Basic Information

Insect: Iselma pallidipennis
Gene Symbol: -
Assembly: GCA_037464855.1
Location: JAZBHA010000352.1:1-6599[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 2.1 93 3.5 2.3 1 21 37 63 37 66 0.64

2 29 1.7e-05 0.00073 19.5 0.8 2 23 72 93 71 93 0.97

3 29 1.4 60 4.1 3.4 2 23 101 120 100 120 0.93

4 29 0.0017 0.072 13.3 0.4 1 23 127 149 127 149 0.96

5 29 3.4e-05 0.0015 18.6 0.2 2 23 156 177 155 177 0.97

6 29 0.019 0.84 9.9 0.1 1 14 183 196 183 198 0.90

7 29 0.00054 0.023 14.8 0.9 1 23 234 257 234 257 0.95

8 29 0.36 16 5.9 2.4 1 23 262 284 262 284 0.97

9 29 0.00026 0.011 15.8 1.0 3 23 292 313 290 313 0.93

10 29 0.0044 0.19 11.9 3.4 1 23 318 340 318 340 0.98

11 29 0.37 16 5.9 4.8 2 23 348 367 347 367 0.95

12 29 0.0028 0.12 12.5 0.0 1 23 374 396 374 396 0.97

13 29 1.5e-05 0.00066 19.7 0.8 2 23 403 424 402 424 0.97

14 29 1.8e-07 8e-06 25.7 0.7 1 23 430 452 430 452 0.98

15 29 0.24 10 6.5 2.6 2 23 484 503 483 503 0.93

16 29 0.0018 0.076 13.2 0.0 1 23 510 532 510 532 0.96

17 29 5e-06 0.00022 21.2 0.2 2 23 539 560 538 560 0.97

18 29 0.00042 0.018 15.1 2.5 1 23 604 627 604 627 0.97

19 29 0.29 13 6.2 2.8 1 23 632 654 632 654 0.98

20 29 5.4e-05 0.0024 17.9 1.8 3 23 662 683 661 683 0.93

21 29 1.9e-05 0.00081 19.4 0.7 3 23 690 710 688 710 0.96

22 29 0.0024 0.11 12.7 4.0 2 23 718 739 718 739 0.97

23 29 0.022 0.95 9.7 0.2 1 23 746 768 746 768 0.97

24 29 1.5e-05 0.00066 19.7 0.4 2 23 775 796 774 796 0.97

25 29 5.3e-07 2.3e-05 24.2 0.6 1 23 802 824 802 824 0.99

26 29 0.0048 0.21 11.8 0.6 1 23 838 860 838 860 0.97

27 29 0.00023 0.01 15.9 0.4 2 23 867 888 866 888 0.97

28 29 2.5e-07 1.1e-05 25.3 0.4 1 23 894 916 894 916 0.99

29 29 0.0012 0.053 13.7 1.8 1 23 922 945 922 945 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	2.1	93	3.5	2.3	1	21	37	63	37	66	0.64
2	29	1.7e-05	0.00073	19.5	0.8	2	23	72	93	71	93	0.97
3	29	1.4	60	4.1	3.4	2	23	101	120	100	120	0.93
4	29	0.0017	0.072	13.3	0.4	1	23	127	149	127	149	0.96
5	29	3.4e-05	0.0015	18.6	0.2	2	23	156	177	155	177	0.97
6	29	0.019	0.84	9.9	0.1	1	14	183	196	183	198	0.90
7	29	0.00054	0.023	14.8	0.9	1	23	234	257	234	257	0.95
8	29	0.36	16	5.9	2.4	1	23	262	284	262	284	0.97
9	29	0.00026	0.011	15.8	1.0	3	23	292	313	290	313	0.93
10	29	0.0044	0.19	11.9	3.4	1	23	318	340	318	340	0.98
11	29	0.37	16	5.9	4.8	2	23	348	367	347	367	0.95
12	29	0.0028	0.12	12.5	0.0	1	23	374	396	374	396	0.97
13	29	1.5e-05	0.00066	19.7	0.8	2	23	403	424	402	424	0.97
14	29	1.8e-07	8e-06	25.7	0.7	1	23	430	452	430	452	0.98
15	29	0.24	10	6.5	2.6	2	23	484	503	483	503	0.93
16	29	0.0018	0.076	13.2	0.0	1	23	510	532	510	532	0.96
17	29	5e-06	0.00022	21.2	0.2	2	23	539	560	538	560	0.97
18	29	0.00042	0.018	15.1	2.5	1	23	604	627	604	627	0.97
19	29	0.29	13	6.2	2.8	1	23	632	654	632	654	0.98
20	29	5.4e-05	0.0024	17.9	1.8	3	23	662	683	661	683	0.93
21	29	1.9e-05	0.00081	19.4	0.7	3	23	690	710	688	710	0.96
22	29	0.0024	0.11	12.7	4.0	2	23	718	739	718	739	0.97
23	29	0.022	0.95	9.7	0.2	1	23	746	768	746	768	0.97
24	29	1.5e-05	0.00066	19.7	0.4	2	23	775	796	774	796	0.97
25	29	5.3e-07	2.3e-05	24.2	0.6	1	23	802	824	802	824	0.99
26	29	0.0048	0.21	11.8	0.6	1	23	838	860	838	860	0.97
27	29	0.00023	0.01	15.9	0.4	2	23	867	888	866	888	0.97
28	29	2.5e-07	1.1e-05	25.3	0.4	1	23	894	916	894	916	0.99
29	29	0.0012	0.053	13.7	1.8	1	23	922	945	922	945	0.97

