Ipal005639.1
Basic Information
- Insect
- Iselma pallidipennis
- Gene Symbol
- Csrnp2_1
- Assembly
- GCA_037464855.1
- Location
- JAZBHA010000461.1:1-6407[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.22 1.5e+03 -1.5 3.8 57 93 79 117 62 147 0.39 2 4 9.5e-97 6.7e-93 310.2 14.0 1 218 276 518 276 518 0.93 3 4 1.9 1.3e+04 -4.5 1.2 69 73 538 542 519 576 0.37 4 4 0.51 3.6e+03 -2.7 0.2 81 118 726 764 711 767 0.54
Sequence Information
- Coding Sequence
- TTAATCATGTCGGCCACGGAGGCCGTTAGTTTTAAGGATTCCGATGATCAAAAGGACAATCTAATTCTTGTACAACAACACGAAATAGAAAACGATAATATCATAACAACAATGGGGTCAAATGCATCAGCAACAAAAGACGATCTGTTGGAAGAAATCGAGACGAATcctgttgatttattaaattcgaatattgttgaaactgttgaaaattttgttaacaagCCTTTAAGTACAAATAATGAAGACTTGAACGAATCTAATAACAGTGAGCGTAATGATTCTAAATTAACAGATACAGAGTCGCAATCAAATCAAGCAATAgataatggtgatgataataataaagaatctCCAAAATCAGAAACTAATACAACAACTATTGAGAATGCCAACGATGGTGAAGATTCAGCTACAGAAAGTTTACCGCCAACTGAAGAATTAACCGAAGAACCCCATGATCGTTCAGATGGTTCTGATTCTGGCCTAGGTGAAGAACGGCCAGATCctatcacaacaacaacaaatctagGTGAAAGTGATAGTGAAACATCGTTTTTAGATCGTATTGATGAAGCTGCACAAAATTCAGctggaaattttgataattttgatcatagtaataaaatacaagattTCATTTTACCAACAACTAGTTGCAGTCAAGCTAGTAAATCAGAGAATTCTGATGATAAGGAACAAAATCGAATTGATAAAGATATACGTGATATATTGGATGCAGCAGAACCACCAAAACGTGTACcattaaaaagtaatttaaaacgaaaattatcaaatgaaGAAGATGATGGTCCACCGAGATGCAAGAAAAAACGTGGAATATCATTTGATAGTGTTACAGTGTTCTATTTTCCACGAACTCAAGGTTTCACTTGTATCCCATCTCAGGGTGGGTCGACATTAGGAATGGGGgcacaacatacacatatgaGAAAGTTTTCAATTGTCGAACATGCAAACGAACAACGCCGTATCCATCGACAATTGTTGCAGCAATTGCGTTCAGAAAGACATTCAACTAGTGTCAGTGCTGGCAatggcagtggtggtggtggtggcggtggcggtggcaATGGCAGTGGTTGTGGACCAACTGGTGGTAGtagcggtggtggtggtggtggtggtggagggTCGTCAAGTGATGAAAGTGACAGCGAAGAAGAGCCTAGTGATGCTTCTGAATCTGAAATGGatttagataattattatttcttacaACCGGTGCCGATTAGACAACGACGGGCATTATTACGAGCATCAGGTGTTAGAAAAATCGACTCGTACGAGAAAGATGAATGTCGTGATATTAGATCGTCACGGGAATTTTGTGGTTGTGGCTGTAAAGGGTACTGTGATCCGGACAGTTGTTCTTGTAGTCAAGCTGGTATTAAATGCCAAGTGGACCGATTAAACTTCCCATGTGGCTGTTCTAGAGATAATTGTGGCAACTCTAGTGGTAGAATCGAATTTAATCCAGTTAGAGTACGCACACATTTCATTCATACATTGATGCGGCTCGAATTggaaaagaaacaacaagaagaaatgAAAAcggaaaagaaaaacgattcCAGTTGGATGGATAATGAACGTTTGAATGccaattatcaaataaaatcaaataattcacaaTCGAATAAGACTTGTATTcttcataaatataataatagtaatttaaattcacGTACcgatattgttgataattgtgtCCATGATTCTGGtagttttacaaatttacattatGGTGCACCTGGTGAAGGTCCTGGACAAATAACAACCCATCATAATCCAACCACTGCCGGTTTTGCAGATTTACCAGCACGTGAAGACTCTTTAGATCTATATACATTCAGAGAAGATTGGTATGGGGATGAGACGACACGGGACGGTCCCGTTGTTGGTGAAAGGAAACAGCAACATCCCCACCAACCATTTCCACCTCCCGGCCAGGGTTTCCATTTTCCCGACCCTAGGTTTTCCGATGTTGGTTTCCCAGCCGGTGCCTCCCCCTATCCATCCAATCAATACACGCAGCCGTACCACTCCAATTTCGCCGACTTTGCCCCCGTCTTCAATCCCTATAGTGGAGTTTACAATTCGGAATTTGGgtcgacgacgacaacaaaaaCACTTGATGGAACCTTTGCACAAAATACATcaaatactaataattatgaacattttacaaataatgataatagttttaatacaaatcaaattgaaaatgggaaagaaaatcaatatacAAGTTTGAATCCGGTCGGGgccaacaataaaatcgaatcGTTTTCAGAATTATTGAATGGACGTTATAACTATACAGGATATGATGATACGAACAATTTTCCTAGTTTAAATCCAACAGATATACCtactgtaattaataataatggtaataatacaGATAGGGTACCGAAATGCGATTCGAATACGACCAATTGTAATCCAAATAATACAGATGATTGCGACGACAATTTTggggaaattattaaaaaatcaatggtAGAAACAACGTCTGcttaa
- Protein Sequence
- LIMSATEAVSFKDSDDQKDNLILVQQHEIENDNIITTMGSNASATKDDLLEEIETNPVDLLNSNIVETVENFVNKPLSTNNEDLNESNNSERNDSKLTDTESQSNQAIDNGDDNNKESPKSETNTTTIENANDGEDSATESLPPTEELTEEPHDRSDGSDSGLGEERPDPITTTTNLGESDSETSFLDRIDEAAQNSAGNFDNFDHSNKIQDFILPTTSCSQASKSENSDDKEQNRIDKDIRDILDAAEPPKRVPLKSNLKRKLSNEEDDGPPRCKKKRGISFDSVTVFYFPRTQGFTCIPSQGGSTLGMGAQHTHMRKFSIVEHANEQRRIHRQLLQQLRSERHSTSVSAGNGSGGGGGGGGGNGSGCGPTGGSSGGGGGGGGGSSSDESDSEEEPSDASESEMDLDNYYFLQPVPIRQRRALLRASGVRKIDSYEKDECRDIRSSREFCGCGCKGYCDPDSCSCSQAGIKCQVDRLNFPCGCSRDNCGNSSGRIEFNPVRVRTHFIHTLMRLELEKKQQEEMKTEKKNDSSWMDNERLNANYQIKSNNSQSNKTCILHKYNNSNLNSRTDIVDNCVHDSGSFTNLHYGAPGEGPGQITTHHNPTTAGFADLPAREDSLDLYTFREDWYGDETTRDGPVVGERKQQHPHQPFPPPGQGFHFPDPRFSDVGFPAGASPYPSNQYTQPYHSNFADFAPVFNPYSGVYNSEFGSTTTTKTLDGTFAQNTSNTNNYEHFTNNDNSFNTNQIENGKENQYTSLNPVGANNKIESFSELLNGRYNYTGYDDTNNFPSLNPTDIPTVINNNGNNTDRVPKCDSNTTNCNPNNTDDCDDNFGEIIKKSMVETTSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -