Isal018791.1
Basic Information
- Insect
- Ithomia salapia
- Gene Symbol
- -
- Assembly
- GCA_028829205.1
- Location
- JAPOND010000830.1:131922-140068[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-09 1.7e-06 28.4 0.0 5 41 19 55 15 59 0.78 2 2 2.4 1.6e+03 -0.4 0.0 25 39 378 392 377 397 0.78
Sequence Information
- Coding Sequence
- ATGCCAAGAAATCGTGAAAGGACCACCGCTAAAGCGGGTTGGACCCAAGAAAATCTTCAATCTGCTAAAACTGCGATTGAAGGAGGTTTGTCTAAAAGAAAAGCCGCAAAACAATATAACATACCATTTACTACTTTAAGAGATCGacttaaaaatgaaaacataagTAACCCGAGACTAGGTCGCAAGCCCGTTTTCACCCAACAGCAAGAAACTGAAATTGTTAAACAAGTTAAGTTGCTGGGTTCGCTTTACTATGGGTTCAATGTCGCAGAATTGCGTaaagttgtttataaatatgctGAGCTCAACAATATCAAAGACAATTTTGATCAAAGCAGCAAAACAGCTGGATTAGATTGGGTACATGCCTTTATGAGACGCAACCCTTCAGTTTCTATACGAAAAGCTGAAGCGACAAGCTTAAATAGAATTTCTGCTTTCAACAAAGAAGAAATTACACATTTCTATGATAAACTTGGCGATTTAATggaaaaacaaaagtttatttcCAACATCTACAATGCTGACGAAACTGGAATCACCACGGTGACAGACCCAGGAAAAGTACTCGCAGAAAAAGGACAAAGAAGAGTCGGATCTGTTACAAGCGGCGAACGAGGAAGCAACACAACAGTTATGTGTGCGATGAGTGCAGCCGGAAATTTCATACCGCCCATGTTTATTTTTGCCAGACAGAGAATgacatatttattagaaaaagatGGGCCAGCTGGTGCAATATACACCAACTCTAAAAATGGCTGGATAAACGAAGATTTATTTGTCACTTGGCTCAAACATTTCGCAGCATTTGCTAAGCCTACCCAAGAATCACctgttttgttaattattgaCAATCACAGCAGTCACATTTCCCTTCAAGCTTTTAATTTCTGCAAGGAAAACCATATCACAATGCTTTCCATTCCACCGCACAGTTCTCACAGAACACAGCCGCTGGATGTGTCATTTTATGGGCCGCTGAAAACTGCTTATAGGCTTGAATGCAACAGGCACATGAAGACACATTTAATCTCTAAGATaaaatataaatgtttgacGATTGATGAAAAGAAGAAGTTAATCGAAAAAGTAAAGGAAGGTGAGAAGAAAAGTGATGTTGTAAAAGAATTTAAGATTCCTCTGAGTACTCTCTCAACCATAATAAAGCATAAGGAGAAAATTGAGGCTGTTCAAACTGCTGGAGTACGGAAAAAATCTCTGGACAAGCAGTTAACTGCAAATATCACGGTTCTGACAGCTATTTTACTGATTGACAAGGCATGGAGAGCTGTAACACCCCTAACTATTCTCAACTGCTTCAAAAAATCCGGTTTCTTCAAAAAAGATCAGGAAAATTTTCCAATACTTATGGATGATCAAGAACCAGCAATAGAACCATTAATTGACATTAGCGATGTGAGTTTTCTTGACTTTGTTCAAGTGGATGAAGATGTTGCTGTCTCAGGTACACTAACCGATGTCGAAATTTTATCTGCGACAGATACTAATGACAAAAGTAACGATGAGGACGATACATCAGAACCTTTGGCAGAAGTCGCAACTATTTCGGATTGGTATAACTACTGTCGTGAGGCAGTAGTATTGTACCAGCTGGACCAACAacaaaataaaggaaaaatagGAGGTCCACGAAAAATTGTACAGATTGATGAGAGCAAGTTTGGGAAGCGAAAATACAACAaagGACATTGGGTCCTGGGAATGATAGAAGACGAAAAGGAAGAGTTAAGGCTGGCGGTTTGTAGTGGCAATGACCGGTCAACCACAATTTGGGTGCCGTtagtaaaaacacattttttgggAGGCACCATCATAAACACCGATGGTTGGAGAGCTTATAACTGTCTCAGTGACCATGGATTAATCCATAAAAAAGTCAACCACAGTGACCCAGAGAACCCATTTGTCGCTGAAAACAGGACTCACACCAAAAGAATTGAGTACCAATGGAGagtgCCTGGCACACAACTACTACCACCACCATTGTTTCCAtctaattataaagttaatcgTTTCCAAGCACTGCTGGCTTGA
- Protein Sequence
- MPRNRERTTAKAGWTQENLQSAKTAIEGGLSKRKAAKQYNIPFTTLRDRLKNENISNPRLGRKPVFTQQQETEIVKQVKLLGSLYYGFNVAELRKVVYKYAELNNIKDNFDQSSKTAGLDWVHAFMRRNPSVSIRKAEATSLNRISAFNKEEITHFYDKLGDLMEKQKFISNIYNADETGITTVTDPGKVLAEKGQRRVGSVTSGERGSNTTVMCAMSAAGNFIPPMFIFARQRMTYLLEKDGPAGAIYTNSKNGWINEDLFVTWLKHFAAFAKPTQESPVLLIIDNHSSHISLQAFNFCKENHITMLSIPPHSSHRTQPLDVSFYGPLKTAYRLECNRHMKTHLISKIKYKCLTIDEKKKLIEKVKEGEKKSDVVKEFKIPLSTLSTIIKHKEKIEAVQTAGVRKKSLDKQLTANITVLTAILLIDKAWRAVTPLTILNCFKKSGFFKKDQENFPILMDDQEPAIEPLIDISDVSFLDFVQVDEDVAVSGTLTDVEILSATDTNDKSNDEDDTSEPLAEVATISDWYNYCREAVVLYQLDQQQNKGKIGGPRKIVQIDESKFGKRKYNKGHWVLGMIEDEKEELRLAVCSGNDRSTTIWVPLVKTHFLGGTIINTDGWRAYNCLSDHGLIHKKVNHSDPENPFVAENRTHTKRIEYQWRVPGTQLLPPPLFPSNYKVNRFQALLA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -