Ipal006591.1
Basic Information
- Insect
- Iselma pallidipennis
- Gene Symbol
- stc_1
- Assembly
- GCA_037464855.1
- Location
- JAZBHA010000604.1:43244-48274[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 2.7 1.3e+04 -4.0 1.6 15 19 252 256 251 256 0.81 2 13 0.15 7.1e+02 0.0 0.5 4 10 285 291 284 291 0.95 3 13 7.6e-06 0.036 13.8 12.5 4 18 300 314 298 315 0.93 4 13 9.5e-05 0.45 10.3 16.9 1 18 351 368 351 369 0.93 5 13 2.6e-08 0.00012 21.7 10.4 1 19 409 427 409 427 0.97 6 13 1.3e-07 0.00063 19.4 17.8 1 19 467 489 467 489 0.88 7 13 1.8 8.5e+03 -3.4 2.0 5 10 518 523 518 523 0.93 8 13 0.051 2.4e+02 1.6 12.1 1 11 529 539 529 551 0.90 9 13 3.7e-10 1.7e-06 27.6 14.9 1 18 556 573 556 574 0.99 10 13 2.5 1.2e+04 -3.9 0.9 6 10 603 607 602 608 0.59 11 13 0.00082 3.9 7.3 13.1 1 19 613 630 613 630 0.86 12 13 2.7e-08 0.00013 21.6 15.0 1 19 666 685 666 685 0.97 13 13 0.11 5.1e+02 0.5 15.3 4 19 697 714 695 714 0.93
Sequence Information
- Coding Sequence
- ATGTCGTATTGGGGCTCCTACGAGAATAATCCACAAGGAAATTTCGCAATATATAACCCAGAATATGTCGATTATGTTAACAATATGTCCTACCTATTTcctaattatcaattaaatcaacaacaacaacaacaccaacaccatcaAAACCATCAAAATGGCTATTATCAAGAACCAGGCCCTAGCCATACTGGTAATACTCAATCCGCCactaatcaacaacaagatttatcaacaacacgAAATACAGGTGCTGTAAAGAAACGTTTCACTGATAAGAATCAATCGACTAGAAgacattataataaaacaaaagaacgtaaagataataatgatgataagcGAGATTATAATGGAGGAGaaattgatttagaaaaaccaacgaatgacaataaaaagaatagaaataaaaataattattattataatcgtaATTATTATGGTGGAGATAAACGTAGTAATTCTTATAGAAATAATGgtagatttaataaatataatcatgataataatagtgataattttAGTGGTTATCGAACGAGATGGAGGCGATTTGATAAAAAGACCTTGGACGCTGCATCTCAACGAGAACGTTTAGAACAGATGTTAACACGTCATATATTAGAATGTTTAGTTTGTTGTGATAAAATCAAACCAATTGATAGGATCTGGACATGTGGACaatgttatttgattttacatttaaattgtaCGACAGCATGGGCGAATTCATcgaaaattgataatggttGGCGTTGTCCAGCATGTCAATTTGTCTATAAAACAATAccaaaacaatattattgttattgtcgtAAAGCAATTGAACCACGATCATTACCTGGTGTTTTACCACATAGTTGTGGTGAACCATGTATGCAGATGAATCGTTCATGTGATCATAGATGTTCAATATTATGTCATCCCGGACCATGTCCAGATTGTAATATAATTGTATCGAAATTATGTGGTTGTGGTAAAACTACACAACAGGTTAAATGCAGTTCAGATATACAAATATTATGTACATcaatttgtaacaaattaCTAGAATGTCAACAACATCATTGTCAATCTAAATGCCATACAGGTGATTGTGGTAAATGTGATGCAATTCTACAACAGATCTGTTATTGTGGTAAAGTTGGACGAAGTATCAATTGTAGTAATGAATTTAAGGGTGTTACATTGTATAGTTGTGGTGAGAAATgtggtaaattattgaaatgtggTAATCATTATTGTGGAAATGTTTGCCATGATGGTTCATGTGATGATTGTTCAAGAAATATTGAACAGATTAAAACTTGTCCATGTGGTAAATCGAAACTAACTGAAACTAGATCGTCTTGTTTAGATCCGATTCCATGCTGTGATAagATTTGTGGTAAAACTTTGAAATGTGGCCAACCATCAGCTCATCATACTTGCCGCCAACCGTGTCATGAAGGTGATTGTCCACCGTGTCCATCAACAACACTGGTACGTTGCCGTTGTGGTCATATGGATAAAGAAATACCATGTGAAGAATTGACGACAAAAGCTGATGATGCTCGATGCGAAAAAAAGTGTACAAAGaAACGATTATGTGGGAAACACCGTTGTAATCAACGTTGTTGTATAGAAATTGAACATATCTGTCCATTACCATGTAACCATTTATTATCATGTGGTCAACATCGTTGTCAACGTACATGTCATAGTGGCCGTTGTCCACCATGTATAGAAACCAGTTTCGATGAATTATATTGTGAATGTGGTGCTAATGTAATCTATCCACCAATACCATGTGGTACAAAACCACCAGCATGCAATAATCCATGTCCTAGATCAAGACCATGTGGACATGATGTTAATCATACTTGTCATACAGGACAATGTCCACCATGTACAGTTTTATGTAAACGTTGGTGTTATGGTAAACATGAACAACGTTCAGCCATTCCATGTTATCAAGAAGATTTTAGTTGTGGTCTACCATGTGGACAACCATTACCATGTGGTACACATAAATGTGATAAACCATGCCATTTAGGACCGTGTCCATTACCatgtaaacaaaaatgtacaGTTAAACGTACATTATGTGACCACCCATGTAATGTACCATGTCATCGACCACCATGTCCTGACACACCTTGTCGATTCACTGTGCCAATAACGTGTCAATGTGGCCTACAGAAGAGCACCCGTTCATGTATTGATCTAATCGATGAATATAAAGAGATTGAAATGGCTAATTTGAAAGATAAAATGGCGGATTTATTGAAAGAACAATCAGTTGATATTAGcgatattgttaataaaccaaaaaaaccatcaatattaaaaataTTGGAATGTAGCGAAGAATGTCGTGTAGTTGAACGGAATCGTCGTTTTGCATTAAGCCTCCAAATCCGTAATCCTGATTTAACTCAAAAACTAACACCACGTTATTCTGATTTTATGCGTCAATGGGCTAAAAAAGATCCACAATTCTGTCAACGTATCCATGataaattaactgaattaGTACAATTATCGAAACAAAGTAAACAGAAAAGTCGTTCATATTCATTTGAATCAATGAATCGTGATAAGAGACAATTTATCCATGAATATTGTGAACATTTCGGTTGTGATAGTGCTGCATATGATATGGAACCAAATCGTAATGTTGTTGCAACAGCTATTAAAGATAAATCATGGTTACCTAGTATGAGTTTAATGGAAGTTATACAACGTGAGAATGGACATAGGAAAGTGCCTGGACCGGTTTTGAGTAAAAGTTCGATAAGTAAATCGGAAAGTGTATCGTGGAGATTACCAGGAAGGGGATGTCCTGTGACGACCACATCATCAGCAACACCGccagcatcatcatcaagaGAAATTGTGGATTATTTTGATAATCCTCCACACTAA
- Protein Sequence
- MSYWGSYENNPQGNFAIYNPEYVDYVNNMSYLFPNYQLNQQQQQHQHHQNHQNGYYQEPGPSHTGNTQSATNQQQDLSTTRNTGAVKKRFTDKNQSTRRHYNKTKERKDNNDDKRDYNGGEIDLEKPTNDNKKNRNKNNYYYNRNYYGGDKRSNSYRNNGRFNKYNHDNNSDNFSGYRTRWRRFDKKTLDAASQRERLEQMLTRHILECLVCCDKIKPIDRIWTCGQCYLILHLNCTTAWANSSKIDNGWRCPACQFVYKTIPKQYYCYCRKAIEPRSLPGVLPHSCGEPCMQMNRSCDHRCSILCHPGPCPDCNIIVSKLCGCGKTTQQVKCSSDIQILCTSICNKLLECQQHHCQSKCHTGDCGKCDAILQQICYCGKVGRSINCSNEFKGVTLYSCGEKCGKLLKCGNHYCGNVCHDGSCDDCSRNIEQIKTCPCGKSKLTETRSSCLDPIPCCDKICGKTLKCGQPSAHHTCRQPCHEGDCPPCPSTTLVRCRCGHMDKEIPCEELTTKADDARCEKKCTKKRLCGKHRCNQRCCIEIEHICPLPCNHLLSCGQHRCQRTCHSGRCPPCIETSFDELYCECGANVIYPPIPCGTKPPACNNPCPRSRPCGHDVNHTCHTGQCPPCTVLCKRWCYGKHEQRSAIPCYQEDFSCGLPCGQPLPCGTHKCDKPCHLGPCPLPCKQKCTVKRTLCDHPCNVPCHRPPCPDTPCRFTVPITCQCGLQKSTRSCIDLIDEYKEIEMANLKDKMADLLKEQSVDISDIVNKPKKPSILKILECSEECRVVERNRRFALSLQIRNPDLTQKLTPRYSDFMRQWAKKDPQFCQRIHDKLTELVQLSKQSKQKSRSYSFESMNRDKRQFIHEYCEHFGCDSAAYDMEPNRNVVATAIKDKSWLPSMSLMEVIQRENGHRKVPGPVLSKSSISKSESVSWRLPGRGCPVTTTSSATPPASSSREIVDYFDNPPH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -