Basic Information

Insect: Ithomia salapia
Gene Symbol: -
Assembly: GCA_028829205.1
Location: JAPOND010000136.1:1135423-1137297[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.1 8.7 7.7 1.1 1 23 48 70 48 70 0.95

2 16 0.26 22 6.4 0.1 3 23 100 121 100 121 0.95

3 16 0.036 3.1 9.1 0.7 2 23 142 163 141 164 0.93

4 16 0.00024 0.021 16.0 2.6 2 23 170 192 169 192 0.95

5 16 0.00059 0.05 14.8 0.9 1 23 197 220 197 220 0.96

6 16 0.15 13 7.2 0.7 2 23 223 245 222 245 0.94

7 16 0.013 1.1 10.6 1.4 2 21 252 271 251 272 0.93

8 16 0.0043 0.37 12.0 0.4 1 23 331 354 331 354 0.92

9 16 1.6 1.4e+02 3.9 0.0 3 23 383 404 381 404 0.93

10 16 0.19 16 6.8 0.2 3 23 428 450 427 450 0.90

11 16 0.00093 0.08 14.1 0.5 3 20 457 474 455 478 0.90

12 16 0.01 0.88 10.8 0.4 1 23 483 506 483 506 0.97

13 16 0.0006 0.052 14.7 0.4 2 23 512 534 512 534 0.94

14 16 2.9e-05 0.0025 18.8 4.7 1 23 538 561 538 561 0.97

15 16 0.00013 0.011 16.9 0.6 2 23 568 589 567 589 0.96

16 16 0.0022 0.19 12.9 2.6 1 23 595 617 595 617 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.1	8.7	7.7	1.1	1	23	48	70	48	70	0.95
2	16	0.26	22	6.4	0.1	3	23	100	121	100	121	0.95
3	16	0.036	3.1	9.1	0.7	2	23	142	163	141	164	0.93
4	16	0.00024	0.021	16.0	2.6	2	23	170	192	169	192	0.95
5	16	0.00059	0.05	14.8	0.9	1	23	197	220	197	220	0.96
6	16	0.15	13	7.2	0.7	2	23	223	245	222	245	0.94
7	16	0.013	1.1	10.6	1.4	2	21	252	271	251	272	0.93
8	16	0.0043	0.37	12.0	0.4	1	23	331	354	331	354	0.92
9	16	1.6	1.4e+02	3.9	0.0	3	23	383	404	381	404	0.93
10	16	0.19	16	6.8	0.2	3	23	428	450	427	450	0.90
11	16	0.00093	0.08	14.1	0.5	3	20	457	474	455	478	0.90
12	16	0.01	0.88	10.8	0.4	1	23	483	506	483	506	0.97
13	16	0.0006	0.052	14.7	0.4	2	23	512	534	512	534	0.94
14	16	2.9e-05	0.0025	18.8	4.7	1	23	538	561	538	561	0.97
15	16	0.00013	0.011	16.9	0.6	2	23	568	589	567	589	0.96
16	16	0.0022	0.19	12.9	2.6	1	23	595	617	595	617	0.97

