Basic Information

Insect: Iselma pallidipennis
Gene Symbol: Znf639_1
Assembly: GCA_037464855.1
Location: JAZBHA010000352.1:15703-18880[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 2.2e-05 0.00094 19.2 1.4 1 23 11 33 11 33 0.98

2 18 0.62 27 5.2 0.2 3 23 40 60 39 60 0.97

3 18 2.5 1.1e+02 3.3 3.5 3 23 68 88 66 88 0.93

4 18 6.1e-05 0.0027 17.8 1.5 1 23 94 116 94 116 0.97

5 18 0.00029 0.013 15.6 2.2 1 23 122 145 122 145 0.92

6 18 3.9e-06 0.00017 21.5 2.6 1 23 156 179 156 179 0.97

7 18 0.026 1.1 9.5 0.2 2 23 188 209 187 209 0.95

8 18 0.033 1.4 9.2 0.8 1 23 250 273 250 273 0.93

9 18 0.052 2.3 8.5 0.6 1 23 299 322 299 322 0.96

10 18 1.4 61 4.0 4.6 1 21 326 346 326 348 0.82

11 18 0.23 9.9 6.5 5.3 1 23 354 377 354 377 0.97

12 18 8.7e-05 0.0038 17.3 0.8 1 23 383 405 383 405 0.96

13 18 0.0069 0.3 11.3 2.2 1 23 411 434 411 434 0.93

14 18 0.00037 0.016 15.3 0.4 2 23 446 468 445 468 0.92

15 18 9.9e-06 0.00043 20.3 1.7 3 23 483 503 481 503 0.96

16 18 1.8e-06 7.8e-05 22.6 0.8 1 23 509 531 509 531 0.99

17 18 1.3e-05 0.00056 19.9 3.9 1 23 537 559 537 559 0.97

18 18 0.0019 0.083 13.1 0.1 1 21 565 585 565 586 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	2.2e-05	0.00094	19.2	1.4	1	23	11	33	11	33	0.98
2	18	0.62	27	5.2	0.2	3	23	40	60	39	60	0.97
3	18	2.5	1.1e+02	3.3	3.5	3	23	68	88	66	88	0.93
4	18	6.1e-05	0.0027	17.8	1.5	1	23	94	116	94	116	0.97
5	18	0.00029	0.013	15.6	2.2	1	23	122	145	122	145	0.92
6	18	3.9e-06	0.00017	21.5	2.6	1	23	156	179	156	179	0.97
7	18	0.026	1.1	9.5	0.2	2	23	188	209	187	209	0.95
8	18	0.033	1.4	9.2	0.8	1	23	250	273	250	273	0.93
9	18	0.052	2.3	8.5	0.6	1	23	299	322	299	322	0.96
10	18	1.4	61	4.0	4.6	1	21	326	346	326	348	0.82
11	18	0.23	9.9	6.5	5.3	1	23	354	377	354	377	0.97
12	18	8.7e-05	0.0038	17.3	0.8	1	23	383	405	383	405	0.96
13	18	0.0069	0.3	11.3	2.2	1	23	411	434	411	434	0.93
14	18	0.00037	0.016	15.3	0.4	2	23	446	468	445	468	0.92
15	18	9.9e-06	0.00043	20.3	1.7	3	23	483	503	481	503	0.96
16	18	1.8e-06	7.8e-05	22.6	0.8	1	23	509	531	509	531	0.99
17	18	1.3e-05	0.00056	19.9	3.9	1	23	537	559	537	559	0.97
18	18	0.0019	0.083	13.1	0.1	1	21	565	585	565	586	0.95

