Isal017677.1
Basic Information
- Insect
- Ithomia salapia
- Gene Symbol
- -
- Assembly
- GCA_028829205.1
- Location
- JAPOND010000430.1:18442-20364[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.4e-08 4.8e-05 23.7 0.1 6 40 15 52 10 57 0.82
Sequence Information
- Coding Sequence
- ATGGTCAAtaagtataaaagaaaaacttcaAATGCGTCCTGGGATGAGGCAGTTATGAAGTGTGCTATGGAAGAAGCTGGCAAAGGTTCTGTCAACGCTGCAGCCAAGAAATACGGCATAAATCTGTCAACGTTACAGCGGCATATTAAAAAAGGTAGCTCGGAAAAAAAACTTGGAAGGTACACAACTGTCTTTACGACAAGTCAAGAAAATGAACTTCTTGATTATGTTTTTCATAtggatagtttattttttggacttACTAAAAAAGAATTTTTAGAGCTTGTGTTCCAGTATGCTCAGATTAATAACATTCCACACCCATTCAAAAATGAAACTGCTGGTGAAGATTGGTATCTGGGATTTAAGAACCGAAATCCAGGCTTGAGTCTTCGTCGTCCGGAACCAACATCAATAGCACGCGCTAGAGGTTTTAACAAACCACAAGTACTAAGATTCTTTGACTTACTCGAAGGAGAGATCGAAAAGCATAGCATTGACGCAACGCGCATCTACAACGTCGATGAAACTGGCATTCAAACCAACAGCAACAAACCTCCAAGAGTCCTCAGCAAGTCGGGCAAAAAACAAGTCGGCGTGATAGCAAGTGTAGAACGTGGTAAACTAACAACTGTGGTATGCTGCTGTAATGCAGCAGGGTCGTTTATTCCCCCGTTTCTGATTTTTGGTCGGAAGAGAATGGTGCCTAGGCTTTTGGATGGAGCTCCACCTGGATCCGTTGCAAGCTGTACAGACAATGGATGGATTAACGGCCCTATATTTTTGGAGTGGCTGCGACACTTTGTGAGTGTGACTAGGCCAACAcctgataaaaaaatcattttagtgATGGATAATCACGAATCGCATAAGTACCTTGAAGTCTTAGAGTATGCTTCAAAGCATAATGTCATTTTTGTGTCTCTACCACCACACACGACACACCGCTTACAACCACTTGATACATGTGTATACGGAccattgaaaaattattttgagcagtctatttcattgtttcaacGAACACATGTAGGGCGCATCATATCACAGTATGATGTGGCAAAATTATTTGGCGAGGCCTATATTAAAGCGGCTAGTGCACATAATGCAATAAAAGGATTTACTTCTACTGGCGTATGGCCAACCAATCGACATATATTTAACGACGGTGATTACATGCCAGCCAGTATGACTGATAGACCACAGCCATTAACTGAAAATGAGACTGAGTCACTTGCTAATGATCCAAAGATATCTGTTGGTCATAACGAACATCATGTTGAAACAGCTCTCCTCTATGATGCAAATATTCGATTATCTTTCGATTCTGACCGCACCGTGTCACCGTCTGTTTTGAATCAAAATGTGGACAATAATTTGCCTATGGAAGAAAACGAACCCGTACCGCAACCTTTTAATGAACCTATAAGTTCGCGCAATACTCCAACTTCAGTTATTCAATCTTTTTATGAACCTTTAACACCATGTAAGACTTTACCACAAAAACAGCATACAACCCCACTGAACATCAGGCCACTACCTCAAATGATCCCACAAAAAAGTACTCGAAGGCGTAAGCCACAGAAAGCTGAAATACTTACAAGTACACCGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTTCCAAAAACGAAAATTGAcgccataaataaaaatttaaaggaaattaaaGCTTCTAcaagtaatattacaaagagacaGGCAAAACCCAAACGTGGTCCAAAAGGTAAAAATGAGGAAACTGAATATTCATGCTTGGTTTGTTCTGAGTTATATGTACACCCACCTATCGAAGACTGGATCAGATGTGATGACTGCCAAATGTGGGCTCACGAAGCGTGCACTGAATATTCTGGTAGAGGCTTTTATTACTGTGATGCTTGTCAAGAATAA
- Protein Sequence
- MVNKYKRKTSNASWDEAVMKCAMEEAGKGSVNAAAKKYGINLSTLQRHIKKGSSEKKLGRYTTVFTTSQENELLDYVFHMDSLFFGLTKKEFLELVFQYAQINNIPHPFKNETAGEDWYLGFKNRNPGLSLRRPEPTSIARARGFNKPQVLRFFDLLEGEIEKHSIDATRIYNVDETGIQTNSNKPPRVLSKSGKKQVGVIASVERGKLTTVVCCCNAAGSFIPPFLIFGRKRMVPRLLDGAPPGSVASCTDNGWINGPIFLEWLRHFVSVTRPTPDKKIILVMDNHESHKYLEVLEYASKHNVIFVSLPPHTTHRLQPLDTCVYGPLKNYFEQSISLFQRTHVGRIISQYDVAKLFGEAYIKAASAHNAIKGFTSTGVWPTNRHIFNDGDYMPASMTDRPQPLTENETESLANDPKISVGHNEHHVETALLYDANIRLSFDSDRTVSPSVLNQNVDNNLPMEENEPVPQPFNEPISSRNTPTSVIQSFYEPLTPCKTLPQKQHTTPLNIRPLPQMIPQKSTRRRKPQKAEILTSTPXXXXXXXXXXXXXVPKTKIDAINKNLKEIKASTSNITKRQAKPKRGPKGKNEETEYSCLVCSELYVHPPIEDWIRCDDCQMWAHEACTEYSGRGFYYCDACQE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00842601; iTF_00842602; iTF_00842603; iTF_00842604; iTF_00842605; iTF_00842610;
- 90% Identity
- iTF_00842604; iTF_00842605;
- 80% Identity
- -