Basic Information

Insect: Ischnus inquisitorius
Gene Symbol: -
Assembly: GCA_963924025.1
Location: OZ001249.1:2932864-2934147[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 2.5e-05 0.0021 18.7 0.1 2 23 184 205 183 205 0.96

2 6 6.8e-06 0.00057 20.4 3.5 1 23 211 233 211 233 0.98

3 6 2e-06 0.00017 22.1 2.7 1 23 239 261 239 261 0.99

4 6 0.00075 0.062 14.0 0.3 1 20 267 286 267 289 0.93

5 6 5.6e-06 0.00047 20.7 0.7 2 23 296 317 295 317 0.97

6 6 1e-07 8.5e-06 26.2 0.5 1 23 323 346 323 346 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	2.5e-05	0.0021	18.7	0.1	2	23	184	205	183	205	0.96
2	6	6.8e-06	0.00057	20.4	3.5	1	23	211	233	211	233	0.98
3	6	2e-06	0.00017	22.1	2.7	1	23	239	261	239	261	0.99
4	6	0.00075	0.062	14.0	0.3	1	20	267	286	267	289	0.93
5	6	5.6e-06	0.00047	20.7	0.7	2	23	296	317	295	317	0.97
6	6	1e-07	8.5e-06	26.2	0.5	1	23	323	346	323	346	0.98

Sequence Information

Coding Sequence: ATGCAGGTGGATTGGTACGCAGGATATGAGCAGTTTGTCAAGCGCAACCTGACTCTGCTCCCACCCCAACAGCCGTCGCAGCACCAGCATCACcagccgcagccgcagcagccgccgcagccgcagcagcagcagcagcagctcgCTCATCCGCAGCAAACGTCCGACATAATGACGTCGATGTTCGAGCAGCAAATAAAGAGCGAGCCGATGGGTTTCTACTCGGTGGCGTCGAGTCGATCGGACGGCTCCAATTCGATGGTGAACCTGTCGGACGACAGGGAGGATCTGTCGCAGCAGGAGGGTCACATGCAGACGCAGCAGCAGAGCAtgcagcatcagcagcagacgcagcagcagcagcagcagcagcaacagcagcagcagcaacagcagcagcagcagcagcaacaacaacagcagcaaccgcatcagcagcagcagccgcagAACCCGCAGTCGCAGCAAAACCAGCAGGGCCAGTCGACGCCGACCCGTCAATCGACCGGCCAGCAAACCGTCAAGGAGGGCAACCGCTCCAAGCCGCAGCCCTGCAAGGTCTGCGGCAAAGTGCTCTCCTCCGCGTCGTCTTACTACGTTCACATGAAGCTGCACTCGGGCAACAAGCCCTACCACTGCACGGTCTGCGAGGCGAGCTTCTGTCGCAAGCCCTACCTCGAAGTGCACATGAGAACTCACACGGGCGAGCGGCCGTTTCAGTGCGAATTGTGCCTAAAGCGTTTCACCCAGAAGAGCAGCCTGAACACGCACAAGCGCGTGCACACCGGCGAGAGGCCGTACGCGTGCGACATATGCCAGAAGCGCTTCGCCGTAAAGAGTTACGTTACCGCGCATCGCTGGTCGCACGTCGCCGAGAAGCCGCTCGTCTGCGACAGATGCTCGCTCACCTTCACGTCGAAGAGCCAATTCGCCATCCACATTCGCACCCACACGGCGAGCACGACCTACGAGTGCAACATATGCGGTCGCACCTTCGTGCGCGACAGTTATCTGATAAGACACCAGAACCGCGTGCATCGCGACATGAATCAGAGCAGCGCGAACCACAATCCACCGACGCCGCAGAGCACCGGCGGCGGCGCCACCCCCGGCGCCGGCTTCGAGAGTCCCGTGTGCGATCTGCGCTACAACGAGGGACCCTCCTCGCTGGACTCGCTCGGCGGCGGCAAGGGCGGCAACATCGCCGCCGAGATCGCCAGTTTAGCCAAGCAAAACAGTCTACAGCTTCCTCTTCCGCTGCTCCATCCGCAGACAACCAACTAG
Protein Sequence: MQVDWYAGYEQFVKRNLTLLPPQQPSQHQHHQPQPQQPPQPQQQQQQLAHPQQTSDIMTSMFEQQIKSEPMGFYSVASSRSDGSNSMVNLSDDREDLSQQEGHMQTQQQSMQHQQQTQQQQQQQQQQQQQQQQQQQQQQQQQPHQQQQPQNPQSQQNQQGQSTPTRQSTGQQTVKEGNRSKPQPCKVCGKVLSSASSYYVHMKLHSGNKPYHCTVCEASFCRKPYLEVHMRTHTGERPFQCELCLKRFTQKSSLNTHKRVHTGERPYACDICQKRFAVKSYVTAHRWSHVAEKPLVCDRCSLTFTSKSQFAIHIRTHTASTTYECNICGRTFVRDSYLIRHQNRVHRDMNQSSANHNPPTPQSTGGGATPGAGFESPVCDLRYNEGPSSLDSLGGGKGGNIAAEIASLAKQNSLQLPLPLLHPQTTN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00756888;
90% Identity: iTF_00653080;
80% Identity: -