Sequence Information

Coding Sequence: ATGAAGGGTACATTTATAGTTGAAAACTTGTTTTCAGGTGAAAATCGAAAGAGCTGTCAATCATCATCTATGCGTAGGAGAAAAAATCTTCAGttgatatttaataacacaAGTGTTATACCGTTCAAATGGAGAGGGAGATATCTCTGCTTCTTTTGCAGTAAAGATATTCCGGAATATTCGGAACTCCGGAAGCATACAAAATCTCACGGCCCCTGTACCACAAACGATCATTCTCTCAAAGTCCTAAAGGGAGGAAAGAAcatggaaataaaaatagacaTATCTGATATGGGTTGTGAGATTTGCAGTGAAGAGTTTTCTGTTTTTGATGATGTTTTGAATCATTTATACGTGAAACATAAATTAGAATATGACAAGGATGTAGAGATGGCTATAGAGGAGTACAGGCTGGTAGATTTGAGCTGTCTGGTTTGTCAGGAAAAGTTTGCGTATTTTGGTTATTTAGTGTCTCATGTTAATAATCATCATCCCAAGAATTGTCTTATTTGTGACAAATGTAACCagaagtttaataaaaagagGGATTTGTTCTCCCATATGAAAAATTACCACAGAGAGGGGGGTTATCAATGTGATGTTTGCCCACAAAGCTTTAGTTCgttaaatattttgagaaaacATAGAAACAATCGTCACTTGACCAGATGTAACATATGTCATTTGAGACTTCCTTCAGCAGTTCTGAAGCAAAAGCACATGGAGTTAGAACATCCTGATGATGATTCTCTACAATGTGAAATTTGCTATAAAGATTTTCACACGAAACAAGGACTTAAAATGCATTCGCGGAAATGCAGAGGTGACGTATTTGATGATATACCAATTAAAAAGGAAGAATACGATTTAATGGATGTCGATAATGAAGACGATATTATAAAACGACCAAGCGTCAAGCAAATAAGAGAAAATATCGTGATTGTCATAAACATGTCCACAGCTATAccgtttaatttttataaaaataaattcaactgCTTCTATTGTTCCAAAGATTTTCCTGATTCTGATTTAATGCGAGAGCATACGGTCATAGAGCATCCCATCTGCAATGTCAAAGAAAAATGTATTAGAAAATGCAGAGAGTCTGTAGCTTGTGTGAAGATAGATATATCGAGCTTGGCTTGCAAAATATGTTTCGAATCTATGGGAGATCTGGATACATTATTGGACCATCTCATAGTAAAACACGAAGCCAACTATGATAAGTCTATCACAACTTGTTTACAACCTTACAAACTAATCAAGGACCACATGGCGTGTCCTAGTTGTCCGGGCGAGGTGTTCAGATTTTTCGGCACTTTGCTCAAACATATGaacaataaacatacaaataataatattatttgcgtGTACTGTGGTCAGACTTTTAGGCGGGATCAAAATTTACGTGTACATGTTTGGAGACATCACAGAGATGGTAGATTCAAATGTAACATTTGCGGCGCTGATTGTAACATACCTTCAAGACTGTACATGCACATGGCGAAAGCTCATGGAGTTAAAGCAGCAAAATGTCCAAAATGTTCAGAATCGTTTGCGACCCAGTATTTAAGACAGAAACATTTGATAGAAGCCCACGATTCGGGCCACAAATGTTCGTATTGTGGAAAACTCTTCACTAGGAACTCATTCATGAGAGACCACATACGAAGAACACATTTGAAGGAAAAGAATGTTGAGTGTTCTATTTGCAATATGAAGTTCTTTAATAACATTCTTCTTCGTCGACATATGGTCAAACATAGCGGAGAAAAGAACTTTCATTGCGATATGTGTGGCGAGCGGTTTTATTGGAGGAAGAGTCTGAGAACTCACATGGCTAGGCATAACAAGCATATCAGTCCTCTATAA
Protein Sequence: MKGTFIVENLFSGENRKSCQSSSMRRRKNLQLIFNNTSVIPFKWRGRYLCFFCSKDIPEYSELRKHTKSHGPCTTNDHSLKVLKGGKNMEIKIDISDMGCEICSEEFSVFDDVLNHLYVKHKLEYDKDVEMAIEEYRLVDLSCLVCQEKFAYFGYLVSHVNNHHPKNCLICDKCNQKFNKKRDLFSHMKNYHREGGYQCDVCPQSFSSLNILRKHRNNRHLTRCNICHLRLPSAVLKQKHMELEHPDDDSLQCEICYKDFHTKQGLKMHSRKCRGDVFDDIPIKKEEYDLMDVDNEDDIIKRPSVKQIRENIVIVINMSTAIPFNFYKNKFNCFYCSKDFPDSDLMREHTVIEHPICNVKEKCIRKCRESVACVKIDISSLACKICFESMGDLDTLLDHLIVKHEANYDKSITTCLQPYKLIKDHMACPSCPGEVFRFFGTLLKHMNNKHTNNNIICVYCGQTFRRDQNLRVHVWRHHRDGRFKCNICGADCNIPSRLYMHMAKAHGVKAAKCPKCSESFATQYLRQKHLIEAHDSGHKCSYCGKLFTRNSFMRDHIRRTHLKEKNVECSICNMKFFNNILLRRHMVKHSGEKNFHCDMCGERFYWRKSLRTHMARHNKHISPL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01198043;
90% Identity: iTF_00897141;
80% Identity: -