Basic Information

Insect: Ithomia salapia
Gene Symbol: -
Assembly: GCA_028829205.1
Location: JAPOND010000019.1:2836596-2840013[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.045 3.8 8.8 3.9 1 23 436 458 436 458 0.97

2 9 0.0011 0.09 14.0 2.0 2 23 499 521 498 521 0.96

3 9 0.033 2.8 9.3 0.1 2 23 527 548 527 548 0.97

4 9 0.00025 0.022 15.9 2.1 1 23 555 577 555 577 0.98

5 9 2e-05 0.0017 19.4 0.3 2 23 583 604 582 604 0.97

6 9 8.2e-05 0.007 17.4 1.3 1 23 613 635 613 635 0.99

7 9 7e-07 6e-05 24.0 0.6 1 23 641 664 641 664 0.97

8 9 0.13 11 7.4 0.9 1 14 670 683 670 693 0.82

9 9 0.035 3 9.2 1.9 1 23 701 724 701 724 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.045	3.8	8.8	3.9	1	23	436	458	436	458	0.97
2	9	0.0011	0.09	14.0	2.0	2	23	499	521	498	521	0.96
3	9	0.033	2.8	9.3	0.1	2	23	527	548	527	548	0.97
4	9	0.00025	0.022	15.9	2.1	1	23	555	577	555	577	0.98
5	9	2e-05	0.0017	19.4	0.3	2	23	583	604	582	604	0.97
6	9	8.2e-05	0.007	17.4	1.3	1	23	613	635	613	635	0.99
7	9	7e-07	6e-05	24.0	0.6	1	23	641	664	641	664	0.97
8	9	0.13	11	7.4	0.9	1	14	670	683	670	693	0.82
9	9	0.035	3	9.2	1.9	1	23	701	724	701	724	0.96

