Basic Information

Transcription Factor Domain

TF Family: zf-GATA
Domain: zf-GATA domain
PFAM: PF00320
TF Group: Zinc-Coordinating Group
Description: This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 1.4e-17 5e-14 52.3 3.9 1 35 23 56 23 57 0.97

2 2 2.2e-18 8.1e-15 54.8 6.0 1 34 77 109 77 111 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	1.4e-17	5e-14	52.3	3.9	1	35	23	56	23	57	0.97
2	2	2.2e-18	8.1e-15	54.8	6.0	1	34	77	109	77	111	0.98

Coding Sequence: ATGACGCGTGGTGACGTGTGGCTGGCCACAGATGGAGTGCTGCAGGCTCAAGAGGAGGGACGCGAGTGCGTAAACTGCGGCGCTAACAACACACCGCTGTGGAGAAAAGACTCCACCGGCCACTACCTGTGCAACGCCTGCGGTCTCTACCACAAGATCAACGGCGTCAACCGCCCGCTCGTGAAGCCGAGCAAGCGGCTGTCGGCTGCGCGGAGACACGGTCAGAGCTGCACCAACTGCGGTTCCAGAAACACCACGCTGTGGAGACGCAACAACGATGGTGAACCAGTCTGCAACGCCTGCGGCCTTTACTACAAGCTGCACGGCATTAACAGACCACTTGCAATGAGGAAAGACGGCATACAAACCAGAAAACGTAAACCGAAAAAATCTGCCAACGGTGTGAAGCCCTCTCCAGAAACACCCAAGAAGGACGGACAGACCTCACCCGGGATTGATGaGAGTAAGCCAAGTATATCGGAAGTCCCTTTGCCGCTGCCGGCTTCGATGTCGGGCCACGCGCCGGGGAAGGCTACTCGGCTACCCTCCGCGCCGGCCTTTCTCTCGAACCCCTCACTCTTCAACATTAAGAGCGAACCCAATGCGGCGACCGGATACGAGGGATACGGCTCACACGCGAGCTCCAATGGACCGTATCATTCTCAGCAACATTACTTACACGCCTTGCAGTACGGCCTGGGCGGAGGTGAGGAGGAGGAAGTCAGCGGGTTCCTGCACCAGAGGAACGTGACTGCGCACGCCAAACTCATGGCCTCCACGTAG
Protein Sequence: MTRGDVWLATDGVLQAQEEGRECVNCGANNTPLWRKDSTGHYLCNACGLYHKINGVNRPLVKPSKRLSAARRHGQSCTNCGSRNTTLWRRNNDGEPVCNACGLYYKLHGINRPLAMRKDGIQTRKRKPKKSANGVKPSPETPKKDGQTSPGIDESKPSISEVPLPLPASMSGHAPGKATRLPSAPAFLSNPSLFNIKSEPNAATGYEGYGSHASSNGPYHSQQHYLHALQYGLGGGEEEEVSGFLHQRNVTAHAKLMAST

Sequence clustering based on sequence similarity using MMseqs2