Basic Information

Gene Symbol
-
Assembly
None
Location
HiC:411565-412350[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.00021 1.7 9.1 0.0 5 30 4 29 1 34 0.91
2 3 0.0037 29 5.1 0.0 9 30 40 61 38 66 0.92
3 3 0.0037 29 5.1 0.0 9 30 72 93 70 98 0.92

Sequence Information

Coding Sequence
ATGGCGTCTATTCCAACAGCAAAGATAGCCAGGAGAGTCCGAGCGACGCTATTTAATATTAAAATTACTCCAGCATTATTTGCACCTTATCGCTTCCGCATCCTTAGTGGTCCTGCAAAGATAGCTAGGAGAGTCCGAGCGAGGCTATTTAATATTAAAATTACTCCAGCATTATTTGCACCTTATCGCTTCCGCATCCTTAGTGGTCCTGCAAAGATAGCTAGGAGAGTCCGAGCGAGGCTATTTAATATTAAAATTACTCCAGCATTATTTGCACCTTATCGCTTCCGCATCCTTAGTGGTCCTGGTCAGTTTGTTGGACAAAAGGATCATGTCTGA
Protein Sequence
MASIPTAKIARRVRATLFNIKITPALFAPYRFRILSGPAKIARRVRARLFNIKITPALFAPYRFRILSGPAKIARRVRARLFNIKITPALFAPYRFRILSGPGQFVGQKDHV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-