Isal002321.1
Basic Information
- Insect
- Ithomia salapia
- Gene Symbol
- -
- Assembly
- GCA_028829205.1
- Location
- JAPOND010000015.1:339764-345985[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 30 0.0036 0.31 12.3 4.7 1 20 195 214 195 217 0.94 2 30 0.0013 0.12 13.6 0.3 2 19 258 275 257 278 0.95 3 30 0.00013 0.011 16.8 0.4 3 23 305 326 303 326 0.96 4 30 4.6 4e+02 2.5 0.2 2 12 347 357 346 364 0.85 5 30 0.00054 0.046 14.9 1.4 1 23 377 398 377 398 0.96 6 30 0.00035 0.03 15.5 0.2 1 23 418 440 418 440 0.96 7 30 2.7e-05 0.0023 19.0 1.9 2 23 481 502 480 502 0.96 8 30 0.0011 0.097 13.9 4.1 2 23 545 567 545 568 0.96 9 30 0.012 1 10.6 1.2 1 23 617 640 617 640 0.95 10 30 0.00021 0.018 16.1 0.2 1 23 695 717 695 717 0.97 11 30 0.014 1.2 10.4 6.1 2 23 729 750 728 750 0.96 12 30 0.073 6.3 8.2 1.9 2 23 762 783 761 783 0.96 13 30 0.0039 0.34 12.2 1.7 1 23 793 815 793 815 0.98 14 30 0.017 1.5 10.1 5.8 1 23 844 866 844 866 0.96 15 30 0.00073 0.062 14.5 3.4 1 23 877 899 877 899 0.98 16 30 0.0087 0.75 11.1 1.6 1 23 907 929 907 929 0.97 17 30 0.0028 0.24 12.6 0.1 2 23 949 971 948 971 0.97 18 30 0.096 8.2 7.8 3.7 1 23 1018 1040 1018 1040 0.97 19 30 0.00015 0.013 16.6 0.4 2 23 1051 1073 1050 1073 0.95 20 30 0.0007 0.06 14.5 0.2 2 23 1096 1117 1095 1117 0.95 21 30 1.1 95 4.4 0.2 2 20 1121 1139 1120 1140 0.91 22 30 7.7 6.6e+02 1.8 5.9 2 23 1160 1182 1159 1182 0.94 23 30 0.0022 0.19 12.9 0.2 2 23 1198 1219 1197 1219 0.95 24 30 1.6 1.4e+02 3.9 4.2 5 23 1229 1247 1226 1247 0.94 25 30 0.0046 0.4 11.9 1.2 2 23 1258 1280 1257 1280 0.95 26 30 0.9 78 4.7 2.0 2 15 1297 1307 1297 1315 0.76 27 30 0.1 8.9 7.7 1.0 2 21 1319 1338 1319 1339 0.93 28 30 0.21 18 6.7 1.2 2 23 1360 1381 1360 1381 0.97 29 30 0.31 26 6.2 1.2 2 23 1388 1409 1387 1409 0.93 30 30 4.9 4.2e+02 2.4 0.2 2 13 1420 1431 1419 1436 0.83
Sequence Information
- Coding Sequence
