Basic Information

Insect: Ischnus inquisitorius
Gene Symbol: -
Assembly: GCA_963924025.1
Location: OZ001244.1:17432233-17435134[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0029 0.24 12.2 0.2 2 23 330 351 329 351 0.97

2 9 0.017 1.4 9.8 0.3 1 23 357 380 357 380 0.88

3 9 0.00022 0.018 15.7 0.9 1 23 469 491 469 491 0.98

4 9 9.6e-05 0.008 16.8 1.3 1 23 497 519 497 519 0.96

5 9 4.3e-06 0.00036 21.1 1.9 1 20 525 544 525 547 0.93

6 9 0.00036 0.03 15.0 3.8 1 23 553 575 553 575 0.98

7 9 0.00051 0.042 14.6 4.2 1 23 581 603 581 603 0.99

8 9 4e-07 3.4e-05 24.3 0.7 1 23 609 631 609 631 0.98

9 9 0.0046 0.39 11.5 2.0 1 23 646 669 646 669 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0029	0.24	12.2	0.2	2	23	330	351	329	351	0.97
2	9	0.017	1.4	9.8	0.3	1	23	357	380	357	380	0.88
3	9	0.00022	0.018	15.7	0.9	1	23	469	491	469	491	0.98
4	9	9.6e-05	0.008	16.8	1.3	1	23	497	519	497	519	0.96
5	9	4.3e-06	0.00036	21.1	1.9	1	20	525	544	525	547	0.93
6	9	0.00036	0.03	15.0	3.8	1	23	553	575	553	575	0.98
7	9	0.00051	0.042	14.6	4.2	1	23	581	603	581	603	0.99
8	9	4e-07	3.4e-05	24.3	0.7	1	23	609	631	609	631	0.98
9	9	0.0046	0.39	11.5	2.0	1	23	646	669	646	669	0.95

