Isal000491.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ithomia salapia
Gene Symbol
JARID2
Assembly
GCA_028829205.1
Location
JAPOND010000006.1:8424617-8435275[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.3e-15 9.6e-12 45.8 0.0 6 89 747 827 743 827 0.90

Sequence Information

Coding Sequence
ATGAAGATGAAAGTGCAAGCTCAACGCAAATTTGCTCAAGGAGCTGTCATACCACCTACTTTAAATATTGCCTCTGTGAGCATTGATCGTAGAATTGATGTTTCACCTAACaaggaaaaaaacatatttcacaaCAGAACCTCTGCAAAGTCGCTGTTAGATATTgtctcatttaaaaatTTACATAAACATGCCCAGCCAATAGTATTGTTGGAGCGATTGGAAAACCAGCACACACTAGGTTCAAAAGATCATTCCGGAAACTCAATAACCATCGCTAGTAAACCTAGTACaggcattttaaataaaataaatcatgaacCAAAACAAGCAAACAGTGATAATGCGCGTGTAGCACCAGTTCGCCatcaaaaaaatagtaaaacaccAATAATAACACCAAGCCCTCCAATGCGATTACGATCACGAATACTCAATTCCAAAGACTCTAATAAAGcctacaaaaagaaaaattccATCAAGGATCGTAAGAGAGTTATTGCAAGTGCGCGcaaacgaaaaattaaaaagcggCCACAGAGGGTAGTTGATGAATTTTCTAATGATGACGACCAACCTTTAACATTCTTCAGGAAGAAGACGTTAAGAGTCCGTCGACATAAGATGGTAAAGcagaagaaattaaaatttaaaaacccaAAGTCAGttaaataCTCCGAGCCACTCCGTAAACTTAAGGAAAAAATTGTACGACGTATATTAGATGTGCCAGACATTTGTTCAGAGACATCTGATGCAGAACATCCAACATCAGAATTAGATCAAAACCTGATACCAGAAACAGTATCAATATATGATGACCCTGTCCCAAGCACCTCAGCAGCGTCAATATATGAAGATCCTGTCCCAAGCACCTCAGCAGCATTGGTATATGAAGACTCTCTCCCAGGGACACCATCTACTTTGGAGCCTGTCCCAAGCACTTCAACAACATCAGTATATCAAGATCCTGTCCCAGGGACATCATTCTGTCAGCATCAAGTTCCTATGCAAGcaACAATATTATTGAAGAAACCTCCGTTTTACGGTATAAAAGAAATAGAGAACTGGATGTCATCTGATATGACTTTTGTAGCGCCACTTCCTCAAGTCTCGACTAGAAAGTCTTCAAGAAACCGTAGTGATCCGAATTTAAATACTGAAATTGACTTAGAAATATGTATTGGATCAAAGTTATCATCAGTGgcagatataataaaatatgggcCAAGTTTTTACGAACGTTTATGTCTCAATTGTGATAATTGTAAAAGTATTCATGAGTTATTAAACCAATATATGACTAATTCTTTAGcaatcatgaaaaaaataatagatccTGAGGTAAATGCGAATAATAATCAAAGTTTGTCCAACACTGTTACTAGTGACACAAGAACTGGAGATACAGATCTCCTTTATGTAACTGTCGATGATGACGATGCTAAAGACATCAAAACTATTGATTTGACTGATGACAGTAATGATGTCAATTTTGTAAGAGACTTGCCTTCACAAAATGTTGTTCGGCATGATATACCAGTAACAGATGATGTCGGGAATGAAGTACCGGCACAAAATGTTGTCCAGCATAAAACgctaatacaaaatattgatcAACATGAAATGCTGGAACAAAATGTTGCCCAGGATGTAATCCCAGAACAAAATATTGCCCAGGATGTAATGCCGGACCAAGATGATGTTCAGCATGAAATGCCAGAACAAAATATTGCCCAGGATAATATGCCAGAACAAAATATTTCCCAGGATAGTATGCCAGAACAAAATGATCTCCAACATGAAATTCCGGTACAAAATGTTGTTCAGCAAGCAGTACCTGGTAGAAAGAAAACACCTCCGGTTCGTGGTAGAAAAAGAGGCAGAAGTAGACTAGTCTGTGGTCCTATAACAAGGCAAAAAACTCAAGCCACTGCCAATACTAAAGTCAAAAGGAAGAAgaaaaatactgaaataataGATCCAAGTCTACCTAAAATATTGCAAGGTGCTGATTTTATAGATGCTCCAGTATTTTCTCCACAGCCAGAAGAATTTttggaTCCAATGGAGTATTTGGAAAGTGTTATGCCCTCAGCTGCAGAGTTTggactatttaaaataattgcacCAAGGGGTTTCCAGCCTCCTTGTACAATGGGAGACAATGCTAGATTCACAGTCTCAAATCAATATATTGCTCGACTCTTCAGCCGTTGGGGACCCGCTGCAAGAGAAATGTGTACCATCCGTGCATATTTAGCATCGCAGAAGGTGTTTTTTTCCCGAGCGCCcttgCTTGATGGCTTGGAAGTAAATTTACCAAAACTGTTTCACACTGTCCAAAAACTTGGCGGCTTGAAatcagtatttaataaaaagaaatggaCCCGAGTTGCTGAagagttgaaaataaaaactatacccAATCCTGAAAAGAAGTTTGATTTATTGTGTCTGAAATATTTGCTGCCATACGACACCTTGACTAAAAAACGTCAAGCCATAATGACTCAAGTTGAACAAGAATGGGGAAAAAAAAGCGCTAAAATGTTATCGCGAGTTGTAAATCCGCTTCATCAACAAAAACGATTACTAGGTGATTCTGACTCATCNNNNNNNNNNNNNNNNNNNNNNNNNATTTATGTACAAGCGCTCATCGAGTCTGAAGACTGTGTGGTGCCAGGTAGAAAAATGAGTCTCGGGGCATTTAAAaagatcgCGGACACTGcacttaaaatgtatttccCGCCGGGAGATCCACCGCCCACAACAGCCGCTGTCGAAGATGAATATTGGAAAATAGTACTCCTGGGTACAGACCACGTGAGCATCAATGCTGCGTTCATTGATACCGGCCCAGAAGGCTACGGCTTcgccaaaaataaaaatgcagcATACGGAAAGCATCCTTGGAATCTAAAGAAGCTGAGtagcaacaaaaaaaatattctacgcTATCTTGGTTTGGTGTCGGGTGTGACAATTCCCTCGCTGCATGTGGGTATGGTGTTTTCCACCAGTTGCTGGCATCGTGACCCTCATGGCCTCCCTTGGATCGAGTACATGCACCAGGGGCCAGATAAGATTTGgtatGGCGTACCGGAAGGACAAAGTTCGAATTTCCGCATTGCTGCAGAGACGTTATGCCCTACATCTTGCCAGCAAAAGCCTATATGGTTGTCATCTGACATTGCAATGATCCCGCCTAACTTGTTGCTGGATCAAAATGTTCGTTTATCGCGTATTGTTCAAAAACCCGGAGAATTCATAGTTGTTATGCCGAGGGCATATTCCTGTTCGATATCCACCGGTTTTACTATATCAGAGAGTGTATACTTTGCCACGAACTCTTTTCTCCAAAATGTCTACCCAGTGTTTCagGAGCTGCGGGAAAGCTGTGAGCCATCGACATTTTCATTGGAGCAACTTTTGATATCTATGTCTAAGGACCCGCGCACTCCGCGTTACTTGCAGCAGCAAGTGCACGGATATCTCAACACTATAGTGAGTCAGGAACACGTATACCGGAACGCCCTCGCAGAGTTAAAAGTGCCGttGCAACATGTTAAACGACGCGTGGCATCATGGAACTTACGAGACGAAGAGGAATGTCAAGTTTGTCGGACTGCGCTGTATTTGTCGCGGGTTACGGGAGTTATTGGAAAGAAGTCCAAACTTTGCCAACAACATGCATTGAGAGTTTTAAATGACCGCAAGGAAGAGGGCAAATTAGACCTCACTGGAATAGTATTGGAAGTGTCCATGACTTCTGACGAACTGGATGAGCTTATACGCAACTTGCAAAAGCAATTACTATCCAGCCAGTAA
Protein Sequence
MKMKVQAQRKFAQGAVIPPTLNIASVSIDRRIDVSPNKEKNIFHNRTSAKSLLDIVSFKNLHKHAQPIVLLERLENQHTLGSKDHSGNSITIASKPSTGILNKINHEPKQANSDNARVAPVRHQKNSKTPIITPSPPMRLRSRILNSKDSNKAYKKKNSIKDRKRVIASARKRKIKKRPQRVVDEFSNDDDQPLTFFRKKTLRVRRHKMVKQKKLKFKNPKSVKYSEPLRKLKEKIVRRILDVPDICSETSDAEHPTSELDQNLIPETVSIYDDPVPSTSAASIYEDPVPSTSAALVYEDSLPGTPSTLEPVPSTSTTSVYQDPVPGTSFCQHQVPMQATILLKKPPFYGIKEIENWMSSDMTFVAPLPQVSTRKSSRNRSDPNLNTEIDLEICIGSKLSSVADIIKYGPSFYERLCLNCDNCKSIHELLNQYMTNSLAIMKKIIDPEVNANNNQSLSNTVTSDTRTGDTDLLYVTVDDDDAKDIKTIDLTDDSNDVNFVRDLPSQNVVRHDIPVTDDVGNEVPAQNVVQHKTLIQNIDQHEMLEQNVAQDVIPEQNIAQDVMPDQDDVQHEMPEQNIAQDNMPEQNISQDSMPEQNDLQHEIPVQNVVQQAVPGRKKTPPVRGRKRGRSRLVCGPITRQKTQATANTKVKRKKKNTEIIDPSLPKILQGADFIDAPVFSPQPEEFLDPMEYLESVMPSAAEFGLFKIIAPRGFQPPCTMGDNARFTVSNQYIARLFSRWGPAAREMCTIRAYLASQKVFFSRAPLLDGLEVNLPKLFHTVQKLGGLKSVFNKKKWTRVAEELKIKTIPNPEKKFDLLCLKYLLPYDTLTKKRQAIMTQVEQEWGKKSAKMLSRVVNPLHQQKRLLGDSDSSXXXXXXXXIYVQALIESEDCVVPGRKMSLGAFKKIADTALKMYFPPGDPPPTTAAVEDEYWKIVLLGTDHVSINAAFIDTGPEGYGFAKNKNAAYGKHPWNLKKLSSNKKNILRYLGLVSGVTIPSLHVGMVFSTSCWHRDPHGLPWIEYMHQGPDKIWYGVPEGQSSNFRIAAETLCPTSCQQKPIWLSSDIAMIPPNLLLDQNVRLSRIVQKPGEFIVVMPRAYSCSISTGFTISESVYFATNSFLQNVYPVFQELRESCEPSTFSLEQLLISMSKDPRTPRYLQQQVHGYLNTIVSQEHVYRNALAELKVPLQHVKRRVASWNLRDEEECQVCRTALYLSRVTGVIGKKSKLCQQHALRVLNDRKEEGKLDLTGIVLEVSMTSDELDELIRNLQKQLLSSQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-