTACGAAAACATAGAAACAATTTTCACTTTAGACGATGTAAAATGTGCGATTTACGTTTTCCGTCTTACACGCTTCTGCAAAAACATATTAAGTGTGATCATCCCGATGACGGCTGTTACAAAAAATGCCCTCACTGTTCCAAAATATGCCAAACTTCTCAAGGTTTAAACCAGCACATTAGAAAGTGCAAACGCAAAAAACAAGTCAAAATTACGACAACAACTTTTCCAGATGATAATTTGTTACAACCGAATAAGAAACAAAATGTGCAGCAAATTAGAAGGAATATTCAATGCGTCTTAAATATGTCGACAGCTGTGCCTTTTAAATTCTTCGCAAAATACTCTTGTTTCTATTGTTCTAAATACTTCGTAGAATTTGACGAGCTCAAAGAACATGTTGTCGCTGAACATCCGATATGTGATTTAAAAGAAAAATGCATGAAAAATTGTAAAGGCGAAAGAATAACTGTCAAAATCGATATATCTTCACTAGCTTGTAGAGTCTGTTTTCAACCAATGGACAATGTGGACAATCTTATTGACCATCTCATAACAAAACATACCGCTGATTACGATAAATCAGTGACAGGATGTTTTGAACCGTTTAGAATAATTAAAGACAATATTCCTTGTCCAATGTGTTCGAATGTGTTTAGATATTTTGGTACACTTTTAAGGCATATTAACTCTGAACACAGTAACAATAACAAAATATGCGACTTCTGTGGTCGCAGTTTTAAGAATGTTGCAAATTTAAAAGTGCACATCACTTACGCGCATACTGGATCTTGTGAGTGTGAAATTTGCGGTGCTAAGTATAAGAATCAGTGGTGTTTAGGACGGCATAGAGCAAAGTCGCATAACGCTAAAGATTTTCAGTGTACGAAATGTCCAGAAAGATTTCAATCCCAATACCATAAACAGAAACATTTGATAAAAGTTCACGATATAGGTCACAAATGCACGTATTGTGGAAAGATGTTTACAAGAAACTCGTTTATGAAGGATCATATACGTAGGACACATTTAAAGGAAAAGAACGTGCCGTGTACGGTATGCAATGAGAAATTCTTCGATAATTACTTATTGAGAATGCATATGGTAAAGCATAAAGGCGAAAGAAAATTTAGTTGTGAGGTGTGCGGTAAAGCGTTCCTTAGACGAAGCAATTTAAGTTCTCACAAGGAAATGCATAAGAAATATGGACATGTTTAA
- Protein Sequence
- MEFNEIVVKESPGLCRCCLSEGCYKDLGTEYTWMDDTEVYADMLLECFDISGPNGPNRLICEVCITRLRDACNFKKQVLDSEKKFVDMVGRGEFKSKVMLYQEEMKAELVLEPQPADETEVEYLDEDIDYDDGNKDESNEPSVSEDITVETLPIKGKRKRTKKPAVKPEKKKAKLEEKAKPKIVKDEGPYDHCTSERRRKNLQILFNNTSIIPFKWRGRYLCFYCGKNFTEYTTFRKHTKAHGLCSTSDYALKIIKGNHVEIKIDISEILCEICYEPLTSFNEIIDHLIGKHEMEYDKSIFTPFQEYRLADCRCQLCGQEFTYFGYLISHTNIAHPQNSFICDNCGERFNKKRDLAMHIRHYHREGGYPCDECTEIFETYLLLRKHRNNFHFRRCKMCDLRFPSYTLLQKHIKCDHPDDGCYKKCPHCSKICQTSQGLNQHIRKCKRKKQVKITTTTFPDDNLLQPNKKQNVQQIRRNIQCVLNMSTAVPFKFFAKYSCFYCSKYFVEFDELKEHVVAEHPICDLKEKCMKNCKGERITVKIDISSLACRVCFQPMDNVDNLIDHLITKHTADYDKSVTGCFEPFRIIKDNIPCPMCSNVFRYFGTLLRHINSEHSNNNKICDFCGRSFKNVANLKVHITYAHTGSCECEICGAKYKNQWCLGRHRAKSHNAKDFQCTKCPERFQSQYHKQKHLIKVHDIGHKCTYCGKMFTRNSFMKDHIRRTHLKEKNVPCTVCNEKFFDNYLLRMHMVKHKGERKFSCEVCGKAFLRRSNLSSHKEMHKKYGHV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01079244;
- 90% Identity
- -
- 80% Identity
- -