Sequence Information

Coding Sequence: TTGCCAATTCTAATCGATGACGATTCTGTCCAGTGTTCAGAATGTTCAAAAATAATGCTTCAAACTAGTTGGAAACGACATGTAGTAACACATTCCAATGATCGTCCACATATTTGtagaatttgtaaaaattcatttaaagaTCTTCGAGGTTTTCAACGAGAATCAGAACTTAGAGATCATATGACAGAACAACATCAAATTAATTCGTGGGTTTGTTCGATTTGTAAGAAGATTTACAAGTCTAAATGGTCATTACAGTACCATATGAAAAGCCATCAAGAAGAGAATTACAGATCTACATGTACCATATGCAATAAACAATATGCATGTTTAAGATTGCATATGAGAAAAATGCATAATGAGAATCGGCGAACATTTATTTGCGATTTATGTGGTAAAGAATTAACATCTTTACAAAGTTTAAAAGATCATAAGAATCTCCATGATGGTATAAAATCGATTGAATGTGATACATGTGGAAAACAATTTGCTAAGCGAACCTCATTAGTGATACACTTACGAATACATACTGGAGAAAAACCTTATGTTTGTAATATTTGCGAGAAAGCATTCTCGCAGCGTGGTCCGTTACCAATTACAGTCGGTGAGAATTCGGTACAATGTACAGAATGTTCAGAAATAATGCTTCAAACTAGTTGGAAACGACATCTAATAACGCATTCCCATAATCGTCCATACATTTGTAGCATTTGTAACCATTCATTCAAAGATCTTCGAGGTTTATCTATACATTGGCGATTTGTTCATAATTTACAGGATTATGAATGTGACTTATGCCACAAGAAAATGCAATTATACGAAACTCTTGTAAGACATCGTCGAGAACATTTAgaaaagaacagaaaaatgtGTCAGCTATGCAATAAAGGCTTTCAACGTGAATCAGAACTTAGAAATCATATGACAGAACAACATCAGATCAATCCATTTGTTTGTCCTGTTTgtagtaaaatttttaaatgtaattattcaCTAACAATGCATAAGAGACAACATCAGTCCGAGGATTATAGATCTACATGTACgatatgtaataaaaaatttgcatgtttaaaacaacatatgaaaaaaatgcataatAAGGATCGGCGAAAATTCATTTGTGATTTATGTGGTAAAGAATTAACGTCTCTTCCAAGTTTAATTGAACATAAAAATGTACATGATGGTGTCAAATCGATTGAATGTGGTATGTGTGGaaaaaaatttggtaaaaGACGGACGTTAAAGATTCATTTAAGGACACATACTGGAGAGAAACCgtatatttgtaatatttgcgGAAAAGCATTTTCACAACACTCTCCATTAACTATCCATCTACGAACACATACCGGTGAAAAACCATACGACtgtaatCTTTACAAGTCTAAAGTGGCATTAGAATACCATATGACACATCATCAAGAAGAGGATCGTAGATCTACATGTACCATATGCAATAAAAAATGTGCATCTTTAAGAAACCATATGAGAAATGTACATAATCAGAATCGGCGAACATTCATTTGTGATATATGTGGTAAAGAATTAGTGTCACGTGCAGGTTTAATACAACATAAAAATGCACATGATGGTGTAAAACCGATTGAATGTGGTGTGTGCGGAAAAAGATTTGGTAAAAGAGACACATTGCAGATTCATTTAAGGACACATACTGGAGAGAAACCGTTGCCAATTAGACTCGATGACAATTCGGTACAGTGTCCGGAATGTTTAGAAATAATGCGTCAAACTAGTTGGAAACGACATGTAATAAATCATTCCAATACTCGTCCATATCCATACATTTGTAgcatttgtaaaaattcatttaaagaTCTACGAGCTTTATGTACACACCGGCGATCTGTTCATACTTTACAGGATTATGAATGTGACCTATGCcacaaaaaaatgcaattgtATGAGAGTCTTGTAAGACATCGTCGACAACATTTAGAGAAGAACAGAAGAATGTGTCATCTTTGCAAGAAAAGCTTTGAACGAGAATCAGAACTTATCAATCATATGACAGAACAACATCAAATTGATTCGTGGGCTTGTTCTGTTTGTAAGAAGATTTATAAGTCTAAGCGGGCATTAGAACGTCATATGAAAAACCATCAAGCTGAGGATCAACAAGCTACATGCACCATATGCAACAAAAAGTATTCATATACGTATTTAAAACATCATATGAGAAAAGCACATATTAAGAATCGGCGAAAATTCATTTGTGATTTATGTGGTAAAGAATTAATGTCTCATCCAAGTTTAATTGAACATAAAAATGTACATGATGGTGTCAAATCGATTGAATGTGGTGAATGTGGGAAAAAATTTGGTAAAGCACGGACGTTAAAGCTTCATTTAAGGACACATACTGGAGAGAAACCATATGTTTGTGATATTTGCGGAAAAGCATTTTCACAACACACCCCATTAACTATCCATTTACggacacatactggtgaaaaaccatacaACTGTGAAAATCGGCGAAAATTCATTTGCGATTTATGTGGTAAAGAATTAATGTCTCATTCAAGTTTATTAGAACATAAAAATGTACATGATGGTGTCAAATCGATTGAATGTGGTGTGTGTGGTAGAAAATTTGGTAAAACACGGACGTTGAGGAGTCATTTAAGGATACATACTGGAGAGAAACCATatgtttgtaatatttgtgggAAAGCATTTGTACAACACTCTCCATTAACTATCCATTTACGGACACATACCGGTGAAAAACCGTACGACtgtaatgtttgtaatgaaaaattcattagTAAAAGCTCTCGTGATTATCATATGAAAACGAAACATCGAacattatag
Protein Sequence: LPILIDDDSVQCSECSKIMLQTSWKRHVVTHSNDRPHICRICKNSFKDLRGFQRESELRDHMTEQHQINSWVCSICKKIYKSKWSLQYHMKSHQEENYRSTCTICNKQYACLRLHMRKMHNENRRTFICDLCGKELTSLQSLKDHKNLHDGIKSIECDTCGKQFAKRTSLVIHLRIHTGEKPYVCNICEKAFSQRGPLPITVGENSVQCTECSEIMLQTSWKRHLITHSHNRPYICSICNHSFKDLRGLSIHWRFVHNLQDYECDLCHKKMQLYETLVRHRREHLEKNRKMCQLCNKGFQRESELRNHMTEQHQINPFVCPVCSKIFKCNYSLTMHKRQHQSEDYRSTCTICNKKFACLKQHMKKMHNKDRRKFICDLCGKELTSLPSLIEHKNVHDGVKSIECGMCGKKFGKRRTLKIHLRTHTGEKPYICNICGKAFSQHSPLTIHLRTHTGEKPYDCNLYKSKVALEYHMTHHQEEDRRSTCTICNKKCASLRNHMRNVHNQNRRTFICDICGKELVSRAGLIQHKNAHDGVKPIECGVCGKRFGKRDTLQIHLRTHTGEKPLPIRLDDNSVQCPECLEIMRQTSWKRHVINHSNTRPYPYICSICKNSFKDLRALCTHRRSVHTLQDYECDLCHKKMQLYESLVRHRRQHLEKNRRMCHLCKKSFERESELINHMTEQHQIDSWACSVCKKIYKSKRALERHMKNHQAEDQQATCTICNKKYSYTYLKHHMRKAHIKNRRKFICDLCGKELMSHPSLIEHKNVHDGVKSIECGECGKKFGKARTLKLHLRTHTGEKPYVCDICGKAFSQHTPLTIHLRTHTGEKPYNCENRRKFICDLCGKELMSHSSLLEHKNVHDGVKSIECGVCGRKFGKTRTLRSHLRIHTGEKPYVCNICGKAFVQHSPLTIHLRTHTGEKPYDCNVCNEKFISKSSRDYHMKTKHRTL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -