Basic Information

Insect: Iselma pallidipennis
Gene Symbol: HINFP_1
Assembly: GCA_037464855.1
Location: JAZBHA010000280.1:13096-15927[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 0.00028 0.012 15.7 4.9 1 23 17 39 17 39 0.98

2 29 3.6e-05 0.0016 18.5 0.3 2 23 46 68 46 68 0.96

3 29 2.7e-06 0.00012 22.0 1.3 2 23 72 93 72 93 0.97

4 29 6.9e-05 0.003 17.6 2.5 1 23 97 120 97 120 0.96

5 29 0.00029 0.013 15.6 0.1 1 23 132 154 132 154 0.98

6 29 7.8e-07 3.4e-05 23.7 0.4 2 23 161 182 160 182 0.97

7 29 8.6e-07 3.7e-05 23.6 0.6 1 23 188 210 188 210 0.98

8 29 2.1e-05 0.00092 19.2 1.1 1 23 216 238 216 238 0.99

9 29 2.8e-07 1.2e-05 25.1 0.6 1 23 244 266 244 266 0.98

10 29 0.0029 0.13 12.5 2.8 1 23 272 294 272 294 0.98

11 29 4.1e-06 0.00018 21.5 0.4 1 23 300 322 300 322 0.98

12 29 1.6e-05 0.00071 19.6 0.7 1 23 328 350 328 350 0.98

13 29 6.2e-06 0.00027 20.9 2.8 1 23 356 378 356 378 0.98

14 29 0.008 0.35 11.1 2.2 1 23 384 407 384 407 0.97

15 29 0.00031 0.013 15.5 3.0 2 23 421 443 420 443 0.93

16 29 0.0032 0.14 12.3 2.4 1 23 453 475 453 475 0.98

17 29 0.00046 0.02 15.0 0.8 3 23 483 504 482 504 0.97

18 29 3e-07 1.3e-05 25.0 0.9 2 23 508 529 508 529 0.98

19 29 0.00029 0.013 15.6 3.2 1 23 535 558 535 558 0.98

20 29 0.0013 0.055 13.6 0.1 1 23 565 587 565 587 0.98

21 29 2.9e-06 0.00013 21.9 1.0 2 23 594 615 594 615 0.97

22 29 1.4e-05 0.00061 19.8 0.7 1 23 621 643 621 643 0.99

23 29 1.1e-05 0.0005 20.1 1.4 1 23 653 675 653 675 0.97

24 29 0.0013 0.057 13.6 0.9 1 23 681 703 681 703 0.96

25 29 1.6e-06 7.1e-05 22.7 2.6 1 23 709 731 709 731 0.98

26 29 3e-06 0.00013 21.9 0.7 1 23 737 759 737 759 0.98

27 29 0.0001 0.0043 17.1 2.0 1 23 765 787 765 787 0.98

28 29 3.3e-06 0.00014 21.7 2.0 1 23 793 815 793 815 0.98

29 29 0.0083 0.36 11.1 0.3 1 23 821 844 821 844 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	0.00028	0.012	15.7	4.9	1	23	17	39	17	39	0.98
2	29	3.6e-05	0.0016	18.5	0.3	2	23	46	68	46	68	0.96
3	29	2.7e-06	0.00012	22.0	1.3	2	23	72	93	72	93	0.97
4	29	6.9e-05	0.003	17.6	2.5	1	23	97	120	97	120	0.96
5	29	0.00029	0.013	15.6	0.1	1	23	132	154	132	154	0.98
6	29	7.8e-07	3.4e-05	23.7	0.4	2	23	161	182	160	182	0.97
7	29	8.6e-07	3.7e-05	23.6	0.6	1	23	188	210	188	210	0.98
8	29	2.1e-05	0.00092	19.2	1.1	1	23	216	238	216	238	0.99
9	29	2.8e-07	1.2e-05	25.1	0.6	1	23	244	266	244	266	0.98
10	29	0.0029	0.13	12.5	2.8	1	23	272	294	272	294	0.98
11	29	4.1e-06	0.00018	21.5	0.4	1	23	300	322	300	322	0.98
12	29	1.6e-05	0.00071	19.6	0.7	1	23	328	350	328	350	0.98
13	29	6.2e-06	0.00027	20.9	2.8	1	23	356	378	356	378	0.98
14	29	0.008	0.35	11.1	2.2	1	23	384	407	384	407	0.97
15	29	0.00031	0.013	15.5	3.0	2	23	421	443	420	443	0.93
16	29	0.0032	0.14	12.3	2.4	1	23	453	475	453	475	0.98
17	29	0.00046	0.02	15.0	0.8	3	23	483	504	482	504	0.97
18	29	3e-07	1.3e-05	25.0	0.9	2	23	508	529	508	529	0.98
19	29	0.00029	0.013	15.6	3.2	1	23	535	558	535	558	0.98
20	29	0.0013	0.055	13.6	0.1	1	23	565	587	565	587	0.98
21	29	2.9e-06	0.00013	21.9	1.0	2	23	594	615	594	615	0.97
22	29	1.4e-05	0.00061	19.8	0.7	1	23	621	643	621	643	0.99
23	29	1.1e-05	0.0005	20.1	1.4	1	23	653	675	653	675	0.97
24	29	0.0013	0.057	13.6	0.9	1	23	681	703	681	703	0.96
25	29	1.6e-06	7.1e-05	22.7	2.6	1	23	709	731	709	731	0.98
26	29	3e-06	0.00013	21.9	0.7	1	23	737	759	737	759	0.98
27	29	0.0001	0.0043	17.1	2.0	1	23	765	787	765	787	0.98
28	29	3.3e-06	0.00014	21.7	2.0	1	23	793	815	793	815	0.98
29	29	0.0083	0.36	11.1	0.3	1	23	821	844	821	844	0.97

