Ipal002227.1
Basic Information
- Insect
- Iselma pallidipennis
- Gene Symbol
- RCOR3
- Assembly
- GCA_037464855.1
- Location
- JAZBHA010000115.1:106052-110258[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.2e-09 1.7e-06 27.7 0.0 3 46 130 173 128 173 0.97 2 3 3.4 1.8e+03 -1.2 0.8 36 44 272 280 272 281 0.88 3 3 4.2e-14 2.2e-11 43.4 0.0 3 46 379 422 378 422 0.98
Sequence Information
- Coding Sequence
- atggTATTAGCGGAGAAAAATAGTGAAAATGCGCGAAATGGTCGAAGGAGTCGTGGTCCAAGTCCGAATGGTCATGTCCAGGATTCAACAAGCGAAGATGAAAGCTCAGTGCCAGTTGATAAGATTCGTGTTGGGCGTGATTACCAAGCTGTTTGCCCTGAATTGCAACCGGAAGCCCAACGTAAACCAGAACTATTGGCCGATAGGGCCCTATTGGTCTGGTCACCGACTGAATCAATTCCAGAATCAAAACTGGAAGACTACATAGTCCTGGCCAAAGACAAGTACGGTTATAATGGTGAACAAGCTCTCGGTATGTTATTCTGGCATAAACACGATTTAGATAGGGCCGTATTGGATTTAGCTAATTTCACACCATTCCCTGATGAATGGTCTGTAGAAGATAAAGTGTTATTTGAACAAGCATTTCAATTTCATGGTAAAAGTTTCCATAGAATTAGACAAATGTTGCCTGATAAAAGTATAGCTAGTTTagtgaaatattattatagttggAAAAAGACAAGATCTAGAACAAGTTTAATGGATAAACAAGctagaaaattgaatacaCCGAAAGAggagggtggtggtggtgcttcAGAAGCCGGTTCTGAAGGTGGTTCCAATGAAGATTCTGATCATGATGAGAAGAAGTGGACAATACATCGTGGCATTCGACGTAAAAGCGGTTCACCAAGTCGTACGGGTCAGCCCTCCGACGACAATGCTACCCAGGGTGAGGGTGGCGCGTGCTCTAACTGCGGAGTCGTCTGTACCGTCACACATGTGACATCCAAAGGAGCCCTATGTAATTCCTGCTATCAACATTGGAGACGAACGGGATCATTGCGGCCCACATCGGGGCCAACAGGTGGTAAGCGTGGTTCACCACTTGGTGGACGGCACAAACGCAAACCGCCTCGCGGCATGTACATCAACCATGATGATTTGGCTGCGATGGCATCAGGTACTGCCGGTGTTCTCATGCTAAAAGCAATGGATAGAGAATTAGATTCCCTACAGAGACAAATTCAACAGAATAAACAGAATATAAGCTCATTAAAACGTAAACATTCAGATTCAATAGAAGATCTCCGTCCAAATAACGATAATTCATCACGTATAAATGCACGTTGGACaaatgaagaattattattagctgTACAAGGTGTACGTAAATATGGTAAAGATTTTAAAAGTATTGCAGAAGTATTAGGTAATAAAACTGAACATCATGTACGTacatttttcgttaattatcgTAAACGTTATAATTTGGATAATGTATTGAAAGATTGGGAAAAAGATAATGGACCATTACCATctagtgatgataataattcatcatcagatgttgtgaaaattgaaatggacgattcaaataatactgataatgatgttatatgtatatcaCCGACACTACCAATTACTAAAAAAGATATGAAAAATGGTAAAGTTGCACAAATTAGTAAATGA
- Protein Sequence
- MVLAEKNSENARNGRRSRGPSPNGHVQDSTSEDESSVPVDKIRVGRDYQAVCPELQPEAQRKPELLADRALLVWSPTESIPESKLEDYIVLAKDKYGYNGEQALGMLFWHKHDLDRAVLDLANFTPFPDEWSVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRSRTSLMDKQARKLNTPKEEGGGGASEAGSEGGSNEDSDHDEKKWTIHRGIRRKSGSPSRTGQPSDDNATQGEGGACSNCGVVCTVTHVTSKGALCNSCYQHWRRTGSLRPTSGPTGGKRGSPLGGRHKRKPPRGMYINHDDLAAMASGTAGVLMLKAMDRELDSLQRQIQQNKQNISSLKRKHSDSIEDLRPNNDNSSRINARWTNEELLLAVQGVRKYGKDFKSIAEVLGNKTEHHVRTFFVNYRKRYNLDNVLKDWEKDNGPLPSSDDNNSSSDVVKIEMDDSNNTDNDVICISPTLPITKKDMKNGKVAQISK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01566170;
- 90% Identity
- iTF_01366259;
- 80% Identity
- -