Sequence Information

Coding Sequence: ATGTTCCATAATCACGAAAAAATACATGGTTATTGTTGTGATATTTGTCCCGTATCATTTGAAAGTAAGCAAGATTTAgaacaacacacaaaaacacataaaatgaTGATACATGGATGTGAACAATGTCCATCAACATTTACTGCAACTTTTGATTTAGTTTTACATAATCGACAACATACAGGACGATCAAATGTGACATgtatttattgtcaattttcaaCCAACAATCATACAACAATGAAAGAGCACCTGAAAAAACATGAAGTTTCCTATGATTATATCTGTGATATTTGTTCGAAACGATTCTATAAAAGAAACCAAttaaatgtacataaacagatccatttatttattccgaaatatttgtgtgaattttgtgataagaaatttacaacatcACGTTATCTATACAATCATCGTATACTCAATCATTCCAAACAGATACATGGTATTGAAAATCGATTCATATGTGATGAGTGTGGACGTTGTTTTACATTTGAGAAAAGTTTAAAACGACACTTGAGTACAATTCATAATATTGGTGAAAATCGTCGAGTTCCTTGTCCTGTTTGTTGTAAACTCATCGCAAATCCATATAATCTAAAACTACATTTAAGAGTACATACCGGtgaaaaattGTCATCAAAATCGAAAAGACTAAGAAAACGTCGACAACCTCGAGAATCCGATGATGAATACGTACCACCAAGTCAATCTacaaatactgaaaaatctATACGTATTTATACATGTCGAAAATGTTTAGAACAATTTCCAAAACGAAAATTGTTAGAAGCCCATAATAAAGCCAGTCATCCAAAGAATGACGGTAATGATCgggatgatgataatggttcAACTCATTTTAAATATGACGCAGAACAGGAGGTGTTTATATGCAATATATGTTCAGCAGAATATCAGAATAAATCGGAGATTGAAGAACAtttcaaaaagaaacatttgTCTCAGTTCTGTTGTAATGAATGTGATGCAACATTCGATAATGCATATGCATTTAGTTGTCATAATCAACAACATAGTAAAGATAAGTTGTTCCGTTGCTCGTTCTGCTCCTATTCAACGAAACGACGTACTTGTATTTTACAACACATCAATCGAATGCATTACAACAAATTCTATTACTATTGCAAGACATGCGGTAAAGGTTTTAATGAtgcaatcaattttaaagagCACAATAATGAACATTTAGGTGTAAAACCGTTCGTATGTATTGTATGCAATAAATCATTTGTATATTCACGATATTTACATCTGCATCAGATCCGTTATCATACTGTTGGTATAGAAGGGCAAGTCAATCCGAAACAATGTCCGATATGTTTGAAGGTTTTCGCTAAAAAGATAACTCTAACGAAACACGTGTCGGCAAGACATTCAAAAACTACCAGAGGTGGGCCACGTGAAAAACGCCATTTATGTGATGTGTGCGGTAAAGGTTTTTCAACAAAAGATAAATACCGAATCCATTATCGAATACATACCGGTATTAAACCGTATACATGTAATTATTGTCCGAAAAGTTTCATTAAACGAGACTATTTAATAATGCACGAACGTGTCCATACTGGTGAGAAACCGTACGCTTGTCATCATTGTGGTAAATGTTTCAATCAAACGGCACCGTTACGAATCCATATTCGAGGGCATACAGGAGAACGACCCTATGTTTGTACATTCTGCAATGCTGGATTTGTATCGAAAGGTGCTCTAAATATGCACCGAAAAGTCTGTTCTGGATCTACCGATtaa
Protein Sequence: MFHNHEKIHGYCCDICPVSFESKQDLEQHTKTHKMMIHGCEQCPSTFTATFDLVLHNRQHTGRSNVTCIYCQFSTNNHTTMKEHLKKHEVSYDYICDICSKRFYKRNQLNVHKQIHLFIPKYLCEFCDKKFTTSRYLYNHRILNHSKQIHGIENRFICDECGRCFTFEKSLKRHLSTIHNIGENRRVPCPVCCKLIANPYNLKLHLRVHTGEKLSSKSKRLRKRRQPRESDDEYVPPSQSTNTEKSIRIYTCRKCLEQFPKRKLLEAHNKASHPKNDGNDRDDDNGSTHFKYDAEQEVFICNICSAEYQNKSEIEEHFKKKHLSQFCCNECDATFDNAYAFSCHNQQHSKDKLFRCSFCSYSTKRRTCILQHINRMHYNKFYYYCKTCGKGFNDAINFKEHNNEHLGVKPFVCIVCNKSFVYSRYLHLHQIRYHTVGIEGQVNPKQCPICLKVFAKKITLTKHVSARHSKTTRGGPREKRHLCDVCGKGFSTKDKYRIHYRIHTGIKPYTCNYCPKSFIKRDYLIMHERVHTGEKPYACHHCGKCFNQTAPLRIHIRGHTGERPYVCTFCNAGFVSKGALNMHRKVCSGSTD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -