Basic Information

Insect: Ischnus inquisitorius
Gene Symbol: -
Assembly: GCA_963924025.1
Location: OZ001245.1:5280359-5283198[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 5.7e-05 0.0047 17.6 1.5 1 23 338 360 338 360 0.98

2 12 0.00099 0.082 13.6 5.8 1 23 364 386 364 386 0.98

3 12 0.00031 0.026 15.2 2.9 1 23 391 413 391 413 0.96

4 12 1.9e-05 0.0016 19.0 2.8 1 23 464 486 464 486 0.98

5 12 0.00094 0.078 13.7 1.4 1 23 491 513 491 513 0.97

6 12 0.00012 0.0099 16.5 2.2 1 23 563 585 563 585 0.98

7 12 0.0019 0.16 12.8 0.7 2 23 593 614 592 614 0.97

8 12 1.2e-06 9.8e-05 22.9 2.1 1 23 625 647 625 647 0.96

9 12 7.4e-05 0.0061 17.2 1.0 1 23 653 675 653 675 0.98

10 12 0.00019 0.016 15.9 0.7 1 23 681 703 681 703 0.98

11 12 5.6e-06 0.00047 20.7 2.0 1 23 709 731 709 731 0.96

12 12 0.0001 0.0084 16.8 0.3 1 22 737 758 737 758 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	5.7e-05	0.0047	17.6	1.5	1	23	338	360	338	360	0.98
2	12	0.00099	0.082	13.6	5.8	1	23	364	386	364	386	0.98
3	12	0.00031	0.026	15.2	2.9	1	23	391	413	391	413	0.96
4	12	1.9e-05	0.0016	19.0	2.8	1	23	464	486	464	486	0.98
5	12	0.00094	0.078	13.7	1.4	1	23	491	513	491	513	0.97
6	12	0.00012	0.0099	16.5	2.2	1	23	563	585	563	585	0.98
7	12	0.0019	0.16	12.8	0.7	2	23	593	614	592	614	0.97
8	12	1.2e-06	9.8e-05	22.9	2.1	1	23	625	647	625	647	0.96
9	12	7.4e-05	0.0061	17.2	1.0	1	23	653	675	653	675	0.98
10	12	0.00019	0.016	15.9	0.7	1	23	681	703	681	703	0.98
11	12	5.6e-06	0.00047	20.7	2.0	1	23	709	731	709	731	0.96
12	12	0.0001	0.0084	16.8	0.3	1	22	737	758	737	758	0.96

Sequence Information

Coding Sequence: ATGGCAATGAATCAGAGTTACTTCGACGCACCGCCGATAAACATGGACCGAGTTTGCCGGGTTTGTTTGACGGAAGGCGCGAATTTGTCGCCGATTTTTTGCACCGATCAGGAGGACGGCTTATCGCAAAAGATTCAAGTGTGCGGCTCGATCGAGATACACGAGAACGACGGTTTACCGTCGTTGATATGCAACGTCTGCATATGCAACGCCAGTGTCGCACACGAATTTCGACAACAGTGTCAACGTTCCGACACGCAATTGAGGCTCATTTACGATAAACCCGTGAATTCTGCCATTTCCGATTCTTGTACGCAGACTGAGCCACAGACGCGGATAATTCTCACGAggaaagtcccatcgccgCCGACAACGTACTACGTCAAGCAAGAGTTGCAATCGGCGACAACGCAGGACTACGCGAATGCGATAGAAGCCTACGCGGAGAGTCACGAGACCGCAGTGACCGAACGGCAGCATCATCAACAGCACGAGGTCGATCACGAGGAGCATGCGATCGATTGTCAGGACGAGAAGCTCTTCCTCTGCAACATCGCCACGTTCGAAGCTCCCAAAGAAATAATCGACAAAGAAACGAGCGATATATTGTGCCACGATTCGCACAGTCGGATTCATTGTAATGCCGAGAGCGGCGAGATAACAACGACGAATCTCGTGACCTTGAACGCGAATGGCCAATTGGAGGAGACCGAATTAATCGTGAAGGAGGACGAGGCGAAGTGCATCGATACGGAGATGGAGGAAGAATACTTGAACGAGCAGTTGTTGAACGAGAGCGTCGAGGAATCGGTAGAGGACGAGAGCGAGGAACTCGACGACAACAGCGAGCAACAGGATCGAGCGGAGCAGCAAGAGATTCCCCAACAGAAGAGAACGTTGTCGCGCAAGGTAAAGAGCGCCACGACAAAATCGTACAGCGAGGACGAGTTATGCGACGAGGATTACTTCGAGGCACTGGCCGACGAGAGTCAAGACTCGGAAGAGCCGAAATTCAAGTGCAACGTGTGCTCGAAACGCTACGCGACCCAGAAGGgcttgaaaaatcattcgcaGGTACACGACAAGAATCACAAGTGTCCGACTTGTCACAAGCTATTCTACAAGCtgaaaaatatggaaaatcACATGAAGATACACGCGACGAAGCCTCACGCTTGTCAGTTGTGTCACGCGAGTTTCTCGAAGCCGCAGAGTCTCGTTCGTCACTTGAAGTCGCACGCGGAGaagatcgtcgacgacgaaacgccGATGACGAGCGTGGACGAGACGGCGAGGAAGGAACGCGCGCCGACGAAGAGCGAGGgcgacaccgacgacgacgaccttGCCGGCCGCGGAATCGATGAATTCGAGAACGCCCCGGGTCTCTACAAGTGCGAGGTTTGCGGACAATTTTGCTCGTCCCTGAAGAATCTCAAGCGTCACACGCTCGTTCACGGTGACAAAAAGTACTCTTGCACGGTTTGCAAAAAATGGTTCTTCAGGCCGGACACGCTGAAGAAACACGCGGAGAAGCACGGGCACGGATTGCTCGACAATCTCGCCGAGGACAACAAATTCTTCGAATCGGACGACGAAGGATTCCCGAACTCGTCAAGCTTCGCCACGGCGTCGGGCGGCGATGTCGGCAAAAAGGACGACATCGACGGCGGACCGAGAGGCGAATACAAGTGCCAGCATTGCGACAAAGTAATGGCGACGAAGAAGGGCCTTCGACGACACGTCTCGATGCACAAGCCCAAAGCCGAGCCGGTCACTTGCGAagtctgtaaaaaaatttgcgcCAGCCAGGCGCGTCTCGCGTTGCATCTCAAGACTCACAACAAGTCGAAGGAAAAAGTACAGAGGGAGTATCTTTGTCACATATGCAGCAAGGTTTATCCGAGCAATTCGTCGCTGACTTATCACATGCGAACTCACACGGGCGTTAAGCCGCACGTTTGCAAAATCTGCAACAGCGGCTTCACGACCACGACGAGTCTCGCCAATCACATACGCATTCACACCGGCGACAAGCCGTTCGTTTGTCACGTGTGCAGCGCAGCTTTCGCGGTCAGCTCGGCGTTCCGGCGACACTTGACGAGACACACGGGCGAGGCGAATTATCTCTGCAAAACGTGCGGCAAGGCTTTCAAGAGGCTCAGCACGCTGAAGGAACACACGTACACGCATTCCGGTGAGAAACCATACGTTTGCAAAACTTGCGGCGCGGCGTACAGCCACAGCGGAAGTTTGTTCGCGCATCAGAAACGATGCCGGGTACAATACGGCGAGATGCTCGAGGAACAACACACGGTCGCTCATCATATTCACGTGAACAATGTGCAAACGGCCGTTAGATCTCTCGCCGTAATCGGACAAATGTACTAG
Protein Sequence: MAMNQSYFDAPPINMDRVCRVCLTEGANLSPIFCTDQEDGLSQKIQVCGSIEIHENDGLPSLICNVCICNASVAHEFRQQCQRSDTQLRLIYDKPVNSAISDSCTQTEPQTRIILTRKVPSPPTTYYVKQELQSATTQDYANAIEAYAESHETAVTERQHHQQHEVDHEEHAIDCQDEKLFLCNIATFEAPKEIIDKETSDILCHDSHSRIHCNAESGEITTTNLVTLNANGQLEETELIVKEDEAKCIDTEMEEEYLNEQLLNESVEESVEDESEELDDNSEQQDRAEQQEIPQQKRTLSRKVKSATTKSYSEDELCDEDYFEALADESQDSEEPKFKCNVCSKRYATQKGLKNHSQVHDKNHKCPTCHKLFYKLKNMENHMKIHATKPHACQLCHASFSKPQSLVRHLKSHAEKIVDDETPMTSVDETARKERAPTKSEGDTDDDDLAGRGIDEFENAPGLYKCEVCGQFCSSLKNLKRHTLVHGDKKYSCTVCKKWFFRPDTLKKHAEKHGHGLLDNLAEDNKFFESDDEGFPNSSSFATASGGDVGKKDDIDGGPRGEYKCQHCDKVMATKKGLRRHVSMHKPKAEPVTCEVCKKICASQARLALHLKTHNKSKEKVQREYLCHICSKVYPSNSSLTYHMRTHTGVKPHVCKICNSGFTTTTSLANHIRIHTGDKPFVCHVCSAAFAVSSAFRRHLTRHTGEANYLCKTCGKAFKRLSTLKEHTYTHSGEKPYVCKTCGAAYSHSGSLFAHQKRCRVQYGEMLEEQHTVAHHIHVNNVQTAVRSLAVIGQMY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00397517;
90% Identity: iTF_00398292; iTF_00397517;
80% Identity: -