Basic Information

Gene Symbol
RERE_1
Assembly
GCA_037464855.1
Location
JAZBHA010000267.1:3940-12293[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.8e-07 9.5e-05 22.1 0.2 2 45 127 171 126 172 0.91

Sequence Information

Coding Sequence
atggcTACAACACAGGGAGAGATTAGGGTGGGTCCTGGTAACCAGGTAAAAGATATTTATgCTCGTTTACCTGAATATCGTCCCGGTGTATCACCAGAATTATTATCACCCGATCCGGAACAGACACGTATACGTGAAGAATTACGTTGGGTACCAGCAATGACATTAGATTCTGATTTATTAATGTATTTAAGGGCAGCCCGATCAATGGCTGCATTTGCTGGTATGTGTGATGGTGGTTGTCCAGAGGATGGTGCTAATGCTGCATCCCGGGATGATACCACTATTAATGCATTGGATGTTcTGCACGATTCTGGCTATGATCCTGGTAAGGCTCTACAAGCTCTCGTTAAATGTCCAGTACCGAAAggtattgataagaaatggAGTGAAGAGGAAACGAAACGATTCGTTAAAGGATTACGAcaatttggtaaaaatttcTTTCGTATACGGAAAGATCTATTACCACATCGAGATACTCCGGAattagttgaattttattatttatggaagAAAACACCGGGTGCAAATAATAATCGTCCACATCGACGTCGTCGTCAAGGTTCATTACGACGTATCCGTAATACAAGAAATAGTcgtggtggtaataataataataataataacacaccAAATACAGGACGTAATGGTAGCAatacagaaattgaaaataataatagtcgaCCATCACCACAACCAGGTGGTGGTAAAGAACCAGGTGAAACTAGTTCAGTAACAGAAGATGATAATTCCGAAGATGATAGTGATAGTAGAGATGCACATTATAGATGTAGTCATTGTTTTACAACAAATTCAAAAGATTGGCAACCTGGTGGTAAAGATCGTCAAATTTTATGTTGGGATTGTCGTGCACATTATAAGAAAACTAATGAATTACCACCATTAACAGCACCAGCAGCAATTAGTGGTACACCACCAATTGAAAGTCCTGATGCTAGTCCACAACGGATGCGTACAAGAAATAAAGCAGCAAAAGAACAAACcaattcaacaacaccaacaacaacaacaaatcgtcAAAGACCGAAACGTGGTGGTACAGAAACACCAGAACCCAAAACACCAGTCAAACAAACAGCTAGTGgaaatacaaataacaataataataataataatagtggggGAGGTAgtggaggaggaggaggaggaggaggaggaggaaataataataataataataatagtaataataatgttactAGTCCACCAGAAAAATCCTCCTCgtcatcatcctcatcatcatcatcatcttcatcgtcgtcaacatcaacatcatcttcaacgacaactacaacaacatcaacaggGAATTCAGGCACACCAGCAAAGAAAAAAGgtggcaataataataataataataataatactagtgGTAGTAAtggtaacaataataataacaataataataataatggtaataatggtggtaaatTGGACAAACCGGaaacaacaccatcatcaaaGAATAATCGTAAACGTGGTCAAGATAAAATCGatgattcaattgatttagATGAAAAAGAATtgggtttatttaaaaagaaacgtGAACGTGCTGATAGTCCATCATCAAGTATAACAACTGATTCAGGTTCAATCAATGATGATGTTGAAACGAATGAAACAGAAAATGATACAAtcatggaaaataataatagtaataataataataataatatagtgacaacaacaacaacagcaacaacaatgacaacaacaacaaatactacCTCTAGtgatgatagtaataaaacaGTACTACCAACAACATGTGTtccaaataaacaacaaacaacaattattaatgatcAACCGATACCattaaatgtttcaatacGTTTACCGGATGATATTAATGAacgtaaaaatttaattaaacgtaATTTAGATAGTTCAGTAATggatttaaaagaaacaacaacatcaacaacaacaacagccctGAAGAAGGAGGTAAATAAGAATGAAACGATCAATAAAAGTATTGATGAGAAAACGTTGATGAAAGAAGAAACTAAAGAGCTACcagataaatttaaaactgaATTAATTATACCAAAAGTTAAAGTAAAAGAAGAATTAGAAACGagtaatgaaatattaaatttaaatgcaaaagatgataataatttatataaagagaGCTTGTTTACACCgcaaaatttgataatgaaaGATTCAATGGTTAGTCATTATGTAgcgcaacaacaacaacaacagcaacaacaaccaccactcAATTTgaaagataataatacaacacaatatttgaataataataaggaacaAGTTAAACAGGAACAACCAAATTATAGCTTTAATATTGctggtggtaataataataataataataaatcatcaacattGGGTCATTCTGTGAATaatgtgataaaaattgaacCACGAGATGAACCCATGGAACTAACTAGCcatcaatcaacaacaagaatccaacaacaacaagacaattATATCCATCAGAATCCACCATTGAATATACCAACGGTAATACCATCAATTCAATCATTAAATCCATCAATTGATGAAAAACTAGAAAGACCAGAACGTTTAGATCGTCCTGAACGAACTGATCTAAtgataccaacaacaacaacaacaacatcaattggTCAACCACCTATACCAAGTTTAATGCAATCAAGTAATTTAGTAacaattggtggtggtggtaataatcaacaacaaccagcaccaccgccaccaccaccaccatcaattgGTCATTATAGTTTTATGTCACCATATAATCATCCACAATCACCGAggaatttagagaaaaatcatcatttacaacaacaacaacaaccacaacagaATGAGCCacagaatttgaaaattaaacaagaattaCCGGATAATAATCAAAGTTTAAGTGGTAGTTTTATTGGatcaataccaccaccaccaccaccgccaccaccatcgACTAGTGACCCATTGCAAAGTTTGAAAGATGTTAAAGTTCCTGGATATATACCATCGTCAatgaatacaacaacaacaacatcgacTGATCGCCCACCATCATCGTCATCGGCAACTGGAGTTGATAATATTAAGAAAGAACCTGAATTTggtttaccaccaccaccgccaccagtGACGTCACAAACTACTACTAATACTACGAGTAGTACATCAAGTCCTGCACAAGATAAATGTCCAACACCGAAGACACCAATTATTTCACAAacgccaccaccgccaccaacatcattatcatcatcaacattatcacTACGACCACCGACAAGTTCGCCACATTcagcaattaatttaattagtcCCAGTTCTGGTCATTCAATAACAAGTTTAGCCCAAACAATGCATCATCCATCACAAACACATGGTTATCCTGGATCATTACATCCATCAGCACATCCATTGATGCATCCAAGTTTTCTACATGCAATGCATCAATTCCATACACATCCATATTCTGGTTATCCATTCAGTTATCCATATCCATATGGtgtaccaccaccgccaccaccaccacaaccacatgctataccaccaccacaacaacaacaacaaccaccaccaacaaaaaCTATTGATACATCAACTgtactatcatcatcaacacaaCATACATCTAGTTCAACAATGACAACAAAACGTGAAATACGTGaaaatgatggtgatggtattGAACGACATCATAGCCATGAAATGACATTAACCCATCATCAATCAACATCACATCATAGTTCAGTACATACAAGTACCGAAAAACCATCAAATTATAATAGTGTTGTtggtataaataataataataataataatagtggtaataatggtggtaataattCTAGTCATTCAATAACATTTTCACATTCAACAAGTACCAGTTCAAGTCAATCAAtacaacataaaattaatcaaaaaactgTACGTACAACAAGTTCACCggctagtagtagtagtagtggaaataataataataataataatttatcaatatcacAAACAACATCAGGAACAACAAGTAATCATCAACATACACATCATCAtacccatcatcatcatgatcgtTTATCACCTGGTGGTAATCAAATGTTAAGATTACATCATCAATCAACAAAAGTACCACAACCCATACAAGTACCACCAACCAATCCACATCATTTAATGATACAGCCACCAAGTTTAGGTGGTAGTCATCATCATTTATcaacacaacaaccaccaccaccaccagttaATTCATTGGAAGCGTTACGAGCACATGCTGCACAAGCTGCAGCTAatatgcaacaacaacaacaacatcaacatcaacaacatcaacatcaattaAGTACATCACCAATGAatccaccacaacaacaacaacaatcgaataaatcaacaacatcgTCAGGTGAtagtgaaataaaaattgaatccGAACCGGAACAGATCCAAGAAGAGGAAGGTCAAACTAGTCCATTAGGACCACCACGTGGACCATCACCAGAACCTCGAATTGAAGATACTGAATGTCATCGTAGTCAATCGGCAATATTTCTACGTCATTGGAATCGTGGTGATTATAATTCATGTACACGTACCGATTTAACATTTAAACCGGTACCGGATTCGAAACTAGCACGTAAACGTGAAGAACGTTTACGTAAACAAGCTGAACGTGAACGTGAAGAACGTGAACGTTTagctcaacaacaacaacagcagcaacaacaacaacaacaacagcaacaacagcaacaacaacaagcacaATTACAAGCACGTAAAATCACAGCAACACCTGATAAACCAACCGATATGAAACCACCTAGTCGTGGTCCATTAGAAACCGTATCATCACCATATGAAGgtcgtagtagtagtaatagtggtTATCCATCTCGACCAAGTGCTAGTGGTGGTTTTAATGATACACCCGCTTTACGACAATTATCTGAATATGCACGTCCACATGCTTTCAGTCCAGGTCATATACAACGATCATTATTAGGACCACCAGGTGCTACACATGTTATGGATCCAATGTTACAATATCAACTAAATAGTTTATATGGACCGGGTGCTAGGGAACGTTTAGAATTAGAACATTTAGAACGTGAGAAACGTGAACGTGAAATGCGTGAAATACGTGAACGTGAATTAAATGAACGTTTAAAAGAGGAAATTATGAAAAGTGGTATACGTGGTGGACCACCACCAAATCCAATGGATCCACATTGGATTGAAATACAAAGACGGTATGCGGCAGCCGGTTTAACAGGACCTGGAGgACCAGCTGGAATACCTCTACATCATTTTGCCTTATATCCCGGTGCTGGTGCTGGTGCTCAACTAGAACGTGAACGTTTAGAACGATTAggtataccaccaccaccaggtCCACAAGGACCACCGGGTGCCCCACCAGGTCATCCACATCATCCAGCTGCTGCAGCTGCTGCACATGCTGCACAATTGGAAGCTGTCGAACGATTAGCTCTAGCTACCGATCCAATGgtACGTTTACAAATGGCGGGAATCTCTCCAGAATATCATGCACATACTCATGCTCATACACATGCACATACACATCTACATCTacatccacaacaacaacaggcaCAACAGGAGGCTGCAGCGGCAGCTGCAGGTTTTCCATTACCAGCTTCTGGTGCTCCAGGTTATCCAAGACCTGGATTAATACCGGGACGTGATGGCCCATTAGGTTTACATCATCCTGATCTGTTAGGGCGACCTTATGCTGATCAATTAGCCCATCAagCTGCAGCTCATGAACAATTACAAAGACAGATGTTATTAGAACGTGATCGATTTCCACCACATCCATCGATTGTTGCCCAACATGAGGAATATTTACgGCAACAACGCGAGAGGGAATTGAAAGTGAGAGCATTAGAGGAGGCGGCACGTGGTTCACGCCAATAA
Protein Sequence
