Iinq018171.1
Basic Information
- Insect
- Ischnus inquisitorius
- Gene Symbol
- bab2
- Assembly
- GCA_963924025.1
- Location
- OZ001254.1:11772378-11774303[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-09 7.6e-07 29.0 0.2 1 36 368 404 368 410 0.88
Sequence Information
- Coding Sequence
- ATGGAAGCCTCGGAGCAATTTTGCCTCCGATGGAACAATCATCAGCAAAACTTGCGCTCGACGATGGCGGAGCTTCTGCAGAATCAGTCGTTCACCGACGTGACCCTGGGCCTCGAGGACGGTCATTCGGTGCAGTGTCACAAGATGGTACTCGCCGCCAGTTCGCCGTACTTCGAATCGTTGTTCGTCGATCTTCCGTACGAGCACCCGATCGTGATACTCAACGACGTCAAGTACCGCGAGATCGTCGCGATACTCGAGTACATGTACAAGGGCGAGGTCAACGTGCCGGGCAACGAATTGCCGGCTCTTTTCAAGGTCGCCGAAGCTCTGGGGATCAAAGGATTGGTCGGCGGAAACCGCGAGTCGCCGGCGCCGCACCTGCCGCAACCGGAAGTCACCGATCGCGGCCTTGAGCGAAGCGCCGCAGAGATCGGCGAGAAAATCGGCGAAAAgatcggtgaaaaaatcgGCATGAGAATCGGCGAGCCCTCGTCGCCGCCGCACTCGACGAGTTCGCCCTATCACTCGAACGGAAAATCGCCGATCGTTGCCGAGCCGAATACGGCGAGGCTTTCCCCGCCCGCTTGGCCATTCGCTCACGGATTTCCCGTGGAAGGTCACAATCCGATAGCGGCCGCGGCCGCTCTGCAATCTTCGCtatcggcgagatactcgtcGCTTCTCGGCGCCCCGTACGACAACGGCGCCGAGGCGGTTCCGCGTCGTCGGCGCAAGCGAAAGATGTCGAGCGGAAGCATAATGATGAATCGGAGCACGCCGATCCTGAGGACGGCTCTGAATCAGGGACAAGCCGACAGTTCGCAGAGTCAAGGCTTGCCGATGCTTCATCACATGAATCGGCAAGATTCGCACTAtcgcagcaacagcaacggCTCGGCGAACAACGAGTCCGACGACAAGCCCAACAGCGTCGACGCTTTCAACTCTCAGCCCACCCACAGCCCTTACGAGAGCGAGACGTCGAtgatcgacgaggacgagggcaAAGTCTCACGGAGATCTTTCTCCGATGACGCGGGCTCAGGTATCTACGGTTCGGCCCAAAAGCACGGATCCGCGAAGCGTTACAAGCAGTACACGCACACGGACATAGCGGGAGCGATAGCGGCGGTTATCGAGAGCGGCATGAGTGCCAATAAAGCCGCAGCGTTGTTCCGAGTGCCGTCGAGAACGCTCTACGACAAAATAAGCCGAGCGAAGAGGGAAGACGTCAAGTACGGCGGAACGGTGACGCCGAAACGTCGGCGCAACGCCAGCAACAGCGGAGCCTGTTTTCCCTACGGAATAGGCGGCAACGCGACCGGCAGCATCTACGGAAATTATCCGGAGAGCGACAACGAAAACGGCCCAACGACGATGGACAATTCGCCGATCGGACTGGACGCGTCGTTCGCTCGCAGCCGCGACAATTCCATCGATCGCGACACCAAAATCGAAAACGTCAGGAAAAGTCCCAGtcctcgatcgacgatcgactcGCAGCCCTCGCACGGCGAGGAGAACGACAACGAGGCCGAGGACTTGTCGGTCAAGCCGAAATCTCAGGTTCACGTTATCGTTCCGCCGTCCATCGCCATAAAAGAAGCGATCTAG
- Protein Sequence
- MEASEQFCLRWNNHQQNLRSTMAELLQNQSFTDVTLGLEDGHSVQCHKMVLAASSPYFESLFVDLPYEHPIVILNDVKYREIVAILEYMYKGEVNVPGNELPALFKVAEALGIKGLVGGNRESPAPHLPQPEVTDRGLERSAAEIGEKIGEKIGEKIGMRIGEPSSPPHSTSSPYHSNGKSPIVAEPNTARLSPPAWPFAHGFPVEGHNPIAAAAALQSSLSARYSSLLGAPYDNGAEAVPRRRRKRKMSSGSIMMNRSTPILRTALNQGQADSSQSQGLPMLHHMNRQDSHYRSNSNGSANNESDDKPNSVDAFNSQPTHSPYESETSMIDEDEGKVSRRSFSDDAGSGIYGSAQKHGSAKRYKQYTHTDIAGAIAAVIESGMSANKAAALFRVPSRTLYDKISRAKREDVKYGGTVTPKRRRNASNSGACFPYGIGGNATGSIYGNYPESDNENGPTTMDNSPIGLDASFARSRDNSIDRDTKIENVRKSPSPRSTIDSQPSHGEENDNEAEDLSVKPKSQVHVIVPPSIAIKEAI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00841221; iTF_00397442; iTF_00398215; iTF_00398001; iTF_00397209;
- 90% Identity
- iTF_00841221;
- 80% Identity
- iTF_00841221;