Basic Information

Insect: Ischnus inquisitorius
Gene Symbol: ZIPIC
Assembly: GCA_963924025.1
Location: OZ001245.1:8550297-8553685[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0013 0.11 13.2 0.2 3 23 125 146 123 146 0.96

2 15 0.0003 0.025 15.3 0.2 2 23 151 173 150 173 0.93

3 15 0.00079 0.066 14.0 0.4 3 23 248 268 247 268 0.97

4 15 2.2 1.8e+02 3.1 0.6 2 23 274 296 273 296 0.94

5 15 0.00027 0.022 15.4 0.5 1 21 306 326 306 327 0.94

6 15 0.0011 0.096 13.4 8.3 1 23 337 359 337 359 0.98

7 15 0.00047 0.039 14.7 0.6 1 23 372 394 372 394 0.98

8 15 0.0053 0.44 11.3 0.9 1 23 402 425 402 425 0.96

9 15 1.6e-05 0.0013 19.3 5.1 1 23 431 453 431 453 0.98

10 15 3.1e-05 0.0026 18.4 1.0 1 23 456 479 456 479 0.96

11 15 0.04 3.4 8.6 2.8 1 23 498 520 498 520 0.96

12 15 0.00045 0.038 14.7 0.5 1 23 526 548 526 548 0.97

13 15 3.4e-08 2.8e-06 27.7 2.7 1 23 553 575 553 575 0.98

14 15 2.4e-06 0.0002 21.9 5.7 1 23 583 605 583 605 0.98

15 15 9.3e-05 0.0078 16.9 0.5 1 23 611 633 611 633 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0013	0.11	13.2	0.2	3	23	125	146	123	146	0.96
2	15	0.0003	0.025	15.3	0.2	2	23	151	173	150	173	0.93
3	15	0.00079	0.066	14.0	0.4	3	23	248	268	247	268	0.97
4	15	2.2	1.8e+02	3.1	0.6	2	23	274	296	273	296	0.94
5	15	0.00027	0.022	15.4	0.5	1	21	306	326	306	327	0.94
6	15	0.0011	0.096	13.4	8.3	1	23	337	359	337	359	0.98
7	15	0.00047	0.039	14.7	0.6	1	23	372	394	372	394	0.98
8	15	0.0053	0.44	11.3	0.9	1	23	402	425	402	425	0.96
9	15	1.6e-05	0.0013	19.3	5.1	1	23	431	453	431	453	0.98
10	15	3.1e-05	0.0026	18.4	1.0	1	23	456	479	456	479	0.96
11	15	0.04	3.4	8.6	2.8	1	23	498	520	498	520	0.96
12	15	0.00045	0.038	14.7	0.5	1	23	526	548	526	548	0.97
13	15	3.4e-08	2.8e-06	27.7	2.7	1	23	553	575	553	575	0.98
14	15	2.4e-06	0.0002	21.9	5.7	1	23	583	605	583	605	0.98
15	15	9.3e-05	0.0078	16.9	0.5	1	23	611	633	611	633	0.98

