Basic Information

Insect: Ischnus inquisitorius
Gene Symbol: -
Assembly: GCA_963924025.1
Location: OZ001255.1:425273-435515[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.15 13 6.7 4.5 1 23 409 431 409 431 0.98

2 18 0.0002 0.017 15.8 0.8 2 19 467 484 466 488 0.90

3 18 0.00029 0.024 15.3 4.5 1 23 494 516 494 516 0.98

4 18 0.0014 0.11 13.2 0.1 3 23 524 545 522 545 0.92

5 18 1.2 96 4.0 1.2 1 23 552 575 552 575 0.97

6 18 1.8e-05 0.0015 19.1 0.8 1 23 579 601 579 601 0.97

7 18 0.0025 0.2 12.4 0.5 1 23 607 629 607 629 0.98

8 18 7.6e-05 0.0063 17.2 2.0 1 23 635 657 635 657 0.96

9 18 0.003 0.25 12.1 0.1 1 17 662 678 662 679 0.90

10 18 1.5 1.2e+02 3.7 1.5 1 23 1203 1226 1203 1226 0.97

11 18 6.8e-05 0.0057 17.3 0.2 1 23 1232 1254 1232 1254 0.98

12 18 0.091 7.6 7.5 2.7 1 23 1260 1282 1260 1282 0.98

13 18 5.6e-05 0.0046 17.6 1.0 2 23 1289 1310 1288 1310 0.96

14 18 0.87 72 4.4 1.8 3 23 1319 1340 1318 1340 0.92

15 18 7e-05 0.0058 17.3 2.7 1 23 1344 1366 1344 1366 0.98

16 18 0.084 7 7.6 2.8 1 23 1371 1393 1371 1393 0.98

17 18 1.2e-07 1e-05 25.9 0.5 1 23 1399 1421 1399 1421 0.98

18 18 0.00065 0.054 14.2 1.6 1 21 1426 1446 1426 1447 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.15	13	6.7	4.5	1	23	409	431	409	431	0.98
2	18	0.0002	0.017	15.8	0.8	2	19	467	484	466	488	0.90
3	18	0.00029	0.024	15.3	4.5	1	23	494	516	494	516	0.98
4	18	0.0014	0.11	13.2	0.1	3	23	524	545	522	545	0.92
5	18	1.2	96	4.0	1.2	1	23	552	575	552	575	0.97
6	18	1.8e-05	0.0015	19.1	0.8	1	23	579	601	579	601	0.97
7	18	0.0025	0.2	12.4	0.5	1	23	607	629	607	629	0.98
8	18	7.6e-05	0.0063	17.2	2.0	1	23	635	657	635	657	0.96
9	18	0.003	0.25	12.1	0.1	1	17	662	678	662	679	0.90
10	18	1.5	1.2e+02	3.7	1.5	1	23	1203	1226	1203	1226	0.97
11	18	6.8e-05	0.0057	17.3	0.2	1	23	1232	1254	1232	1254	0.98
12	18	0.091	7.6	7.5	2.7	1	23	1260	1282	1260	1282	0.98
13	18	5.6e-05	0.0046	17.6	1.0	2	23	1289	1310	1288	1310	0.96
14	18	0.87	72	4.4	1.8	3	23	1319	1340	1318	1340	0.92
15	18	7e-05	0.0058	17.3	2.7	1	23	1344	1366	1344	1366	0.98
16	18	0.084	7	7.6	2.8	1	23	1371	1393	1371	1393	0.98
17	18	1.2e-07	1e-05	25.9	0.5	1	23	1399	1421	1399	1421	0.98
18	18	0.00065	0.054	14.2	1.6	1	21	1426	1446	1426	1447	0.94

Sequence Information

Coding Sequence: ATGGAAATGAAACTCGAGGAGACGCAAGTTTGCAGGCTGTGCGGACAATGCGAGAGTATATTTATCGATGTTTTCGGCGAGGAAGGCACGAAACGCTTGCTCGGACTCAAAATTCACACGAAAGTCAACATTGTGATAGATGAGGAGGACCCTCTGCCGAAGGCGATCTGTGTACAGTGCCTCGGCAAGCTCGAATTCGTTTGCGACTTTCAAGAGGAGTGTCTACGCACCCAACAAGAGTTGCGCGATCGTTACAATCTTCCGCCGTTGTCAGACTCTGAAGAGATAAAGATCGAGGATCCGCCGATCGCGCCGCCCTCGACATCGACGAACAACAACAGTACCGACAAAAACTTAAATCCGCCTCTCACGACCGCCAGCAATGCTTCCCCGGAGAGAGTCTTCGCCGAGCGATGCCCCGAAGTGGCCGAAATCAGCGTCTCGACCTACGAGAAGCCCGAGTCCGAGAACACGACGCCAAAGCCCCGTCGAAAGCTCCGCAGTCTTCGTAGATCGCGTTCCCGCAGCAACGAGAATCCTCCGAATCCGCCGAAGGCTCCGAACGCCCGCGACCAAACGACGACAAAGCGTTGGCTCCGCAGTCGCAACTCCATAGTTCCGCCGAGCGCcgagaaaatcgccgaaaaTGCCTCGATATCTCGCAGACTCCGAAGCCACAGCGATTCCCcggagaagaaggaaaacaCCGAAATTCCGCCGGAGAAATCGCCGAAACGCGCGGAAAAGCTTCCGGAGGACTCGAGCATGATCCAGATTCCGACTTCGGCCTTGAACAAAGTCCTGACCGTAGTGTCTTCCTCGCCGGACATGGAAGTCTCGGTGAAGGAGTCGACGAATCGCACCGGCGACATCGAGGACATAAGTTTCACTCTCGAGCTGCGCCGCAAGAAGGACGAGAGCGAGTTCCTCACGGTTCTGGCGAAGGTCTTCCCGGACCAGGGTTCGTGTCTCGTCGGCTCGAAGATCGTCGATCTCCTGAAGAACGAGAGCAACGTCGAGATCGACAAGATCGTGTCGACGATAATGAACGGAAACAATCGCAAGGCGACGAGTCCGAACGGCATAACGAAgatcgacgagctcgaggagATGGAGAAGCGCTTGTCGGCGACTCTCAATCCGGAGGAATTGTTTCGCATCGACGGCGAGGAGATTCGCGTCGACGACAACGTCGAGCAGGTCGTCGCCGACAATCAGACGAACTATACGTGCAAATTGTGCCGGAAGATTTACGAGCGCCGCGACAAGTGCACGGTGCACGTGAAGACGCACCTCGGAATAAAGCAGTACGCGTGCACGTTGTGCTGCGCGAAATTCGTCTGCAAGTCGGACGTGATGAAGCACATAAGATGCTCGCACACGAACCCGAGGCCGATGCAGTGTCCGAAGTGCCCGAAGAGATTCCGATCGAAATTCGACCTGACGGAACACGACAACGTCCATAAGGGCATCAAGCCGTATCGCTGCACCGATTGCGGACAGAGCTATCATCACAAAGTCTCGCTGCAGATGCACGTCAAGTCGCATTTGCCGCCCCAAAATTTGGCCTGCGAGTATTGCGGCAAGGTGTTTCCGTTTCGCACAAGACTGCTGTCCCACATCGGCAGCGTTCATCTGAAAAATCGGCGCAACTTTCGGTGTCGCTTCTGCTACAATCTGTACTCGAGCCTCGCCGTTCTCAACGATCACATCAAGACGAGACACGCGACGACTTACACCTGCGAGACCTGCGGCAAGACCTTCAAGGTCGCCTCGAAGTACAAGGCTCACGTTTTGCAACACACCAATCCGAAGCCCTTCGTCTGCAACGTCTGCAACAACAGATACGCCTCGAAGGCGTTCCTCAACGAGCATCTCCTCAAGCACGAAGGCCTGAGGAAACACATCTGCCAAAAGTGCGGCGCCAGCTTCGCTCAAGCCAGCCATCTCGCGGCGCATCGTCACGTGCACGGGGAAAAAACCCACGCGTGTCCCGAGTGCGGGAGGAAATTCAATCGACGGGACAACATGAAGATCAACGAAACCGACGGATTGTCCCACGTTGTTTGCATGCGATGCATCGGCACACTGGAGTTCATCGACGAGTTTCAAGAGAATTGCCAAAAGACCCAACAGAGACTCGTCGCTGCGAAgAAGTCGAGGAAGTGTCCGAGGATCGGAGCTCGCACGCCATCGTCGGTGACATTGGAAGATCCGGAATCCGACAAGGAAAACTCCTCGCCGATTCTCACCCCGAGCCGGAAGAGAAAGCGCCAATCGGCGACGGTCGAAGCCACGAAAGTTCTACAACCGCTGCCGCTCACGACGAACAAGAATGTGTCGATAAGCATCAAAGAGTCCGACAGAGCCATCGCCGAATTGTCGATGAACAAAAAGGACCAAAGCAGTTCCGTCGAagccgcgaagaaaaatgaccAAAGAAATCTCATCGAAACCGCGACCAAAAATgaccaaaaaaattctctccgaatcgaCACCAAACACGTTGAAAAAGCTTCTCTCCAGACGACGTCGCAAGATGAAAAAGACAATGTCCTCGAATTCACGaggaaaaacgacgaaaaatcttctCTTCGAACCGAAATTaaacacgacgaaaaaaatgtcctcgatGCCCCTAAAATCGTCGCAGTTTCGAGCGCCAAAGCGAAAAGCGACGGTGGtacaaaaatcgaatcgcCCGGGCCGAAAACTTTGGAAAATTCGTCTCTCAATGCCGATCACTCGGATCGTCGTACGCGAAGTCGCGCAAGTACTCGAAACGTTCCGAGAAAGTCCTTCAACGAATCCGGAGCGACGCTCTCCTCGCCGAAGAGTAAACCGACCACGGTCATcgtgaaattggaaaaatccGAGCAGTCCGAGAGTTCCTTGAAGTCGAACGAGCTCGTATGGATTCCGAGCGAGTTCGTGGCGTTGCCCGAGGCGGAAAAGCCGAAATcctcgagaaacgagacgacgcCCGACGAGTGTCCGATCGCCGGCGACGAGGCTGGAAAACGACTGGAAAAGAGCCCGGAATCTTCGGCCtcgagagcgacgacgaaCGCCGTCGTGACGAAAGAAATCTCCAATGCCAAAGCCACGAGGAAGAGTGTGATAGAAATTACACCGGCTAAAGTtgtcgaaacgaaagaaatcaaagaaatcaaggaaaagaaagaaatcaaaGAAATCAAGGAAACGAAACATATCAAAGAAATCAAAGAAATCaaggaaacaaaagaaatcaacgaaatcAAGGAAACGAAAGGTATAAAAATGGAACTTAGGGTATCGAGATCGACCCTATCGAAGAAGGACGTCCAGTTATTGCTGGAGGAAGGCGAAGagaccgacgacgaggaggaggaaggaGAGGAGCGAAAGAAATTCGGCAAAATCGCGGATCTGATAACCGAGGAGCAAAAgatggaaatcgaaaaattttacacCGTGGACATGACTGTCGTGGACGAGGAGGTGGTGGGCGAGAAGATCGTGTTCCTCGACAAGAAGACGTTCGGTTGCAAGATATGCAAGGCCTCTTATCTGCGACAGGACAAGTGCCAGGTGCACATTTGGGGCCACCTCGAGATGAAGCCCTACCGTTGCAACGCTTGCGACTTCGCAACGGTGACCGTCAGCAACATACGTTGTCACATTCGCAAGAGCCATCTCAAGATAAAGCCTTACGCTTGCGAATTGTGCGAGAAGCGCTATGTCACGGCCTTCCTTCTCGAGGAACACATGAACACTCACACCGGATCGAGACCGTACAAATGCAATACCTGCGACTTCAGTAGCTCCAGTAGGCAAGTCCTGAGCTATCACAAGTCGACTCACAAACCGGTCAAGGACATAACTTGCCACGTGTGCGGCAAGGAATTTTACTCGAAGAGTCGCATGCGGGCGCACATGGTCATTCACAACAAGGACAAGGCGGCGAACATGTGCAAGCTCTGCTCGATATATCTCTGCAACAGCGAGGCCCTCGAGAGGCATCACGCCAACGTGCACTCCAAGGATTACATCTGCAACGTCTGCGAGAAGCGTTGCAAATCGAAGAAGGCTCTGAACAATCACCAAAACGTTCACTCGGCGGCAAAATACAAATGCAATCTCTGCTCGAACGTCTACAAGAGCAGTCACATACTGAAGGAACATCTGCTGAAGCACAAGGGCATAAGAAAGTACAAGTGCAACACGTGCGGCAAGGATTTCGCTCAACAATCCCATCTCGCCGCTCACATGGCTGTCCACAGCGAAAAAAGatttttttgtccggGCTGCAATCGTCCGTTCAATCGTCACGACAACATGAAGATGCACACGAAGCGCTGCGAGGCCTTTCTCGCCAATCCCGAACTGAGCAGCCTCCTCGCGATACGACGAAGTCGAAGCAAGCCCGCcgaaaatgtatcgaaaatCGAGGATCTCGAGGCCAGCCTTATCATGGACGAGTCGCTGTCGCCGGAAATTCAACGAACCAAGAAAGTAACTTCCGCTGGGAAACGCTCCATATCGCCGAATTCTCAGCGCCAGATCGGACTATTTGCCGTTGGGGGATCGAGCAACGGAACAGGAGAGATCGAAGACTCGACTATGATTATCGGAAACACGGTCGTTATTCCGTGCACGTAA
Protein Sequence: MEMKLEETQVCRLCGQCESIFIDVFGEEGTKRLLGLKIHTKVNIVIDEEDPLPKAICVQCLGKLEFVCDFQEECLRTQQELRDRYNLPPLSDSEEIKIEDPPIAPPSTSTNNNSTDKNLNPPLTTASNASPERVFAERCPEVAEISVSTYEKPESENTTPKPRRKLRSLRRSRSRSNENPPNPPKAPNARDQTTTKRWLRSRNSIVPPSAEKIAENASISRRLRSHSDSPEKKENTEIPPEKSPKRAEKLPEDSSMIQIPTSALNKVLTVVSSSPDMEVSVKESTNRTGDIEDISFTLELRRKKDESEFLTVLAKVFPDQGSCLVGSKIVDLLKNESNVEIDKIVSTIMNGNNRKATSPNGITKIDELEEMEKRLSATLNPEELFRIDGEEIRVDDNVEQVVADNQTNYTCKLCRKIYERRDKCTVHVKTHLGIKQYACTLCCAKFVCKSDVMKHIRCSHTNPRPMQCPKCPKRFRSKFDLTEHDNVHKGIKPYRCTDCGQSYHHKVSLQMHVKSHLPPQNLACEYCGKVFPFRTRLLSHIGSVHLKNRRNFRCRFCYNLYSSLAVLNDHIKTRHATTYTCETCGKTFKVASKYKAHVLQHTNPKPFVCNVCNNRYASKAFLNEHLLKHEGLRKHICQKCGASFAQASHLAAHRHVHGEKTHACPECGRKFNRRDNMKINETDGLSHVVCMRCIGTLEFIDEFQENCQKTQQRLVAAKKSRKCPRIGARTPSSVTLEDPESDKENSSPILTPSRKRKRQSATVEATKVLQPLPLTTNKNVSISIKESDRAIAELSMNKKDQSSSVEAAKKNDQRNLIETATKNDQKNSLRIDTKHVEKASLQTTSQDEKDNVLEFTRKNDEKSSLRTEIKHDEKNVLDAPKIVAVSSAKAKSDGGTKIESPGPKTLENSSLNADHSDRRTRSRASTRNVPRKSFNESGATLSSPKSKPTTVIVKLEKSEQSESSLKSNELVWIPSEFVALPEAEKPKSSRNETTPDECPIAGDEAGKRLEKSPESSASRATTNAVVTKEISNAKATRKSVIEITPAKVVETKEIKEIKEKKEIKEIKETKHIKEIKEIKETKEINEIKETKGIKMELRVSRSTLSKKDVQLLLEEGEETDDEEEEGEERKKFGKIADLITEEQKMEIEKFYTVDMTVVDEEVVGEKIVFLDKKTFGCKICKASYLRQDKCQVHIWGHLEMKPYRCNACDFATVTVSNIRCHIRKSHLKIKPYACELCEKRYVTAFLLEEHMNTHTGSRPYKCNTCDFSSSSRQVLSYHKSTHKPVKDITCHVCGKEFYSKSRMRAHMVIHNKDKAANMCKLCSIYLCNSEALERHHANVHSKDYICNVCEKRCKSKKALNNHQNVHSAAKYKCNLCSNVYKSSHILKEHLLKHKGIRKYKCNTCGKDFAQQSHLAAHMAVHSEKRFFCPGCNRPFNRHDNMKMHTKRCEAFLANPELSSLLAIRRSRSKPAENVSKIEDLEASLIMDESLSPEIQRTKKVTSAGKRSISPNSQRQIGLFAVGGSSNGTGEIEDSTMIIGNTVVIPCT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00398313;
90% Identity: -
80% Identity: -