MATTQGEIRVGPGNQVKDIYARLPEYRPGVSPELLSPDPEQTRIREELRWVPAMTLDSDLLMYLRAARSMAAFAGMCDGGCPEDGANAASRDDTTINALDVLHDSGYDPGKALQALVKCPVPKGIDKKWSEEETKRFVKGLRQFGKNFFRIRKDLLPHRDTPELVEFYYLWKKTPGANNNRPHRRRRQGSLRRIRNTRNSRGGNNNNNNNTPNTGRNGSNTEIENNNSRPSPQPGGGKEPGETSSVTEDDNSEDDSDSRDAHYRCSHCFTTNSKDWQPGGKDRQILCWDCRAHYKKTNELPPLTAPAAISGTPPIESPDASPQRMRTRNKAAKEQTNSTTPTTTTNRQRPKRGGTETPEPKTPVKQTASGNTNNNNNNNNSGGGSGGGGGGGGGGNNNNNNNSNNNVTSPPEKSSSSSSSSSSSSSSSSTSTSSSTTTTTTSTGNSGTPAKKKGGNNNNNNNNTSGSNGNNNNNNNNNNGNNGGKLDKPETTPSSKNNRKRGQDKIDDSIDLDEKELGLFKKKRERADSPSSSITTDSGSINDDVETNETENDTIMENNNSNNNNNNIVTTTTTATTMTTTTNTTSSDDSNKTVLPTTCVPNKQQTTIINDQPIPLNVSIRLPDDINERKNLIKRNLDSSVMDLKETTTSTTTTALKKEVNKNETINKSIDEKTLMKEETKELPDKFKTELIIPKVKVKEELETSNEILNLNAKDDNNLYKESLFTPQNLIMKDSMVSHYVAQQQQQQQQQPPLNLKDNNTTQYLNNNKEQVKQEQPNYSFNIAGGNNNNNNKSSTLGHSVNNVIKIEPRDEPMELTSHQSTTRIQQQQDNYIHQNPPLNIPTVIPSIQSLNPSIDEKLERPERLDRPERTDLMIPTTTTTTSIGQPPIPSLMQSSNLVTIGGGGNNQQQPAPPPPPPPSIGHYSFMSPYNHPQSPRNLEKNHHLQQQQQPQQNEPQNLKIKQELPDNNQSLSGSFIGSIPPPPPPPPPSTSDPLQSLKDVKVPGYIPSSMNTTTTTSTDRPPSSSSATGVDNIKKEPEFGLPPPPPPVTSQTTTNTTSSTSSPAQDKCPTPKTPIISQTPPPPPTSLSSSTLSLRPPTSSPHSAINLISPSSGHSITSLAQTMHHPSQTHGYPGSLHPSAHPLMHPSFLHAMHQFHTHPYSGYPFSYPYPYGVPPPPPPPQPHAIPPPQQQQQPPPTKTIDTSTVLSSSTQHTSSSTMTTKREIRENDGDGIERHHSHEMTLTHHQSTSHHSSVHTSTEKPSNYNSVVGINNNNNNNSGNNGGNNSSHSITFSHSTSTSSSQSIQHKINQKTVRTTSSPASSSSSGNNNNNNNLSISQTTSGTTSNHQHTHHHTHHHHDRLSPGGNQMLRLHHQSTKVPQPIQVPPTNPHHLMIQPPSLGGSHHHLSTQQPPPPPVNSLEALRAHAAQAAANMQQQQQHQHQQHQHQLSTSPMNPPQQQQQSNKSTTSSGDSEIKIESEPEQIQEEEGQTSPLGPPRGPSPEPRIEDTECHRSQSAIFLRHWNRGDYNSCTRTDLTFKPVPDSKLARKREERLRKQAEREREERERLAQQQQQQQQQQQQQQQQQQQQAQLQARKITATPDKPTDMKPPSRGPLETVSSPYEGRSSSNSGYPSRPSASGGFNDTPALRQLSEYARPHAFSPGHIQRSLLGPPGATHVMDPMLQYQLNSLYGPGARERLELEHLEREKREREMREIRERELNERLKEEIMKSGIRGGPPPNPMDPHWIEIQRRYAAAGLTGPGGPAGIPLHHFALYPGAGAGAQLERERLERLGIPPPPGPQGPPGAPPGHPHHPAAAAAAHAAQLEAVERLALATDPMVRLQMAGISPEYHAHTHAHTHAHTHLHLHPQQQQAQQEAAAAAAGFPLPASGAPGYPRPGLIPGRDGPLGLHHPDLLGRPYADQLAHQAAAHEQLQRQMLLERDRFPPHPSIVAQHEEYLRQQRERELKVRALEEAARGSRQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00842320;
90% Identity
iTF_00842320;
80% Identity
iTF_00842320;