Ipal001978.1
Basic Information
- Insect
- Iselma pallidipennis
- Gene Symbol
- gata4_1
- Assembly
- GCA_037464855.1
- Location
- JAZBHA010000101.1:12225-28014[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.1e-18 1.1e-14 53.4 2.7 1 34 319 351 319 353 0.97 2 2 2.7e-18 4.7e-15 54.5 4.5 1 35 373 406 373 407 0.98
Sequence Information
- Coding Sequence
- atgcaAGTTGATAAAAGTGGTGTCGATACGCGATATGGTAGTGAAGATCAGGGCCAATATAGTCCCGCCTCTCAAACTGATGGGGCGGCACCGTCACCCCACTCCCGTGCAGCCACGCCTCTTGCATGTATCAGttatacaacaacagcaacaacccCTGGTGAAACGGAACAGGAGAATTATCACCCCACTGGGATACGTTCCGATGGGGGTGAATTTATGTTATTTAGTAATAATGGTCGAATGGATGAGgTACCACCAATGGAGGAATCATCTGGTACTGAATACCTTCAATTGGATTCTGTACATAATGTACCTACCAGTGGTACAAATAATGGTTCACCAAATGGTAGTGGTAGTTCTGGATCACCACGACGTATTGTTGCCTTTACACATTTAAACGACCAACAGCATCACcatcacaacaataataacaataataataaccataatAATGTGGAAAATTCACATTTGACACAATTAACGAACCATATCAGCTATACGGGGGAGATAGATCCTGGATTAAGTACGATCGCTGGCCCTCTGTATTCAAGAAGCCAGAGCTTCCCAACATCAGCAATGCCGTTTTATGGTACCGCATCACCGGAACTATCATCAACACAAACATCACAACTATGGACCAATACAGgTGTCAATCCCAATACAGGTCTAGTAGTGCCGGAAGTAACATCCACTTCTTCAACATCATTACCAGCATTTAATCGTCTTGCCAATTTCCATAATAACAACCATTCATCCCATCGTGGTAGTGTACCATATACTGTACAAAGTTCATCTACATATAGTGATTGGCAACAATATTCAGATTCGGCTGGTTcgattcaatataatttattaagtcCTGGTAATGGTCGAAATCGGAATATGTCAGcttcaacaacattaacagCAATTGATCATCGTACTGCTGAGTACTTCACCGAGGGACGGGAATGTGTGAATTGCGGTGCAATCGATACACCATTATGGAGACGAGATGGTACTGGGCATTATTTATGCAATGCCTGTGGTCTTTATCATAAGATGAATGGCATGAACCGGCCTCTTGTCAAGCAGCCTCGTAGATTGTCGGCTTCTCGTAGAGTCGGTTTAACTTGTACCAATTGTCGTACCAGTACCACATCATTATGGAGACGTAACAGTATGGGTGAACCTGTCTGTAATGCTTGTGGACTTTATTTTAAACTACATGGTGTGAATCGACCGTTAGCTATGAAAAAAGATAGCATACAGACAAGGAAACGAAAACCGAAAGGCAGTAAAGATACTGGAAATGCTCCAAGAAATATCAGTAATGTCCTGGAATCGACATTGAATAACATGAAAATGGAACAGAATTTAGCGCCTGTAAAACTTGAACACCCAATTGaaaattacgATATACGATCAACTTTAAACCATATCCAACATACTGGATCGGCGAATTACTATAATAATCAAGCCCATCAACGTCTATCACCATATAATAATCCATCACAACAGGCACATTTAGGTGGCAgtaatcattattatgatgTTATTCATcaaacaacagcagcaaccCCAAGtccaccatcaacaacatcacccAGTCCAAATTCACCacatattgtaaataataataataacaataataataataataatacaaaagtGATTATAAATGGTGATCATGATCATAATACTGACAGACCTACAGTAGTATCGATGTcttaa
- Protein Sequence
- MQVDKSGVDTRYGSEDQGQYSPASQTDGAAPSPHSRAATPLACISYTTTATTPGETEQENYHPTGIRSDGGEFMLFSNNGRMDEVPPMEESSGTEYLQLDSVHNVPTSGTNNGSPNGSGSSGSPRRIVAFTHLNDQQHHHHNNNNNNNNHNNVENSHLTQLTNHISYTGEIDPGLSTIAGPLYSRSQSFPTSAMPFYGTASPELSSTQTSQLWTNTGVNPNTGLVVPEVTSTSSTSLPAFNRLANFHNNNHSSHRGSVPYTVQSSSTYSDWQQYSDSAGSIQYNLLSPGNGRNRNMSASTTLTAIDHRTAEYFTEGRECVNCGAIDTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQPRRLSASRRVGLTCTNCRTSTTSLWRRNSMGEPVCNACGLYFKLHGVNRPLAMKKDSIQTRKRKPKGSKDTGNAPRNISNVLESTLNNMKMEQNLAPVKLEHPIENYDIRSTLNHIQHTGSANYYNNQAHQRLSPYNNPSQQAHLGGSNHYYDVIHQTTAATPSPPSTTSPSPNSPHIVNNNNNNNNNNNTKVIINGDHDHNTDRPTVVSMS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -