Basic Information

Gene Symbol
-
Assembly
GCA_028829205.1
Location
JAPOND010000153.1:3239514-3243697[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 0.12 1.4e+02 3.4 0.1 21 46 343 369 314 369 0.69
2 6 0.00099 1.2 10.0 0.3 22 42 446 465 418 466 0.83
3 6 0.022 26 5.7 0.1 23 45 593 614 570 615 0.86
4 6 5.1e-07 0.0006 20.6 0.2 3 45 666 717 664 718 0.86
5 6 0.0012 1.4 9.8 0.1 14 40 838 871 830 877 0.85
6 6 5.1 6e+03 -1.8 0.3 2 14 1021 1033 1020 1038 0.85

Sequence Information

Coding Sequence
ATGGAGCAAATTGTAGTGAAAACTGAGGTTCAACCAAATGGGGACATACTACTTTTTTATGTTGATGaacATGAGGAGTCAGATATAGGAGTTTTAGAAAATGAACAGGAAGATGTCATGCAAATGTTGCCGGAAACCAAGTATGTGATAGAAGATAATGGGGAAGGGGAATCAGCAGATGAACTGGACATTGCCCAAGCTGCAGAAGAAGTAGCAAAAGAAATATGGCTGGATGAGGAAATAAAACGTCTTATTGTGTTTTACATTGACAATAAAGAAACATTCCTCAGCGGAACAACCAAGAAAAAACACTTATGGGCCGTAGCCTGTAGAACAATGCTTACTGGTAAAAATCCTGTATCATGTGAAGTCAAATTACGAATGCTTAAGCAACAGTTTATCCAAGTTTGTCTTGAAAAGCAAAAGGGCAACATAGTGACATGGCCATACTTTGACTTGTGTCATCAGGCTTTTTACGAAGACAGTGTTGTGAATGTATCCGTAAGTGAACCTGAACCAACCAAGGTTGTTATAAACATGCCGGTTCAAAATGTTGTAAACCAGGATGGTGTTTTAGTTGTTAAGAAAGTAAACACCACTCAAGGTAAAGACGTAGATGAAAAGGTAGAAACAATGCTTAAACAATATATCAAGCATAAACAGGTATTTAAAAGAAGTCATCATATGCCAAGAGGTCTTTGGGAAACCATTGCATTGGAAATGGGAGAAGAAGACGTTGAATACTGGCATAAAAGATTCTTGAATTTTAAACAGCATTATGTaagaatgttatataaaagGAAGGAAAGCGGCTCCGATGGTATTAATTGGccctatatgaaatattttgacCATATATTTGGTGATGATGAGGAATTCCAGAAGAAATTTGTTCTGAATTATAATGATGATGACCCAGATAATCCAGATGTTGAAATAGACAATTCCTGGAGTGATACTGAAAAAACTTTCTTGGTGAAATACTATTTTGATTGCTTTCATGAATTTCAAGACCCTACAATACCTAATAAGTTCTTATGGCAAGAAGTTGGACGATTACTTGATGCCAAACCtgatgaatgtaaaaataaatataatgaattactAAATGAACATTTCAGTGATCTTACTGAAGGGGCATATGATATATCCAACAGAACACCGATAGCAATTATCTTTGACAATATCATAGCAAAAGAAACGGTGACAGAATTGGAACACCCCATAAATAGATCAGATTCCACGGATGTTTGGAAAACAGAGCAAATAGATGAGTTAGtgcaatatttatatgataatataaatatgttaaaagattCCATTTGTTATTATGTTTGTTGGGCGACTATTGCTAAGAAAATTGAGAGAAGTGTGAAATCATGTATTAAACAGTgggatattttaaaaacattgtataaaagtattttagagGACAAAAAAGAGAATTCTGATATGCAAATAGATTGGAGATATATTGATTTGTTTGATAGAATATTTGATTATGGCATGGATGTTAATTTGCTTGATGGTTATGAAAAGTCACAGGAACTTAGCAAAGGTAACAATACTGGCAAAGTTGGAGttaaaaaaatcaccattaaaaataatgataaaattacaattgaGGGTACTGATGATGAAGAATCTTATGATGAAAGAGGGTTCACAAAGCGTTCTAAGAAACGGAGTGGTGACGCTAAAGCATTTAAGATATTAGAGTActacttgaaaaataaagacaaatttTCCTCGTCTCAGCAAAAAAAACTTGCATTGTGGGAAATATTGGCAAAACAAATAGGCATAACAGCTACCGAATGTGCGCACAGATTTCGTAACTTCAAACAAGTTTACACTGGATATGTTCAACGAGAAATTAATAAACCAGAAATGCCAATTCTATGGCCATACTACACTCTGTGCAAGAAGGTGTTTGGCTACAGAGCAATAAAGTCCAAATTAAAAAACGGTAAGATGGAATCAGAAGACGGAGAAGATTGGTCTGCGAAAGAAATCAAGCAATTGATTAATTTCTTTTCTAGAAATTATCATACCATGGCGgaaaatattgaagaaaaaacTAGATGGACGCTGATCGCCCAAGAAATAGGTAGAAGTGACAGCAGCTGCCGTGATAAGTTTTTAGAATTAAGGAAATCATATAGGAAATTGAAAACAATGAAATCGAGGAATCCAGATTTGAAAGTATCGTGgaagtattttaatatgatcgatgagatttatcaaaatggCGCCGAGAATGTTGAAGTTTTAGAAGAGATGGAGGTGGATGATGCGAGTGTCTTTGAAGTGAAGACTGAGATGCACGAAGATGACGACTTTCAATGCATCATCGTTATACCAGAAGGCGAAGATATTAACAATGcacaaataattatacaagATCAGGAGAAACAAATAGATAATGCACAAGATTTTTTTGTGGAAACGAAAAGGAATGTCACGGTATGGAATAGAAGAAGCAAGAAACGACTGCTCTCGTTACATCTTAAATATTTGAGAACTCATAAGGGAAGGGAGATTAATTCCAGAGAGATGTGGACGGAGATTGCGTCCCAGTTGGAAGAAAAGACACCTGCGTCCTGTAGGAAAATGTTAATCAAACtaaaaaatcaatacaaacTAGATAAAGACAGCATATTATCCGCATATCAGCCGCTTTTGGACAAAATATTGGCTTTCAAACCAAAATATGCAAAATGTAATAAAGCGAAAGTGTTAGAAGACATCACAGACTATAATGACGTGCCTATATCTgatgataaagtttttaatgccCTAAATTACTATTTGCAAAATCTTGAAGATTTCGTCAGCCCAAAATTTGAAAAGAATTATCTTTGGACGGAGCTTGCCAAATTCATATCTGAGCCTGTCACTAATATTTACAGcaaaataaactatttgaaGCAGAATTTCGACAATGAAATCGAAACACCATTCCGTGAGATTTTACAAATAATCGTGGCAAAGGAAAATGCTCTTAAagatgatattaataaagatttaaatccCGCCAGAGAAGAGGAGGTTGAAGAACAAAACTGGTCTGATTTGGAAATTGAACGTCTTTTGACCTGGTATCTGGCGCACTTGGACAAGTTCAAGAATCCCAAATTTGTTCGGAGTTACTTGTGGATGGAAGCTTCAGATATATTGAAGAAGAGTCCGTTAGTCTGTTCAAAGAAAATGTTAGAAATAAGATCACAATATCGAAGTATGGTGAAGGAAAATCCAGAAGAATTGAACAATTggaaattttacaatttatgtcAAAGAATTTACGGCACTGGGAAGAAAAGCaactaa
Protein Sequence
MEQIVVKTEVQPNGDILLFYVDEHEESDIGVLENEQEDVMQMLPETKYVIEDNGEGESADELDIAQAAEEVAKEIWLDEEIKRLIVFYIDNKETFLSGTTKKKHLWAVACRTMLTGKNPVSCEVKLRMLKQQFIQVCLEKQKGNIVTWPYFDLCHQAFYEDSVVNVSVSEPEPTKVVINMPVQNVVNQDGVLVVKKVNTTQGKDVDEKVETMLKQYIKHKQVFKRSHHMPRGLWETIALEMGEEDVEYWHKRFLNFKQHYVRMLYKRKESGSDGINWPYMKYFDHIFGDDEEFQKKFVLNYNDDDPDNPDVEIDNSWSDTEKTFLVKYYFDCFHEFQDPTIPNKFLWQEVGRLLDAKPDECKNKYNELLNEHFSDLTEGAYDISNRTPIAIIFDNIIAKETVTELEHPINRSDSTDVWKTEQIDELVQYLYDNINMLKDSICYYVCWATIAKKIERSVKSCIKQWDILKTLYKSILEDKKENSDMQIDWRYIDLFDRIFDYGMDVNLLDGYEKSQELSKGNNTGKVGVKKITIKNNDKITIEGTDDEESYDERGFTKRSKKRSGDAKAFKILEYYLKNKDKFSSSQQKKLALWEILAKQIGITATECAHRFRNFKQVYTGYVQREINKPEMPILWPYYTLCKKVFGYRAIKSKLKNGKMESEDGEDWSAKEIKQLINFFSRNYHTMAENIEEKTRWTLIAQEIGRSDSSCRDKFLELRKSYRKLKTMKSRNPDLKVSWKYFNMIDEIYQNGAENVEVLEEMEVDDASVFEVKTEMHEDDDFQCIIVIPEGEDINNAQIIIQDQEKQIDNAQDFFVETKRNVTVWNRRSKKRLLSLHLKYLRTHKGREINSREMWTEIASQLEEKTPASCRKMLIKLKNQYKLDKDSILSAYQPLLDKILAFKPKYAKCNKAKVLEDITDYNDVPISDDKVFNALNYYLQNLEDFVSPKFEKNYLWTELAKFISEPVTNIYSKINYLKQNFDNEIETPFREILQIIVAKENALKDDINKDLNPAREEEVEEQNWSDLEIERLLTWYLAHLDKFKNPKFVRSYLWMEASDILKKSPLVCSKKMLEIRSQYRSMVKENPEELNNWKFYNLCQRIYGTGKKSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00958623;
90% Identity
iTF_00958623;
80% Identity
-