Sequence Information

Coding Sequence: atgttacataacaCTGGAACCTTCGGTCAAAATGAAGTGCCGATAATTCCTAACAATGAAATGAATTTATCTCCTCAAAGTGATAATACTTTgggcaataataatatatctggAACTGCACATCAACCGCAACAGACGACGCATATTAACGTCCCCGAATATAATACATATGGAATCAACATGAATGAAGGTTTGAGCCAATTTCATAACACTAGTCTTCAAACAAGTACACATACACACGAAAATTGGTCAAATAATATGTTACCAATGAGCTTGAATGTACCAAACGAACAGTCACTGCTAACTTTCCACGGTCTCGAAAAACCTGAAACGAACCCTGATTACAAAGGGCATTGCTTTAAAAACACATTGAATGTGCCCCTGGTTTACACAAAAGcatttcataaacaaataaacatggattacaattattttagccCAACTAATTACGATATAAATGATGGTAACAATCTGTCAAGTACTAAAGAACAGTCTCTTGAAGAAAATCTTGACTTAACAGCCCAGAGCTCACCTTCCACAAAAGGACCAAGCTTAACTAAATCAAATGAAGATAATAGAATAAGTACTAATTTACTAATTAACTATACTAAGACAGAAGCTGATAATCATGGTGATAGTTCTAACAATCCTAGTGAAGATTCATTCTGCTACGAGTTAGATTTATCCAATAAACCTGTACATAACAtcaaaacagaaaatatttcaaatataaataaactgctTAAAGATGATTCAAGGAAACAATTAGAGAAGAAGGTTAAaatgattgaaaatataatttcccATCCTTCAAATtcacgaaaaataaaaattgagcaAGAAAAGATGAAATTAGAAGATACTGAGGACGCTGACTTTGATTTATCAGACACATcagatcatgattttttttcagattccTACAAGACTAGCAAAaccaataataatgttaaattaaagaaaacaaaaacaaaagtacAAAGCTCTAATGTTTCCACTAAAAGTGGTGTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCATGGTGATGACGTTAACATGATCAATAAGAATACCATAAAAGTAGAAGaaggtttaataataaaaactgaagTCGTACcagctatatttaatatagaacaGTTCAACCCATTCCTTCGTGATACTTACGGTATACAAGCGGAGGAAACAAAGGACTATGATATCATTGGCTCTGACAGCAGTATAAATGTGgcaaaagaaattattaaaaatggtgCATCTCTCAAAACTGCATTTTTTGAATGCCCCCACTGCAAATTATTCTTTAACAATACAAAACGTTTTCTTATACACACTAAATGGCATACATTTGGATACATAACAGAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGGACATCCCATGTGCGGATTGTAAAAGAACATTCCACAGTAATATGAGCTTGATGGAACATAGACGGAAGTACCATCCCACTCGTACTCGGGAATGCAAAATCTGTGCTAAGACGGTTGTGGGCATGACAGCTTTACGGACACACATAGCAACTCATACCACAACCGAATCAAAATTTCAATGTACAGATTGTCCAAAGTGGTTTAAGTATGCTCATTCGCTTGCAAAGCACAGGGACACCCATCTGGAAAAAACGCAAGAATGCTCTCAATGCCCCAAGAAATTTGGTTCCCTGGCACTACTGAATGTACATATGAAGACCCATGAGCGAGTGCTCCGTGGAGCTACATTTAGATGTACTTACTGTGCGAAAGGCTTCTTTGAAAGTTACAGCTTGCAGGCACACGAACGCACACACAGAAATGAAAGACCATTTGTTTGTGAGATTTGTAACACAAGTTTTGGTACCAACTCTAGTTTGAAACGTCATTTGAAAGTTTCTCACAGCACTTCAAAGCCCTTTGAATGCAGTACCTGTCACAGGTCCTTCGTATCCGAGTCCATCCGAGACAGACATGCCATCAGATACCACGGAGATCCTAACGAGTTCAAGTTTGTTTGCAAGTTGTGTCCATGCAAATATTTGAATGCCAGAGAGTTGAGAAGGCATATCTACAAGGTACATCCCAAACCCAAGATGAAGATTGAAGTAGAAAGTGATTAG
Protein Sequence: MLHNTGTFGQNEVPIIPNNEMNLSPQSDNTLGNNNISGTAHQPQQTTHINVPEYNTYGINMNEGLSQFHNTSLQTSTHTHENWSNNMLPMSLNVPNEQSLLTFHGLEKPETNPDYKGHCFKNTLNVPLVYTKAFHKQINMDYNYFSPTNYDINDGNNLSSTKEQSLEENLDLTAQSSPSTKGPSLTKSNEDNRISTNLLINYTKTEADNHGDSSNNPSEDSFCYELDLSNKPVHNIKTENISNINKLLKDDSRKQLEKKVKMIENIISHPSNSRKIKIEQEKMKLEDTEDADFDLSDTSDHDFFSDSYKTSKTNNNVKLKKTKTKVQSSNVSTKSGVXXXXXXXXXXXXXXXXXXXHGDDVNMINKNTIKVEEGLIIKTEVVPAIFNIEQFNPFLRDTYGIQAEETKDYDIIGSDSSINVAKEIIKNGASLKTAFFECPHCKLFFNNTKRFLIHTKWHTFGYITEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDIPCADCKRTFHSNMSLMEHRRKYHPTRTRECKICAKTVVGMTALRTHIATHTTTESKFQCTDCPKWFKYAHSLAKHRDTHLEKTQECSQCPKKFGSLALLNVHMKTHERVLRGATFRCTYCAKGFFESYSLQAHERTHRNERPFVCEICNTSFGTNSSLKRHLKVSHSTSKPFECSTCHRSFVSESIRDRHAIRYHGDPNEFKFVCKLCPCKYLNARELRRHIYKVHPKPKMKIEVESD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01034016;
90% Identity: -
80% Identity: -