- ATGGCACTCAAGCTCGGAAAATGCAGACTTTGCCTCAAGCTCGGCGACTTCTACTCAATCTTCACGATGGACAACAATTTACAACTTGCGGAGATGGTTATGGAATGCGCTCGAGTTAAAATATATGAAGGTGATGGACTGCCAGAAAAAATATGCAGTGAGTGTATACAAAAACTAAGTAGTGCTCACATTTTTAAACAGCAATGTGAGAGATCAGATCAAGAATTAAGACGTAACTATGTCCTACCTCCAGGTTCCACCCCCCCACCTCCAAACAGACAAAGTAGTGATTCAGCATTTTCAACTCATATGGAAGTTTCCAAGCCTATGTCTTCAAATGAAAGCAAGGCATCAATTGAAAGTAAGGTCACTCCCGTCAGCCGCGGCAGAAAGCGTAGCAAAGACAGCATTGATGACGCGTCAACTAGCAGTCGTTCTCACGAATATCGACCAGGCAGCTCAAAACGTGTTGATGAATTGAGAAGGTCCCAGAAAAAACCGAGAATATCAACTTATGATTCGGACTTGGATGACACTGGTTCTTTTTATTCACCAGAAACAGATTCAGATGATCCTTTACAATACAAATGCAATCAATGTTCCAAGGCCTTCAGATCAAAGAACAGTTTGTCTGCCCATTCTAAATGTCACAAAAGAAAATATGCTTTGAAGAATGAATTGCTGATGCAAAAAAATGAACCTGTGGCACCTATGGCGATAGTAGAAACGCCTAAAGTTTTAAGTGATGCTGTTGATGATGATGACAAACTAAAGTGTGAGAAATGTGGAAaagaattcaaattaaaaattatgctCAAAAGACACAATGATGTCTGTGGAAAATCGCCTAAGAAGGAACTTTTAGTATCGTTAGAGCCAATTGACGCAATTACTAAAACACCCAAACTAGATTGTGAGATGTgtacaacaaaatttaaaactatagaaACCTTGGAGAAGCATATGAGGATTGTGCATGCTGCTGTGCTTAAAAGAGATAAAGTGTGCATGAGAAATGATAATGGAAAAATATGTGTCCCTTGCTATTATTGTGGTCAGGCTTTTGATGACTTTTACATGCACTCTGCACATTTTAGTGAGTGTCCAAAGAGAGATAATACTGTTGACTTTGAATGCCCAATATGCAAAAAAGTGTTTAATAAGACAAGTTACTTTACGCATCTTAAAGCACATTTCTTTCAAACAACCCCAACTGAAACTCAAGTGGAATCCAGTTTCAAAAATGGAAACTTTCAGTGTCgcatttgcaataaaaaattgGTGAGTCAAGAGTCGCTTATCAAACATTTAGCAGCCCATATGTCCAATATAGATGATGCTGATGAAGGAGGTGATGAGGAATCCAGagcAAGCACAGTTGAAGACTGTGGTTCTATAAATTCTGAATTTAGTACAAATACTCCCAAAGGTAGTACTttacaatgtaaatattgtgataagtcatttaagtataaaaaagcaTTGATGTCTCATGAGGAAAAGCATAAAACAAGTATAGTAAAAATAGAAGCTCCGGACATAGATCAGTCCACAGATGGGCTTAACGACATGGATCAATCATTTACTCAGTACGATTCAGAATCTAGTCAAGATGACGGCGAGGACGATAACACTTGTGATATTTGCGAAAAACAATTTTCCTACAAGAGGCTTCTTTTGCAACATAAAAGAACAAAGCACCACATGACCTCCGGTACAAAAAGagccaaaattaatttaaaggatTGTTCGGTTCGCTGCTTGATTTGCGACATCGAAATGAAAGTTAGTGCTATCAATGAGCACAATCAGACACATATAACTGTCAATATAAAACCTAGGAATTTGTACACATGTATAGAATGCACCCAGCAGTTTAAGAGCTGCAGTGCTTTAGCAAATCATATCAAGCTTGTGCATAGATTGAAGCAGCAGCCAATGAATTCAAGTGCGCCCGCAGATTTAGCGGATTTTTGTGAAGTCGTTGTGACCAAGGCGGAACCCCTGGACGAGCTCCAGATTCACAACGGCTTCAGTGAGGTTTCCGTCAACGATGTTAAGCCATTAGTGAATATGAGCGGGTTCACTTGTCCTATTTGCAGCAAAACATTACCCACACTTATATCCCTCAAGAGGCATGTCAATTGGCACAACAATGTTGGAAAACATATGGAGAAGAAATTGGAATGCTTTGTTTGTAAAGAGACTTTCCGGTTTCAATGTCACTACAAGCTGCACATGCGTGAACATTACAACGACACTAATCTCGACCCAGCTCTACTTACCTGCACTATCTGCAACCGCAAAAGTAAGCACCTCCGCGCCGCGCAAGCTCATATGAACTTCCACAAACAGACACGTTTCAAGAGCAAGGACTATGAATGCTCGATTTGCAAAAGAGTGTTCCAGCATCGCAAAGTTTATCTCTCACACATGGCCATCCACTATAAACGCGGCGAAAGCGCCAGCAATACAGTAGTAGGTTCCGAGTTACCCAACACTGTTGATAAGAACGTGTTCGACGGCACCCACACTTGTCATCTATGTGGAAAAGTTTGCGGTTCCGAAAGATCCTTGAAGCATCACGTAATCTGGCACAATTCCAAAACATCGTTGTATGGAGCTAGACATCAGTGTGATATTTGCAATTTGCAGTTTACTAACAAAAAACGTCTTGAGCTCCACACTAGATCCCATTTCGAAGACGATAATGGTCCGTTTAAGTGTCACATTTGTGGAAAAGGATATCTAGTAGAAGATTACTTCAAGAGACACGTTAAAGGTCATAATTTCGATCACCAGTCACATAAAAAGAGAATTGAGAAACTTCGAAAAGATAAAGTGAAATGTCCGATTTGTGCTCGATACTACCCGGACCTTGTCAAACTTATTCGACACTTGCGACGAACGCACCCCGAAAGTAAGATGATCAAGGAGGATCCGGATGCACCAGCGCCTAACTATTATTCTTGTAAACTGTGTGCGAAGGTTTTTCTAGACGAGCGAAGATTGCAATTCCACGAAGAAGCACATTTACGTAAACCTGAGTTTTTCAAATGTAAGTTCTGTGGAAAGAAGACCATCTCTTTAAAGAATCACAGAGTTCATATAAAGGGTCATTTAACACAGAAATACATTGACAATCCTCTGAAATGTAGCAATTGTGATGAAACATTTACCCGCGGCTACGATTTGCAATACCACTTGCGAGACGCTCACAACATCAACGAGACCTGGATAGCAGAGCGAGGGGCGCAGACCCTGGACGGACCCCTCAAGGAACTGCAGTGCTCGATCTGCTACAAAGTGCTGGCCAGCAAAGGAAACTTCGAGCGACACATCGACTACCACAACTCGCTCAGATGCAATTATTGCTTCGAATATTTCACAGGTTCGAGATTTTTGGAGGGACATCTTGCGTTCAGTTGTGATACGAGGAAGTTACTTGGTGACACGGAAATTTACCCCAAGAAGGTTAAATGCCATATATGTTATAAAGCTTTTCATTTACAAGTGAAATTAGATTGTCACTTGCGTACGCAACACGATATTAGAACTTTCAAAGAAGCACGCGAAAGTAAAAAGGAAATCGTGTGCGATTATTGCTTCAAAGTCTTCGAAAACGAGTACGCTCTTAGCACTCACAAGATTTACCACCGGACCGTGGGCTACTACGGCTGCATATATTGCAATAGAAAGTTTAATACGATGACTCTGTACAGAAAACACAAAAACCACCACTTCTCTCAACTTAACGTAGATAATCCAACGAAATGCGAGCACTGTGATGAAACGTTTGTAGCATTTAGAAAATTGATCTACCACATGCGGGATGTACACGGCGACAACAAGGAGTGGATAGTGTTGCCAAAAGAGTCTATAGAGGAAAAATgcaatatttgtaacaaaacgTTCTTCAATATTCATAGACATCTGGATTATCATGAAGAAAATAGATGTCAAAAGTGTGGGGAATATTTCTATTCTCGGGCCGATTTTGACAATCATCTGTGTGCAATCGATAGCGACGAAGAAGTAACTGAAACTAACAGTAATGGCATCCGTGCCGTATACGAAGAGTGCAGCTTTTGCTTCAAGCCAGTGACTAGGAAGAACTCAAAGAGACTACACATCCAAATACATCGAGGATCCGGGTCTATATCGTGTCGCTTCTGCAAACTTAAGTTCAAAACAATGGATGCATTTAACATTCACGCGTTTTCCCACAGAAGtagaaagtacaaaaaaaaacctatcaAATGCCGGAAATGCGGAGAACAGTTTGTGAAATATGGAGAAATTGAAAAAAGGGAACCACCTGCTAATCTACCATCACAAGACGAAGACAGTCAGAATTCTATTGATATTGACGAAGGGAACTTACATTCATTAGTACATGCGCCAATTATATCAGATGTTTTATcgctatataacaaaaaatatgagagAAAGAGGAAGCCGCCTGCAACTGAGAAAAATGATAGTAGTAATGTTGTGGTTCTCACCGACGACGATTCCGTAGGCTTTGAATCCAATGAAGTTTCTGTTATAACTATTGATGACTAG
- Protein Sequence
- MALKLGKCRLCLKLGDFYSIFTMDNNLQLAEMVMECARVKIYEGDGLPEKICSECIQKLSSAHIFKQQCERSDQELRRNYVLPPGSTPPPPNRQSSDSAFSTHMEVSKPMSSNESKASIESKVTPVSRGRKRSKDSIDDASTSSRSHEYRPGSSKRVDELRRSQKKPRISTYDSDLDDTGSFYSPETDSDDPLQYKCNQCSKAFRSKNSLSAHSKCHKRKYALKNELLMQKNEPVAPMAIVETPKVLSDAVDDDDKLKCEKCGKEFKLKIMLKRHNDVCGKSPKKELLVSLEPIDAITKTPKLDCEMCTTKFKTIETLEKHMRIVHAAVLKRDKVCMRNDNGKICVPCYYCGQAFDDFYMHSAHFSECPKRDNTVDFECPICKKVFNKTSYFTHLKAHFFQTTPTETQVESSFKNGNFQCRICNKKLVSQESLIKHLAAHMSNIDDADEGGDEESRASTVEDCGSINSEFSTNTPKGSTLQCKYCDKSFKYKKALMSHEEKHKTSIVKIEAPDIDQSTDGLNDMDQSFTQYDSESSQDDGEDDNTCDICEKQFSYKRLLLQHKRTKHHMTSGTKRAKINLKDCSVRCLICDIEMKVSAINEHNQTHITVNIKPRNLYTCIECTQQFKSCSALANHIKLVHRLKQQPMNSSAPADLADFCEVVVTKAEPLDELQIHNGFSEVSVNDVKPLVNMSGFTCPICSKTLPTLISLKRHVNWHNNVGKHMEKKLECFVCKETFRFQCHYKLHMREHYNDTNLDPALLTCTICNRKSKHLRAAQAHMNFHKQTRFKSKDYECSICKRVFQHRKVYLSHMAIHYKRGESASNTVVGSELPNTVDKNVFDGTHTCHLCGKVCGSERSLKHHVIWHNSKTSLYGARHQCDICNLQFTNKKRLELHTRSHFEDDNGPFKCHICGKGYLVEDYFKRHVKGHNFDHQSHKKRIEKLRKDKVKCPICARYYPDLVKLIRHLRRTHPESKMIKEDPDAPAPNYYSCKLCAKVFLDERRLQFHEEAHLRKPEFFKCKFCGKKTISLKNHRVHIKGHLTQKYIDNPLKCSNCDETFTRGYDLQYHLRDAHNINETWIAERGAQTLDGPLKELQCSICYKVLASKGNFERHIDYHNSLRCNYCFEYFTGSRFLEGHLAFSCDTRKLLGDTEIYPKKVKCHICYKAFHLQVKLDCHLRTQHDIRTFKEARESKKEIVCDYCFKVFENEYALSTHKIYHRTVGYYGCIYCNRKFNTMTLYRKHKNHHFSQLNVDNPTKCEHCDETFVAFRKLIYHMRDVHGDNKEWIVLPKESIEEKCNICNKTFFNIHRHLDYHEENRCQKCGEYFYSRADFDNHLCAIDSDEEVTETNSNGIRAVYEECSFCFKPVTRKNSKRLHIQIHRGSGSISCRFCKLKFKTMDAFNIHAFSHRSRKYKKKPIKCRKCGEQFVKYGEIEKREPPANLPSQDEDSQNSIDIDEGNLHSLVHAPIISDVLSLYNKKYERKRKPPATEKNDSSNVVVLTDDDSVGFESNEVSVITIDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00461759;
- 90% Identity
- iTF_01033931; iTF_01034835;
- 80% Identity
- -