Basic Information

Gene Symbol
XBP1
Assembly
GCA_028829205.1
Location
JAPOND010000090.1:1793203-1794545[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.3e-18 2.9e-15 56.7 2.3 2 52 44 94 44 96 0.97
2 2 3.7e-05 0.045 14.4 0.8 33 56 89 112 88 117 0.89

Sequence Information

Coding Sequence
ATGAGTACGCCGATAATTATAACGGTACCTAATAATTATCTGGCGGTGGACGATATGGAGTCGAAAGTTATTGTCGATGTTTCTCCTAGTCCACCGTCCAGAAAAAGAAGATTAGACCATCTAACTTGGGAGGAGAAGATGCAAAGAAAGAAGCTAAAGAACAGAGTAGCAGCCCAGACCTCACGAGACCGTAAAAAGGCAAAAATGGATGAAATGGAGGGCCATATACAGCACTTCATAGACATGAACGAGCGGCTTCTGAGCGAGGTGGAGAGTTTGAAAGCGTTGAACGAGCGACTTTTGAGTGAGAACGCATCCCTGCGCGAGGCAGCGAGGAGCGTCGCGGCGGCCCCGAGACCAGCGGAGTCTCATCCTCAGCAGaagGAGGGGCCCCCGCCGGCGCTCCCCGCTCTTCGCCTGCTGATGGCGATGTATGTAATCTCTCAGAATTACTCGAGCACCTGGACTCCCCCGAATACCTGGACACTCTGCACCAACTTGCAGACCAACTACTCCAAGAAATCGATGGCAATGCTGTGGGAGAAAATAAAGATgacaAAACCACCAGCATTACAAAATGCCTTGAAGGAGCTGAAATGGTGGGGCCCACAACAAAGCAACTGGAATCCAGTGAAAGTAGAGTCGTAG
Protein Sequence
MSTPIIITVPNNYLAVDDMESKVIVDVSPSPPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMEGHIQHFIDMNERLLSEVESLKALNERLLSENASLREAARSVAAAPRPAESHPQQKEGPPPALPALRLLMAMYVISQNYSSTWTPPNTWTLCTNLQTNYSKKSMAMLWEKIKMTKPPALQNALKELKWWGPQQSNWNPVKVES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01034276;
90% Identity
iTF_01034276;
80% Identity
-