Iinq008736.1
Basic Information
- Insect
- Ischnus inquisitorius
- Gene Symbol
- Sry-delta
- Assembly
- GCA_963924025.1
- Location
- OZ001248.1:6951107-6952301[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-08 6.4e-06 26.0 0.1 10 39 2 30 1 33 0.95 2 2 5.4 3e+03 -1.7 0.0 30 39 57 66 57 71 0.82
Sequence Information
- Coding Sequence
- ATGGAAGCGGTGAGGAATGGAATGTCGCTGAGGAAAGCAGCGGCAATGTTCTCCGTTACAAAGTCCCGGCTTCACCGTTACGTGCGCCAGGATGCGAGGATGCTGGGAATTTTGAACAGTCAAAGGGTGACGTATCCTTGCAAGAACTGCGGCAAGGTGTACAACTACTATTCCAGCTTGGCGAGGCACTTGAAGCTCGAGTGCGGCGTGGAACCGAAATTCCATTGTCCGCTCTGTCCTTACAGAACGAAGCACAAATCGAGCTTGAATACGCATCTTAACGGTAGACATATGAAGCTGCTGAACGACTTCTACGTTCTGCCGAACGGCAGCGGATCGAGCACGTTGGACAGGAACGATATGAAATTCGTGAATAACTGA
- Protein Sequence
- MEAVRNGMSLRKAAAMFSVTKSRLHRYVRQDARMLGILNSQRVTYPCKNCGKVYNYYSSLARHLKLECGVEPKFHCPLCPYRTKHKSSLNTHLNGRHMKLLNDFYVLPNGSGSSTLDRNDMKFVNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00397994;
- 90% Identity
- iTF_00397994;
- 80% Identity
- iTF_00841460;