Basic Information

Gene Symbol
Tfcp2l1_1
Assembly
GCA_037464855.1
Location
JAZBHA010000150.1:90904-95549[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.48 1.7e+03 -2.3 0.7 106 132 69 79 18 114 0.60
2 3 0.19 6.9e+02 -1.0 0.6 91 133 168 209 148 220 0.63
3 3 1.3e-67 4.4e-64 215.5 0.5 12 221 267 473 256 475 0.90

Sequence Information

Coding Sequence
atggattatcaattatatgaaaattcgaatgttttattgaatgataatccgaataattcgaaaatttcgTGGAATTTAACAAATGAAACTAGTATGGATGATAATAGTGACGAGTATTTCAGTTGGaatacattgaaaattgatgaaaatcaattagaaaatcatgatgatattaatacaacaacaacaacaacaaagaatcaagaacaacaccagcaacaacGTAAACGAAAAATACCCAATGAAcatgttaataaaatcaaatttcaaaaaatccaacaatcaATTGGACGGGATGAAAAACGGACGAAAAAGGAGTCAACAAATCAGAACGgtAATATCAGAATGGCGTCATCATGGCAAATTTGGCAAACAATTCCTACAATGTTGGATTCAATCTTATCGATTTCTGGTTTAACTGTTTTCAAACAAGAAGCTCCATCACCTACATCAACAGATGTtggtaatttacaacaaatcaatcgTCGAAATCATCGTCAAAGTCCAACATCGACAAGTACTGTTttgcaccaacaacaacaacaacaccaacaccagcAACAGCAACCGTTACAAACcaataatggaaatttggatgataatacaaataatcagacaatgataaataatacaataaatcaattattgacaCATAGTGCttatacaaatttacaaaatgcATTAGATGCAAATTTAGTAACATCACCATCAACAGgagcaataacaacaacaccaccaattaCAGCAgccgcaacaacaacaaccacaataacaacgacaaatcatgataataattacaataataataataatgtaacatCAACGAATTATACATTTACAGAAGATTGTCGTTTCCAGTATGTCCTGGCAGCTGCAACAAGTATTGCAACGAAAATCAATGAAGATACATTAACATATTTGAATCAAGGACAAAGTTATgagattaaattgaaaaaattaggGGATTTATCGATGTATCGTGGAAAACTATTAAAgtcaGTTATACGGATTTGTTTTCATGAACGTCGTTTACAATATATGGAAAAAGAACAAATGATCTCGTGGCAACGTGCACGTCCTGGTGATCGAATTTTAGAAGTAGATGTGCCTTTATCGTATGGTGCTTTTGATATTGTCCAACCACAAAATGccttaaatattatacattttaattGGGATCCAACTAAAGAAGTTGGGATTTATATTAAAGTAAATTGTATAAGTACGGAGTTTACACCGAAGAAGCATGGTGGTGAAAAAGGCGTACCATTTCGTATACAAGTTGAAACTTATCAAAATGGTGAAAATTTAGATTCATCAGTACGTTTACATGCTGCTGCCTGTCAaattaaagtatttaaattaaaaggtGCTGATCGTAAACATAAACAGGATCgtgaaaaaattatgaaacgTCCATTATctgaacaagaaaaataccAACCAAGCTATGAATGTACTGTATTGAATGATGtaagtatttataaaaattcaaaataa
Protein Sequence
MDYQLYENSNVLLNDNPNNSKISWNLTNETSMDDNSDEYFSWNTLKIDENQLENHDDINTTTTTTKNQEQHQQQRKRKIPNEHVNKIKFQKIQQSIGRDEKRTKKESTNQNGNIRMASSWQIWQTIPTMLDSILSISGLTVFKQEAPSPTSTDVGNLQQINRRNHRQSPTSTSTVLHQQQQQHQHQQQQPLQTNNGNLDDNTNNQTMINNTINQLLTHSAYTNLQNALDANLVTSPSTGAITTTPPITAAATTTTTITTTNHDNNYNNNNNVTSTNYTFTEDCRFQYVLAAATSIATKINEDTLTYLNQGQSYEIKLKKLGDLSMYRGKLLKSVIRICFHERRLQYMEKEQMISWQRARPGDRILEVDVPLSYGAFDIVQPQNALNIIHFNWDPTKEVGIYIKVNCISTEFTPKKHGGEKGVPFRIQVETYQNGENLDSSVRLHAAACQIKVFKLKGADRKHKQDREKIMKRPLSEQEKYQPSYECTVLNDVSIYKNSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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