Sequence Information

Coding Sequence: ATGCACTTAACGTTGcataaaaagaaacattatGCTAAACCAACGACTTATCATTGTGATATATGTTCGaaacaatttataacaaaagatGGTTTCGTTAGACATCAGCGTCATCATAATAAGGATTTTGAAGCAACTTGTGATATTTGTGGTCGTGATTTTGCACGTACATCTGAATATCGTTGGCATATGACCCGTGTACATGGCAATAACACCTGCAATATTTGTCAGAAGAAATTTTCTGATCTATATGCATTAAAGAATCATATGAAACTGCATGATCGTAACTTCAGATGTGAAGTATGCTCGGAAACATTCTCACAAAGGCGTCATTTAACACTACATACAAAAGAGGTGCATACAAAAGATGTGCATATTAAGGAGCGTCAGAAATAcatttgtgatttttgtgGCAAAGAATTAGCAACTCTTGGAAGTTTGAAAGTTCATCGAAACAGCCATCTAGGCATAAAACCGATTGAATGTGATCAATGTGGAAAGAAGTTCGCTAATAAAGTACAACTAATGATACATATGAAAAAACATACTGGCGAAAAACCATATAGTTGTAACATTTGTGAAAGAGCATTTGCACAACGTTCACATTTAGTAATACATTTGCGAATTCATAGTGATGAGAGACCATTTAAGTGCAATATTTGTGAAGAGAGATTTCGTGCTAAAGATACGATGATCTCACATATGAGAAGGCATACTGGCGAAAGACCATATAGTTGTAACGTTTGtgaaaaaacatttatacaaCGTGGAGAACTAACAAAACATTTACGGGTtcatacaggtgaaaaaccatatgCTTGCGAACATTGTGAAAAAGCATATTTCGAGAAGAGGGGTTTAGTACGTCATTTACATACTCATAccggtgaaaaaccatatagttgcgatatttgtaaaaaatcagTGACATCTAGTGCTAGTTTAAAAGAACATTTACGAATTCACAGCGGCGAAAAACCATACAGTTGTAATATGTGTGAAAAAAAGTTTGCCAAACGTAATTCTTTAGTTGTTCATTTACGAATCCATACTGGCGAGAAACCATACAGCTGTAAAATGTGTGACAAAAAATTCACGCAACACAATTCTTTAGTGATCCATTTACGAATTCATAATGGTGAAAGACCATATAAGTGCGATATTTGTGAAGAAGGATTCGTTAGTAAATACACTCTTGATTGTCatttaaaaacgaaacatCAAAAAATaGATACTCTATCATGGATCAACGAGTCAACTCAATGCCTTGTTTGTTACAAACACTTTAAAACGAAAGAAACATTAAGGAGACATATATTATTTATCCATAGTGAAGATCGGCCACAAGGACCGTTTTATGAATGCGATCTATGTtcgaaacaaattaaaacgaAAGTAGGCTTCATTAGACATCAGCGTCATCATGCGAAAGATTTTGAAGAGATTTGTAGTATTTGTGGTCGTGGTTTTGCATTTACATCTGAATATCATTCGCATATGAATCGTGTACATCGCGATAATACATGCACTATatgtaataaatcatttacTGATAAATATTACTTAATAGATCATATGAAAGTACATGATACGActcataattttaaatgtgagTTGTGTTCGAAAACTTTTGCAAAAATGTGTTCTTTAAAAGCACATACGAGGTCGGTACATAATGACAATCCTGAGAAATTCGTTTGTGATCTGTGTGGCAAAGTATTAACATCTAGTAAAATATTGAAGGATCATCTAAATGTTCATCTAGgcataaaagaaaatgaatgTGATCAATGTGGaaagaaatttgttaatagAAAATCATTGACTGCACATTTGAAATCACATTCTGTAGAACGACCATACAAATGTAATATGTGTGAGAAAGCATATAAGTATCGTGAAGGCTTAGTACTTCATCTACGAACACACGACAAAACCACCGCCTGTGAAAAAACACACAGTTGCCCAATTTGCGACAAGAAATTCCTTAATCCATCCAGCCTCAAAActcatttaaaaatacatactgCAGAAAGGACACATGCTTGTGATGTTTGTGGAAAAGCATTCTTGGCACGTCATAATTTAGTAACACATTTACGGATTCATAGCGGTGAAAAACCGTTTGCTTGCACACATTGCGACCGAGCATTCTCTGATGCTTCTTGTTTAGCAAAACACGTACGTACCCATAgtggtgaaaaaccatatagttgcgatatttgtaaaaaatcgtTGACATCTAATGCTAgtttaaaacaacatttacgAGTTCATACCGGGGAGAAACCGTAtagttgtaaattttgtaagaagaaatttggaaaaagtACTTCTTTAGTTGTTCATTTACGCATCCATACTGGTGAGAAACCGTATAGTTGCAATGTGTgcgataaaaaatttacacaacaTAATTCTTTAGTAATTCATTTACGCATTCACAGTGGTGAAAGACCGTACAAATGCGATGTTTGTGAAGAGGGATTCATCAGCAAATATGCTCGTGATTCTCATCTTAAAGTGAAACATCAAAAGGAGTag
Protein Sequence: MHLTLHKKKHYAKPTTYHCDICSKQFITKDGFVRHQRHHNKDFEATCDICGRDFARTSEYRWHMTRVHGNNTCNICQKKFSDLYALKNHMKLHDRNFRCEVCSETFSQRRHLTLHTKEVHTKDVHIKERQKYICDFCGKELATLGSLKVHRNSHLGIKPIECDQCGKKFANKVQLMIHMKKHTGEKPYSCNICERAFAQRSHLVIHLRIHSDERPFKCNICEERFRAKDTMISHMRRHTGERPYSCNVCEKTFIQRGELTKHLRVHTGEKPYACEHCEKAYFEKRGLVRHLHTHTGEKPYSCDICKKSVTSSASLKEHLRIHSGEKPYSCNMCEKKFAKRNSLVVHLRIHTGEKPYSCKMCDKKFTQHNSLVIHLRIHNGERPYKCDICEEGFVSKYTLDCHLKTKHQKIDTLSWINESTQCLVCYKHFKTKETLRRHILFIHSEDRPQGPFYECDLCSKQIKTKVGFIRHQRHHAKDFEEICSICGRGFAFTSEYHSHMNRVHRDNTCTICNKSFTDKYYLIDHMKVHDTTHNFKCELCSKTFAKMCSLKAHTRSVHNDNPEKFVCDLCGKVLTSSKILKDHLNVHLGIKENECDQCGKKFVNRKSLTAHLKSHSVERPYKCNMCEKAYKYREGLVLHLRTHDKTTACEKTHSCPICDKKFLNPSSLKTHLKIHTAERTHACDVCGKAFLARHNLVTHLRIHSGEKPFACTHCDRAFSDASCLAKHVRTHSGEKPYSCDICKKSLTSNASLKQHLRVHTGEKPYSCKFCKKKFGKSTSLVVHLRIHTGEKPYSCNVCDKKFTQHNSLVIHLRIHSGERPYKCDVCEEGFISKYARDSHLKVKHQKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -