Iinq001000.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ischnus inquisitorius
Gene Symbol
Znf711
Assembly
GCA_963924025.1
Location
OZ001243.1:11846480-11847773[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 10 1e-06 8.6e-05 23.0 2.0 1 23 70 92 70 92 0.99
2 10 3.6e-06 0.0003 21.3 2.1 1 23 102 124 102 124 0.97
3 10 8.9e-08 7.4e-06 26.4 1.1 1 23 130 152 130 152 0.97
4 10 0.00021 0.018 15.7 2.8 1 23 157 180 157 180 0.98
5 10 3.7e-05 0.0031 18.1 2.8 1 23 186 208 186 208 0.97
6 10 0.00016 0.013 16.1 0.3 1 23 214 237 214 237 0.97
7 10 1.9e-05 0.0016 19.1 1.5 1 23 247 269 247 269 0.94
8 10 2.6e-07 2.2e-05 24.9 5.1 1 23 273 295 273 295 0.96
9 10 3.4e-05 0.0028 18.3 1.1 1 23 301 323 301 323 0.98
10 10 3.1e-07 2.6e-05 24.7 1.6 1 23 329 351 329 351 0.98

Sequence Information

Coding Sequence
atgATTCCCCGTCGTCTAGACTTCAACGTCAAGGATGAACTGGCGGCGGAAGTGGATATCGAAGATCTGGATCTCGCCGGCAGAATGCAAGAAACCGATCCTCTGGACATTGGCTTTCACTATCTGATGGATTCGCCGGATAAGGACATTCCCGAAGCGAACACGGCGAAGAGGAAAAAGTACGAGAGAAAGCGCGTACCCATGAGGTACGAGTGCAAGGAGTGCGAGCAAATTTTCACGAGAAAAGCCAAGTACGAGCGTCACATGAAGAGACACGAGAATCCAAAACCGGCGCCGGAGAAATTCGATTGCGAAACTTGCAATCTCAAATTTCCCCGTAAATCCGAATACAAGCGTCACATGTTGAAGCACAGCGACGAGAAGCCTCACAAGTGCGAAATTTGCGGGAAATCGTTCAAGCGATCGTACGAGGTGACGGCACACATGGACATACACAGCGGTCCCAAGTATACGTGCGAAATCTGCAATTTCACAACGGCGTACAAAGTTTCGCTCAAGACTCATCATCGTCGTGTGCACGAGAAGGATTATCCGCACAAGTGCGACAAGTGCGACAAGGGTTTCATGTCGAAATACGAATTGGAGGATCATCGTACGAGTCATCTCGGCACGAAGAGTTTCATATGCGAGATATGCGGCAGCGCTTACTCGCAAAAGACCTATCTTCTATATCACAAGCGTGTCATACACGGACAGCAGAACCGGCCGCCGAAGGAGTACAAGTGTCCGTCGTGCGACAAAACTTTCGCTTCGGAATATTGTCTGCAGAATCACGTTGGTCTACATTCGCAGAAATTCTTGTGCTCACACTGTGGCAAATCGTTCGCGACGAATCATTCACTGAAGATGCACATGCGCATGCACACCGGCGAGCGGCCACACAAGTGTAATCTGTGCGCGAAATCATTCGTCAGATCGAACGCTCTCGCGGTTCACAAGTTAACTCATACGGGTAAGAGACCATACGTTTGTGATCTGTGCGACAAAAGCTTTACTCAACGCACCACGCTGATGGCGCATAGAAAAAAGCATCCCGGAAATCatccgccaccgccgccgacGTCTTTGAGCAAACTGGACATCGTCATGGATTCGAATTCTTAA
Protein Sequence
MIPRRLDFNVKDELAAEVDIEDLDLAGRMQETDPLDIGFHYLMDSPDKDIPEANTAKRKKYERKRVPMRYECKECEQIFTRKAKYERHMKRHENPKPAPEKFDCETCNLKFPRKSEYKRHMLKHSDEKPHKCEICGKSFKRSYEVTAHMDIHSGPKYTCEICNFTTAYKVSLKTHHRRVHEKDYPHKCDKCDKGFMSKYELEDHRTSHLGTKSFICEICGSAYSQKTYLLYHKRVIHGQQNRPPKEYKCPSCDKTFASEYCLQNHVGLHSQKFLCSHCGKSFATNHSLKMHMRMHTGERPHKCNLCAKSFVRSNALAVHKLTHTGKRPYVCDLCDKSFTQRTTLMAHRKKHPGNHPPPPPTSLSKLDIVMDSNS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00398283;
90% Identity
iTF_00397513;
80% Identity
-