Basic Information

Gene Symbol
ct
Assembly
None
Location
HiC:1390751-1427730[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 5.4e-27 4.2e-23 81.5 0.0 3 70 228 296 226 302 0.94
2 3 4.2e-32 3.3e-28 97.9 0.0 4 77 628 702 626 704 0.96
3 3 7.8e-31 6.1e-27 93.8 0.0 3 75 831 904 829 908 0.95

Sequence Information

Coding Sequence
ATGATAAGTTATGAATTCATTGCTCAACTGGTAGAAGACGTGAGACGTCTCCAAGCGTCGCTTTCAGCACTGCAAGAAGCGCACGCACAGCAGCTGCAGCGGCTGGAAGAAAGGCTGGATGAGAAGAAACAACACATCGCTAGGCTCGAAGCGCGATTAGACACGCAACGGGACTATGACGACATTAAGAGAGAAATCAGCATGCTCCGTTTCTCGGAGCTGGGCCCTACCGAGAGGCCGCACTCACATTCACATCCTAAAGACATATTCGGATCACAGAATCATTTACTCCGGTCGATGGATTTGGGTCCAAGCGAGCGAGTAGAACGCAAAGAGGCGTTACGCTCGCCAGCTGCGCCCGCGCACCGCGACAGTTCCACCGAGCGCGAGCGCAGCGCAGAGAGACGAGACACCGGTGCCGACGAGTGGCCGAGCACACCACCCCCTCTCAACAACAACACCACGCACCACAACAACAACGGGCCGATCCCGTTGCCGCTGCCGCCGCCGAGCCCGTTTCGTTTCGAGGAGCACCGCCCGTACCGGTTCGCGGAGGACATGGGCCCTTTACCTCCCGGCGCGCTCGTGGGCCGCCTCGGAGACTCCCTGATACCCAAGGGCGATCCCATGGAAGCCAGACTGCAAGAGATGCTCAGATACAATATGGACAAATACGCCAACTCAAATTTGGACACCTTGCACATAAGCCGACGGGTGCGGGAGCTGCTGTCGGTGCACAATATCGGTCAGAGGCTCTTCGCGAAGTACGTCCTCGGCCTCTCGCAGGGGACAGTGTCGGAGCTGCTATCGAAACCGAAGCCATGGGACAAATTGACCGAAAAGGGGCGGGATTCGTACAGAAAGATGCACGCGTGGGCGTGCGACGAAGCGGCCATCATGCTACTGAAGTCACTTATTCCTAAAAAAGTTGGGACTAAAGATGGTTCTGCGGGTACAGGGTTCGGAAGACCAGAGGGCGAAGGCGACGAGCGCCTCGCACACATGCTCAATGAGGCTTCCCACATGATGAAGACCCCTACCGGTCAGCCCAACAATGATGACTCCAGAAGCAATGAAGACTCCAGTTCACCAAGAACACAATGTCCTTCGCCTTTTTCTAAGGATTCAAGTCAAAACAGAAGGCTGAAAAAATATGAAAACGATGACATTCCTCAAGAAAAGGTGGTCCGCATCTACCAAGAAGAGCTGGCTAAAATTATGACCAGGAGAGTCGACGATATGCGTCACAACCGCGAAGGATTTCCTGGTGTGTTTCCTCCTTTTTTTAGTGGCGGAATGCCTCCACACATGGAGAGGCCACCAGAGGACATCCGCATGGCCCTTGAAGCATATCACCGAGAACTTGCCAAAATTCAACCGGGTGGTAACATTCCAAACCTCCACAATATGCCAGGAATGCCACCTTTTCCTAACCTAATCGCTTTGCAGCAGCAAGCGATGCAAGCCCAGAACCAACACATGAACGGGTCCGGAGCGGTCCAAGACCTCTCCTTACCCAAAGATAAAAATACCAAAATAAATGGAATGACTGATAGTGATAAGGATAGATCTATGGACGCAGAGGAGGCTATAAGGCACGCAGGGAGTGCCTTCTCATTAGTTAGACCAAAATTAGAACCTGGACAACAGTCGACCGGATCATCGGCATCTAGCCCGCTCGGCAACGCGATACTCCCTCCAGCGATAACTCCAAATGATGACTTCAGCAATTCCGCTGCTGCTAGTCCACTACAACGAATGGCCTCAATAACAAATAGTCTTATATCACAGCCTCCAAATCCACCTCATCACGCGCCGCCACAACGATCTATGAAGGCAGTCCTTCCTCCAATAACTCAGCAACAGTTTGATCTCTTTAATAACTTAAATACTGAGGACATCGTCAAGAGAGTTAAGGAGGCTCTGAGCCAGTACTCAATTAGCCAAAGACTATTCGGTGAATCTGTACTCGGATTATCACAGGGTTCTGTCAGTGACCTATTAGCGAGGCCTAAACCCTGGCATATGCTAACCCAAAAAGGGAGAGAACCTTTCATCAGAATGAAAATGTTCTTGGAAGATGAAAACGCTGTACATAAACTAGTCGCATCTCAATACAAAATCGCCCCCGAGAAGCTGATGAGAACTGGAAATTATAGCGGAGCTCCTCCTTGTCCGCCAAACATGAACAAGCCGATGCCACCGACGCAGAAAATGATCTCAGATGCGACTTCCCTGCTTAGCAAGATGCAGCAGGAACAGCTTCTCAGTTCAGGTCATTTGGGTCATCTTGGACAACCCACACCACTCCTCCTGACGCCACCCGGGTTTCCTCCACACCATGCGGTTACATTACCGCCTCAACATCACGATAATAACAATAAGGAAAGGAAACCACCACCTCCACCACAACCCCATCATCAACCGCCCATAATGCGCGGTCTCCACCAGCACATGTCTCCCAGTGTATACGAGATGGCTGCATTGACGCAGGACCTCGATACACAAACCATCACGACGAAGATCAAAGAAGCTTTATTGGCGAACAACATCGGCCAAAAGATATTTGGCGAGGCAGTGCTAGGTCTGTCGCAAGGATCAGTCAGTGAACTTTTGTCGAAACCGAAACCTTGGCACATGCTCAGTATCAAAGGCCGAGAGCCGTTCATCAGAATGCAATTGTGGCTTAGCGACGCTCACAATATCGACCGCCTGCAGGCCTTAAAGAATGAGAGACGCGAGGCGAACAAACGGCGAAGATCGAGCGGTCCCGGTCAAGATAACTCCTCAGACACGTCATCAAATGACACGTCAGAATTTTACCACTCGAGCTCACCGGGCCCCACTTCCGGCGCGCCTTCAGCAAAAAAGCAACGGGTATTATTCTCTGAGGAACAAAAAGAGGCCCTGAGACTAGCGTTCGCGCTCGATCCTTACCCGAACACGCCAACCATCGAGTTTCTAGCGGCAGAATTAGGACTCTCGACCAGAACGATAACGAATTGGTTCCACAACCATCGCATGCGACTAAAACAGCACGCGCCGCACGGCTTGCCCGCCGAGCCGCCGGCGCGAGACCAGTCCGCGGCGCCCTTCGACCCCGTGCAGTTCCGCCTCCTCCTGAACCAGAGGCTACTCGAACTGCAGAAGGAGAGGATGGGCCTCGCCGGCGTCCCGCTGCCGTACCCGCCGTACTTCGCGGCCAACTCGAACTTCGCGGCTCTGATCGGGCGAGGCCTGCTGCCGCCCGACGAGCGCGCCAAGAACCCGTCCGGCGGCCTGGACCTCTCGATGCCGCTGAAGCGCGAGCCCGACGGCGACGACTTCGAGGACGACGACGTCGAGAGCAACCTCGGCTCCGACGACTCGCTCGACGAGGAGTCGAAGAACGAACCGAAAGCGGCGTCTACGCCCGCAGGCCGCTCGAGCCGACGGAAGCCGGCGGCGCCGCAGTGGGTGAACCCCGACTGGCAGGACGAGAAGCCGCGGAACCCCGACGAGGTGATCATCAACGGCGTGTGCGTGATGCGGAGCGACGACTTCCGGCGCGAGGCCGAGGAGACGGTGCGCGTGGAGCCGTCGCCCGCGCCGCGCGAGCCCTCGCCCGCCGCCTCGCCCGCCTCGCGCGCCTCCCGCGCCTCGCCCGCCTCGCTCGCCTCGCACGCGCGCAGCCTCGCGCGCTCGCCCGACGTGCTGCCCGAGGACAAGATCAAGACCGAGGCGGACGACGACCGGTGGGACTACTAG
Protein Sequence
MISYEFIAQLVEDVRRLQASLSALQEAHAQQLQRLEERLDEKKQHIARLEARLDTQRDYDDIKREISMLRFSELGPTERPHSHSHPKDIFGSQNHLLRSMDLGPSERVERKEALRSPAAPAHRDSSTERERSAERRDTGADEWPSTPPPLNNNTTHHNNNGPIPLPLPPPSPFRFEEHRPYRFAEDMGPLPPGALVGRLGDSLIPKGDPMEARLQEMLRYNMDKYANSNLDTLHISRRVRELLSVHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDEAAIMLLKSLIPKKVGTKDGSAGTGFGRPEGEGDERLAHMLNEASHMMKTPTGQPNNDDSRSNEDSSSPRTQCPSPFSKDSSQNRRLKKYENDDIPQEKVVRIYQEELAKIMTRRVDDMRHNREGFPGVFPPFFSGGMPPHMERPPEDIRMALEAYHRELAKIQPGGNIPNLHNMPGMPPFPNLIALQQQAMQAQNQHMNGSGAVQDLSLPKDKNTKINGMTDSDKDRSMDAEEAIRHAGSAFSLVRPKLEPGQQSTGSSASSPLGNAILPPAITPNDDFSNSAAASPLQRMASITNSLISQPPNPPHHAPPQRSMKAVLPPITQQQFDLFNNLNTEDIVKRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGNYSGAPPCPPNMNKPMPPTQKMISDATSLLSKMQQEQLLSSGHLGHLGQPTPLLLTPPGFPPHHAVTLPPQHHDNNNKERKPPPPPQPHHQPPIMRGLHQHMSPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNIDRLQALKNERREANKRRRSSGPGQDNSSDTSSNDTSEFYHSSSPGPTSGAPSAKKQRVLFSEEQKEALRLAFALDPYPNTPTIEFLAAELGLSTRTITNWFHNHRMRLKQHAPHGLPAEPPARDQSAAPFDPVQFRLLLNQRLLELQKERMGLAGVPLPYPPYFAANSNFAALIGRGLLPPDERAKNPSGGLDLSMPLKREPDGDDFEDDDVESNLGSDDSLDEESKNEPKAASTPAGRSSRRKPAAPQWVNPDWQDEKPRNPDEVIINGVCVMRSDDFRREAEETVRVEPSPAPREPSPAASPASRASRASPASLASHARSLARSPDVLPEDKIKTEADDDRWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01338275;
90% Identity
iTF_01034322;
80% Identity
iTF_00843389;