Sequence Information

Coding Sequence: ATGAAAATGGATACACTCTCTGTAAGAAGCAGCAAGATCGAATGGGACAATAATTCCGAAGACTCAATGGAAAAAATCAGTAGATGTCTTCCGATCGTCGTGTTATCAAACGACGATTTGCCGTCCCACATTTGCTCCGCGTGCCTTCGAAGTTTAAACGTGAGTTACACACTCATTGTTACGTCGATACAAGTCGATTCGCGTCTTCGGCATGGAGTGACTCAGTGTGAATTCAGAGAGAAATCTGAGCCTGCAATCTGTACAAATGGTTCCGAAAACTTTCGGCTAACGGACAAACGTAATTCTAAAGACGTTCTTGTTGCACACACGGAGAGACTGAATTTAAGAGCGATATGCCACGGTCCAATGAACTGCGGAATGTGCGAGAAAAGGTTCATCGATATGGACGAATTCGATCGGCACATCGAGACCGAACATTTGTTGCCCTGGCCATGCAGTCTGTGCGACAAGAGTTTCGAGTCTTCGGAAAAGCTCGTTGAACACAAGAAAGCAATGCACGcgggaaattttttaatctgcACCGCGTGCGTCGATGCTGAAAGATTCGCGCGCGACTCGCCGTTCGTGACGGAAGAGCAGAACAGTCGCATGTTTGTAGACAAGATAAAGCGTTTCTGGACGCGAGAGCCGAAAAAATCCAACGGAATCGAACGAAGAGCGGAGAACGCAGCGATCGAAGGATCCacggaaaagaagagaaacgcCGGATTTTTGGCGATGTGCCATATATGCAAAATTGCTTTCGGTACCGGCGAACTTCTCACCGCACATCGACGAatacatgagaaaaaaatgcttcgttGCTACATATGTCAGACCGACGCGATGTCGATTTATGAACTTTTTCTTCACAAGCGCAAAAATCACAATGTCTACAAGAGGGTACAATTGAAATTCGTGTGCGACACTTGCGGGAAATATTTCTCAAACAACTGGCAGTGGCTGAATCATCGACAGAAAATCAATTGCAAGAGACGCACGTCGAGTCACACTTGCAAATATTGCAACGGTAACTTTACGACGAGTTGCAAACTCACGCGACACTTGAGAAAACACAGAGACGAAATGCTGAAAGATCCGTCcgcgacgatttatcgatgcGTTGCTTGTccaaaaatattcgtcgataaagaattttaccaaaaACATCGGAATGTACACGATCCTGAATGTTGGGGCAAATTCAAATGCGGCCCTTGCAACAGATCGTTCAGAGACATGAGACGATTGCGCGAGCATCAGCTGTCGATCCACGAAAATGTTAAACCACATCAGTGCGATGTTTGCGGTAAAATGTTTCATCGATTGTCGAATATGCGCGCTCATCGGAAAAAGCATTCTGGTCACAAGTGCGAACACTGCGACGAAGTTTTTGAGAGACTGCGATCGCTAGCCGAACACATCAAAGCCGTGCATGATTTGGAGCCGAACTTCAAGCTGGCACCGAAAAAGCAATACACCAGCGGCTGCTTCGTGTGTCGATTTTGCGGGAAAAAATTGGCGACCCATCAGTCTCTCCTTGATCATGAGCACATTCACACGGGCGAAAAGCCCTATGCTTGCAAGATTTGCGAGAAAACTTTCAGaAGTTATACAGCAAGGTGGGCTCACGCGCAGCGTCACATTAAAGGAACTTACATTTGCGAGCATTGCGGCAAATCTTTTAGCTACAAACAGAATTTAACGACGCACATGCAGGTGCACGTGCCGGTGGAGAGTCGGAGGCATCGATGCTCCAAGTGCGGAAAATTATTCCAACGAAAGTCTCATCTGAACGTGCACATGCGAATACACGATGGTGTTCGGCCTTACACGTGCGACATATGTGAATCCAGTTTTACTCAGCTCGGCGACATGAGACGCCATCGGGCGCGTCACTCAAACGGtgatgtttgttcgaaacaGCCGCGAACTAAGACCGTTACAGATTCCAGTAACGAAGAAGATAGAAATTAG
Protein Sequence: MKMDTLSVRSSKIEWDNNSEDSMEKISRCLPIVVLSNDDLPSHICSACLRSLNVSYTLIVTSIQVDSRLRHGVTQCEFREKSEPAICTNGSENFRLTDKRNSKDVLVAHTERLNLRAICHGPMNCGMCEKRFIDMDEFDRHIETEHLLPWPCSLCDKSFESSEKLVEHKKAMHAGNFLICTACVDAERFARDSPFVTEEQNSRMFVDKIKRFWTREPKKSNGIERRAENAAIEGSTEKKRNAGFLAMCHICKIAFGTGELLTAHRRIHEKKMLRCYICQTDAMSIYELFLHKRKNHNVYKRVQLKFVCDTCGKYFSNNWQWLNHRQKINCKRRTSSHTCKYCNGNFTTSCKLTRHLRKHRDEMLKDPSATIYRCVACPKIFVDKEFYQKHRNVHDPECWGKFKCGPCNRSFRDMRRLREHQLSIHENVKPHQCDVCGKMFHRLSNMRAHRKKHSGHKCEHCDEVFERLRSLAEHIKAVHDLEPNFKLAPKKQYTSGCFVCRFCGKKLATHQSLLDHEHIHTGEKPYACKICEKTFRSYTARWAHAQRHIKGTYICEHCGKSFSYKQNLTTHMQVHVPVESRRHRCSKCGKLFQRKSHLNVHMRIHDGVRPYTCDICESSFTQLGDMRRHRARHSNGDVCSKQPRTKTVTDSSNEEDRN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00397508;
90% Identity: -
80% Identity: -