Sequence Information

Coding Sequence: ATGCAGAGGACTCTgaacgtcgagagagagatctCCGTTTCGCAGGAGACGGAGTCGTTCTGCTTGGTGTGCAAGACAAATTTGAATTCGGCCTTGAGCACGAATATCTTCTACGCCTCTCTTCCGAGATACGGAGAATTATTGGCCAGCTTCGTTCTCAGAGTTTTGCGTCCCGTCGCTTCGGATCTTCGCAGTTCTTACATCTGCGTCGCTTGTCATGATCTCTTTCGCGCACTGGAACAGGCGCAGTGGACCGTGTCGAATGTAAGAAGCGAGATTCTCAAGATTTATCATTCCAGAGAGACGAGCGCGGCTCAACAGCGCAAAATCAAAATTTCGTCCGATCGAGCGTCGTCGCGAAACTATACATTTAATGAATCGTCGGAGGATGAAAAGAATCGTTTGATAGATATTGCTGAATTTAGGAGTCTCGACGCAGCAAGAAACGAATTCGAAACTTTTCCCATTGACAATTTGGAGTTGACGAGCGAATTGAGCGTCAAAAGGGATATCGAAGATTCTCTTGCAATTACGAAGCCCGAAGAGTACAAATTGAACGATCTCGCGGGCGAGTCGCACGCGGAAAAATGTCCGATAACGAGAAACGGAACGATGaattgcgagaaaatcgattcgcgACTCGCGCCCGAAGTTCCGGGCGAAACAACCGAGATCGCGAGTCGCGAAAATCGCGTCGAGGTTGTCCCCGAAGttccgaacgaattttcgaagaacGTGACTCGCGCGGAGTCCGACAATGGTCCTGCGATAATACCCGAGATTTCCAACGAATTGTTGAAAGATTCGTCGCGCGAAGAGAGCAAAAATGCGCGCGAGATAATATCTCAGATATCCCaagaattgcagaaaaattCGGCGCCgagaagcgacgagagcgcgaacgCTCGCGAGATGATAAACGAGATATCGAGtacgttgatgaaaaatttggACGCGGAAGTCGCGAAAAAGTCGCTGTACACGCTGCAGTGCGGTGTGTGCAGTCGTCTGTTCGGATCGTCGAAAGATTTGCAGTCTCACGCGCTGACGCACGCTGAAACGCGGCCGTATCGTTGTCGCGAGTGCGGCGAGAGATTCGCCGAGTACTCGAGTGCCAACGATCACGCTTCGGAGTTTCATTCCTCGGTGAAAAATTGCATATCCGTGTCGGGCGCACCGTCGGCGAGCGAGATTGCGAATTCTTCGAACGGGAATTGGATATTTTCGGAAGATCGTCGAGTCGGCGAGATCAAAGACTCGGCGGAGGTCGCGGAATTCGGGcgaggcgcgatcgacgattcgagcGATCGCGACGCGGCGCTCGAAACGAATAGCGAGAAGAAGGTCGAGAGACCCTCCTGGAAATCCGGACGAATATCGAAGTACAGTCTGAAACCGTTGAAATACTCGTGCTCGACGTGCGGAAAGAAATGGCGAACCTCGGCCGAGCTCAAAACGCACGTGAAGTCGCACTCCAATTTGAGGCCTTACATGTGCGAGAAATGCGGACAAGCTTACAAGCACAAACACGCCCTTGAAATTCACGTGGGAATGCACAACGGCGTGAGCCCGTTTCAGTGCAGCGTTTGCAACAAGTGTTTCACACAAAAGGGCGCGCTAATGAGACACCTGCCCATGCACACCGGCGAAACGCCTTATCAGTGCGAATTGTGCGGCAAACGATTCGTTCACCACACTTCGTACAATATGCACGCTCTTTCGCATACGGGGAAGAAATCGTTTCGATGCCATGTGTGTGACTTGTCGCTGTTGTCAACATCTCATTTGAAACGCCACATGCGAGTTCACACGGGTGAGAAGCCGTATAGTTGCACGCTGTGCGGCAAAAGCTTCGCCGAAAGATACAATTTGTTCGCCCATCAGAAGATTCACGATCCCGTTGAGATAATGGCGAAAGCGGCGAAGAAAATGACTTACAAATGCGAGCGGtgcgacgaatatttcgacaaGAAGCAAAAATTGGAGGAGCACACGAAGGATCGTCACAACAACAGCACCAGCTCCAACGACAATCCGACGAACGGAAGAAAGTGGATCGGTCACACGATCGAGGTGGAAAATCCGCCATGCGAAAACGGCAGTCTAATTGAACAATCGTGGCAGGATCTCGATTACGCGAAGCTGCAGAGCGTCGCGATGAAAGCAGCACAAAACGAAAGTCAACTATCGCAATTGTCGCACGAATCCATAGCGATGCTGATGTCGCAAACGAATTACAATAAGGGAATGTCCGTTGTTATacaatcgacgaattcgactATCAACGCGGAAATCGATCAGACACAAATCTGA
Protein Sequence: MQRTLNVEREISVSQETESFCLVCKTNLNSALSTNIFYASLPRYGELLASFVLRVLRPVASDLRSSYICVACHDLFRALEQAQWTVSNVRSEILKIYHSRETSAAQQRKIKISSDRASSRNYTFNESSEDEKNRLIDIAEFRSLDAARNEFETFPIDNLELTSELSVKRDIEDSLAITKPEEYKLNDLAGESHAEKCPITRNGTMNCEKIDSRLAPEVPGETTEIASRENRVEVVPEVPNEFSKNVTRAESDNGPAIIPEISNELLKDSSREESKNAREIISQISQELQKNSAPRSDESANAREMINEISSTLMKNLDAEVAKKSLYTLQCGVCSRLFGSSKDLQSHALTHAETRPYRCRECGERFAEYSSANDHASEFHSSVKNCISVSGAPSASEIANSSNGNWIFSEDRRVGEIKDSAEVAEFGRGAIDDSSDRDAALETNSEKKVERPSWKSGRISKYSLKPLKYSCSTCGKKWRTSAELKTHVKSHSNLRPYMCEKCGQAYKHKHALEIHVGMHNGVSPFQCSVCNKCFTQKGALMRHLPMHTGETPYQCELCGKRFVHHTSYNMHALSHTGKKSFRCHVCDLSLLSTSHLKRHMRVHTGEKPYSCTLCGKSFAERYNLFAHQKIHDPVEIMAKAAKKMTYKCERCDEYFDKKQKLEEHTKDRHNNSTSSNDNPTNGRKWIGHTIEVENPPCENGSLIEQSWQDLDYAKLQSVAMKAAQNESQLSQLSHESIAMLMSQTNYNKGMSVVIQSTNSTINAEIDQTQI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -