Basic Information

Insect: Ischnus inquisitorius
Gene Symbol: -
Assembly: GCA_963924025.1
Location: OZ001243.1:4210348-4213413[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 2.7 2.2e+02 2.9 0.0 1 20 382 401 382 403 0.87

2 16 0.043 3.6 8.5 2.2 1 23 411 434 411 434 0.96

3 16 0.56 47 5.0 0.2 1 20 441 460 441 462 0.89

4 16 0.2 17 6.4 1.3 2 20 471 489 470 491 0.91

5 16 1.4e-05 0.0012 19.5 3.0 1 23 522 545 522 545 0.96

6 16 0.0045 0.37 11.6 0.1 1 23 558 581 558 581 0.97

7 16 2.8e-05 0.0023 18.5 3.1 1 23 608 631 608 631 0.93

8 16 0.0025 0.21 12.4 1.0 1 23 637 659 637 659 0.96

9 16 0.085 7.1 7.6 3.3 1 23 674 696 674 696 0.93

10 16 7.9 6.6e+02 1.4 0.2 3 23 704 725 702 725 0.87

11 16 0.00045 0.038 14.7 2.6 1 23 739 761 739 761 0.99

12 16 2.1e-07 1.8e-05 25.2 1.7 1 23 767 789 767 789 0.98

13 16 0.0092 0.76 10.6 1.5 1 23 795 817 795 817 0.97

14 16 0.0042 0.35 11.7 4.1 1 23 823 845 823 845 0.99

15 16 1e-07 8.5e-06 26.2 0.4 1 23 851 873 851 873 0.99

16 16 1.5e-05 0.0013 19.4 2.3 1 23 879 902 879 902 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	2.7	2.2e+02	2.9	0.0	1	20	382	401	382	403	0.87
2	16	0.043	3.6	8.5	2.2	1	23	411	434	411	434	0.96
3	16	0.56	47	5.0	0.2	1	20	441	460	441	462	0.89
4	16	0.2	17	6.4	1.3	2	20	471	489	470	491	0.91
5	16	1.4e-05	0.0012	19.5	3.0	1	23	522	545	522	545	0.96
6	16	0.0045	0.37	11.6	0.1	1	23	558	581	558	581	0.97
7	16	2.8e-05	0.0023	18.5	3.1	1	23	608	631	608	631	0.93
8	16	0.0025	0.21	12.4	1.0	1	23	637	659	637	659	0.96
9	16	0.085	7.1	7.6	3.3	1	23	674	696	674	696	0.93
10	16	7.9	6.6e+02	1.4	0.2	3	23	704	725	702	725	0.87
11	16	0.00045	0.038	14.7	2.6	1	23	739	761	739	761	0.99
12	16	2.1e-07	1.8e-05	25.2	1.7	1	23	767	789	767	789	0.98
13	16	0.0092	0.76	10.6	1.5	1	23	795	817	795	817	0.97
14	16	0.0042	0.35	11.7	4.1	1	23	823	845	823	845	0.99
15	16	1e-07	8.5e-06	26.2	0.4	1	23	851	873	851	873	0.99
16	16	1.5e-05	0.0013	19.4	2.3	1	23	879	902	879	902	0.97

Sequence Information

Coding Sequence: ATGCTGACGTTAATTCTGCTAACTCAGCAAGGACAGCAGATAGAATTGAATGTAGAGCCGGAGGATACGTTCGCCGATTTGAAGAGACGGTACGAAGATACAGATGGCTTATCCGAATCACTCGAACAACTCATTACGAATGGAGCTAGCGTCCAAGAAGAGACAAAGATATTCGACTACGTAACGAGCAGTGcaaACGAATGGTTCAGTGCAGATCAGTCGCAAGATCTACAGGTAGAGTCCTCTCGAGCGACGAATTTgaacacgaaaacaaaagaatgtTGCGCCGAAGGCTGCTCCAACTCCGAAGCTGTTACTCCTGGTAAAACATTTTTCCCTTTACCTACAGATCCCGAAAGaCTGCCCCTTTGCCTTATAGAAATAGGAAGGTCAGATCTGTACAATCAGATTCTTGGATCGAACAGCCATGGCCATCAAAACTACTTTTTGTGCGAGGATCACTTTAGCGAGAATCCTTCGGCTTTACCGTTTGTCGTCGAGCAACCAGCGATTTCGCTGCTGAAGCCAAAAAACGCTAGAATACAGCCAACCGCGAGTAAAGAACCGAACTGCGAGCTCCGAGACATGAAATCCACAAGCGAAGGTCCCGCTCTCGATGCTTCGGAGACCCTCGACGACTTTCAGCATCCCGGAATTCTTTGCCGACTATGCGGCGAAGTAACGACGAATCCAATCCGCTTGTACGCCGATGAAGACGCAAATGTGGATTGCAGTATCGCggataaaataaacttgtgcCTTCCCGTTACGgTGACCGTAACGGATCCGCTGCCTAAGCAAATATGCCAAGATTGCCAATTGAAATTGAACGCTTGCCACGAGCTTGCCGTGTCTTCGTTGCAAACGGAAGACAAGCTCATTCTTCTTTTGCGACAAAAGAAATTCTGCGCAAACAATGCCACGGAACAGCAATGTCCCCTGTGCCTGGAAGGAGACATGcgaatcgtcaaaaaaagTGGTATCTACCGCAAGGAGGATCTAAAAAATGCTATCACTGACTTCGACGACCCGAAACACGCAAGAGACGCGTCTGTGATCCTCAAGGATCGCGACGACTGTAACGACGACGGTTTGAATATTCGGTTCCCGGAGAGCAGCATACTTTCTTTGCCGGACGGAGAATTTCCCTGTTCCGTGTGCAACGAAAAGTTGATTAACGTTGGGGCGATACGAGCGCACGTGTGTGCCACTGAGCGCAAAATTTCATCTTACAATTGCGTGATATGCAAAAACACAAATTTCACGTATCCTCACGAGCTCGAACTACACTATCGTCGACACGGCATGTTGGGGGACAAATTTTTCTGCGAACTGTGCGGCTACGCTTGCGACGACCTCGACGAAGCAACGGAACACGTGACGACGTGCAGACCCGAGTTTTGGGAGATACGTTGCGAAGCCTGCGACAAAACGTTTCCGAATATCAGAACGATGAACGACCATCATTGTTACCGAATGTCTCCGGATTTTCACGTGCCGGATTTGATATTTTCGTCGGAATCGGAATTgacgaaatcatcgaaaaatcgacaaccGATACGATACGATTGTCACTTCTGTCGGAAGCAATTCACACGGAAGGGAAGCTTGCAGAAGCACATATCCGTCGCGCACGTGGAGCCGACGGACAATCCGACGGCTAAGAAGTGTTACAAGTGCAAAAGTTGCAACGAGGCTTTCGCCCGCGAAATCGACGCCGAGGAGCACATAAATGTCCAACATCTCGGCACCTACGCTTTTACCGATTTCAACACCGTCGGTCACGAATTTGCTACCGACGAGCTGACGATCGGGAGTCTGTACACTTGCGAGTACTGCGAGCGCTGCTTCACGACACCGAGTTCTCTTCACGATCATCGGGAGGCCGAGCACGAGGCAACGAGTCGATACTCTTGTCCCCAGTGCGCCGAGACATTCGACTCTCACAAGCAGCTCGTCGCGCACAAGACTCTCCATTCGCATCGCAAAGccctcgacgatctcgcgatGAAGCAGCTCTACTTGTGCAGATACTGCGACAAAGCGTTTCTTCATCACTCGACCCTCGCCAGTCACGAGCTTCAACATCCCGCGACCGCATCGTATCTCTGCAGACCCTGCAATCTGCGATTCGAAACATACCGAGAAGTTGCGTCGCATCGCGACATCGTTCATCCCTATCAGTCGGAGCTTCACGAGAGCGCGAGTCGCGCCTACAAGTGCCAGTACTGCGAGAAATTGTTTTCCCACGAGGTCGTGCTCGTGAAACACACGAGAATGCACACGGGCGAGCGACCGCACAAGTGCACGATATGCGGCAAAGGATTCTCTCAAAGTTCCGGTCTCTACACTCACATGAAGATCCACTCGGATCTCAGGCCCTACAATTGCTCGAAGTGTCCGCGCACCTTCAAGATCAAGGGCGATCGCGACAATCACGTGAAGAAACACTCGGGCAATCGGCCGTACAAGTGCGAGTTTTGCTCGAAGGCATTCATGACCCAGCACGTTTACAGTCAACATCGCCGAATTcacacgaacgagagaccgTACAAGTGCGACATATGCGGCGAAGCTTTTCGAAGATCTTACGTGCTCACGGTGCACATGAGACGACACACCGGTGAGAAACCCCACTCCTGCGACATGTGCCCGAAAACTTATCGACAACGCGGCGATCTCGTGAAACACCGAAGGAGTCAGCACGGAATGAGCGTCATTGCCCGCTCCGAAAttgattttccgaaaaaattcgacgatagTTCGTACGATTCAATTATCAAAACCGGCGGTAAGATAATCGAAGGCAGGGTCGGCAATTCTTTGCTGTTGACGCTCTGA
Protein Sequence: MLTLILLTQQGQQIELNVEPEDTFADLKRRYEDTDGLSESLEQLITNGASVQEETKIFDYVTSSANEWFSADQSQDLQVESSRATNLNTKTKECCAEGCSNSEAVTPGKTFFPLPTDPERLPLCLIEIGRSDLYNQILGSNSHGHQNYFLCEDHFSENPSALPFVVEQPAISLLKPKNARIQPTASKEPNCELRDMKSTSEGPALDASETLDDFQHPGILCRLCGEVTTNPIRLYADEDANVDCSIADKINLCLPVTVTVTDPLPKQICQDCQLKLNACHELAVSSLQTEDKLILLLRQKKFCANNATEQQCPLCLEGDMRIVKKSGIYRKEDLKNAITDFDDPKHARDASVILKDRDDCNDDGLNIRFPESSILSLPDGEFPCSVCNEKLINVGAIRAHVCATERKISSYNCVICKNTNFTYPHELELHYRRHGMLGDKFFCELCGYACDDLDEATEHVTTCRPEFWEIRCEACDKTFPNIRTMNDHHCYRMSPDFHVPDLIFSSESELTKSSKNRQPIRYDCHFCRKQFTRKGSLQKHISVAHVEPTDNPTAKKCYKCKSCNEAFAREIDAEEHINVQHLGTYAFTDFNTVGHEFATDELTIGSLYTCEYCERCFTTPSSLHDHREAEHEATSRYSCPQCAETFDSHKQLVAHKTLHSHRKALDDLAMKQLYLCRYCDKAFLHHSTLASHELQHPATASYLCRPCNLRFETYREVASHRDIVHPYQSELHESASRAYKCQYCEKLFSHEVVLVKHTRMHTGERPHKCTICGKGFSQSSGLYTHMKIHSDLRPYNCSKCPRTFKIKGDRDNHVKKHSGNRPYKCEFCSKAFMTQHVYSQHRRIHTNERPYKCDICGEAFRRSYVLTVHMRRHTGEKPHSCDMCPKTYRQRGDLVKHRRSQHGMSVIARSEIDFPKKFDDSSYDSIIKTGGKIIEGRVGNSLLLTL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00398328;
90% Identity: -
80% Identity: -