Isal005262.1
Basic Information
- Insect
- Ithomia salapia
- Gene Symbol
- Mblk-1
- Assembly
- GCA_028829205.1
- Location
- JAPOND010000031.1:253642-273049[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-14 1.3e-11 44.7 0.0 1 38 247 285 247 289 0.95 2 2 1.2e-15 8.1e-13 48.6 0.0 1 35 453 488 453 494 0.93
Sequence Information
- Coding Sequence
- ATGGGTCGACGAAAATGGAAACTATATCAAGACGGATTGATACCAAAACGGATAGAGGGCGAGCCCTCGAGCGACGACGATTCCATTGTTGCGTCAGACCCCCCTCCCGGTCTCAAGATCAAGACCATAGAGCAGATCAACGCGCCGGAGAGACAGGAGAGAGAGAAGCGCCCGGAGACCATCTTAGAGAGTCTGATCAAGAGGCCTGCGACCCAACCGAAGGTGGAGGTCCCCGAGGAGCCCTCGGACTGGAAGCCCCCCGACCGGTGCTACTTCTGCGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGCGGGAGCCACAAGTCCCGCGTCGGAGTCCGACAGCAGCTCGGTGTCGGGCGCCAAGAGCCCTGCAGGCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGACAGAACCCTCAAGCCTTCACCCAGTTCCAGCAGATGATAGCGGCGCTGGCGGCGCTGGGCACGGGGCTGGTGCCGCCGCTGTCACAAGCCTGGATGATGCAGAAGATGATGAGCCGCCCGCAGACAGAGAGGTTAGACGACAAAGCGCCGAGCTCGTCTCCAACCATCGCGGAACAGCCCCTGGACCTTAGCGCCAAGTCCACCTCCAGCACCAGCGGGACTCCTCCCCCCGAAAAAACCCAGGACAACACAAGATTAAAACGATCAGTGCTGGATGGGTCTGGGAACAGCACGAGGCGCGCGTATACAGAGGATGAGTTACAGTCAGCCTTACGAGATATTCAGTCGGGGAGGTTGGGGACGAGACGGGCGGCCGTCGTGTACGGCATCCCCCGTTCCACCCTCCGGAACAAGGTCAACAAGTTCGGTCTCGCTCCGGACACCGGACAGGAATCTGACCCCGACAGCGAACCGGAAAAGCCCGACTCCCCGCCGTCGGTTATCCTCAAAATACCGACCTTCCCGCCGCCTGACGATAAGAGCCCCTCACCGGCAGGCCCGGTGACAGCCCCCGTGACTCCACTCACGCCCCTCCTTCAACCTCAGCCGCCTCTCAACCCAGCCTCGCAGCTGCTGCTTTCTCCGTCGGTCTTCGCGGATCCCTCTACCCCCCGGCATCTCTTCACGTCGTTGAACGACGTCATAGCCAAGAGCATCAGCCAGAAGTTTCAACAGCCGCTCGATAGGCCTCAGCCGTCAGAGCTGCAGTTCCTCCGCGCACCCGACCGCCACGTATCCGTCATAAAGACGCCACCCGACCAGCGGTACGGGATGCCGAGCAACTCCAAGGCGACCTCTAACAACAACGGCCAGCCTGCAACCGGCAAGGGTACGCGGCCCAAGCGCGGCAAGTACCGCAACTACGACAGGGACAGCCTCGTGGAAGCCGTGAAGGCGGTGCAGCGCGGGGAGATGTCCGTGCACCGCGCCGGCTCGTACTACGGCGTGCCGCACTCCACGCTCGAGTACAAAGGCTACCCCGCCGGTTACCCGTTCTGGGCGGGCGCCGGGTTCGCGCCGCACGCGCCGCCGGACCTCTACGCATCGCACATGATGCGGCGTCTGCGAGAGGAGGCGCCTCCGCCCGCCAACGGCTCCTTCCTGGAGGGCATCATTCGCTCGAGTCTGCAGCGGCCGGGCGCACCACCTGCGTCTCCACCCGGCGCGGGGGGCGGAGCGCCAGAGCCCGGCCTGCGGCGGCGCGCCGACGGTGGCGACGAACCTGCGGCTCGACGAGCGCGTCTCGACGCCGACCACCAGCTAGCGGCCGACATGCGGGAGGCGACCGTCGCTGTAGTCCCCGGCGCCGCCGTGCTCGTGgcgcgtgacgtcacatgcGCCTCTGTGTCGGAGCGCAACACCGCGGCCGCCTCGTCACCAGGTTGTCCTACATTTTTCCTGATTCCGAAAGCCTCATTTTAG
- Protein Sequence
- MGRRKWKLYQDGLIPKRIEGEPSSDDDSIVASDPPPGLKIKTIEQINAPERQEREKRPETILESLIKRPATQPKVEVPEEPSDWKPPDRCYFCVXXXXXXXXXXXXXAGATSPASESDSSSVSGAKSPAGPXXXXXXXXXXXXGQNPQAFTQFQQMIAALAALGTGLVPPLSQAWMMQKMMSRPQTERLDDKAPSSSPTIAEQPLDLSAKSTSSTSGTPPPEKTQDNTRLKRSVLDGSGNSTRRAYTEDELQSALRDIQSGRLGTRRAAVVYGIPRSTLRNKVNKFGLAPDTGQESDPDSEPEKPDSPPSVILKIPTFPPPDDKSPSPAGPVTAPVTPLTPLLQPQPPLNPASQLLLSPSVFADPSTPRHLFTSLNDVIAKSISQKFQQPLDRPQPSELQFLRAPDRHVSVIKTPPDQRYGMPSNSKATSNNNGQPATGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKGYPAGYPFWAGAGFAPHAPPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLQRPGAPPASPPGAGGGAPEPGLRRRADGGDEPAARRARLDADHQLAADMREATVAVVPGAAVLVARDVTCASVSERNTAAASSPGCPTFFLIPKASF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01033645; iTF_00461479; iTF_01034457;
- 90% Identity
- -
- 80% Identity
- -