Iinq004589.1
Basic Information
- Insect
- Ischnus inquisitorius
- Gene Symbol
- KBTBD4
- Assembly
- GCA_963924025.1
- Location
- OZ001245.1:13835909-13837913[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4.2e-06 0.0023 17.8 0.0 3 42 207 246 205 249 0.85 2 4 1.2e-14 6.6e-12 45.2 0.0 2 39 256 292 255 299 0.86 3 4 0.0039 2.2 8.3 0.0 7 34 313 339 309 345 0.86 4 4 3.1e-10 1.7e-07 31.1 0.2 4 39 370 405 367 410 0.93
Sequence Information
- Coding Sequence
- ATGTCTTCGATAGGAACGTGCAGTCAGCCTCCGATCGAGGAGAGCTATTGTTTCAAATGGAGCGATTATCAGAATCACTTGTCGGGAGTTGTTCGTCAACTTCTGGAGGAGGAATGCATGGTCGACGTGACCCTCGTTGCCGCTGGGGAGCGCATACACGCCCATCGTATCGTACTTTGCTCGTGCAGCACTTTGTTTCAAGAATTATTGAGTCAGGTGACGGATGATCACCCGACGATAATATTGAGCGATATATCCGCCCAGGATGTGAGATCGATTGTAGAGTTCAGTTATCACGGCGAAGTTAGAATTCCCGTTGAGAACATAAGCAATCTATTGGAGGCCGCTCACTCCTTGAAAATATGCGGTCTTATGGAGATCGACGGtctcgacgagaacgacgctATTATAAGCACGAAAGACGCGAGTGAGGACAACGCGGATTCTCTGGCCGATTTCAATGACTCCGATGGTAAAGGATCCGAGCAAATGGACGATGCAGTCGCGAGCAGAGAGGACGAAAAGAGCTCTGAAACAATAGACAATCGTCACGGCGTCGTATCCGTcaacaaaaagagaaaacggcGGAAAGACTCGTTGAAACGGGAATACAACGACGACATGCTCGTATCGGCGATAAACGACCTGAGGTCGGGTCAGACGCTCATTGAAgcggcgacgaaaaataatataccaCGATCAACGCTGTACATGAGGGCCAAAGCGTTGGGAATACAATTGAGCGCGTCGCGTAACGAGTATCCGCCGGAATGCATGAAAGCCGCGATCGAAGCGGTGGTCGGAGGTCTGAGCTTGCAGCAAGCTTCGGATAAATTCGACATACCGAAAACCGTTCTCTGGCGAAGAATACAGAAGGAAGGCTATCAGATATTGCGCACAGAGATGAAACGTTCTTACGGCTCGGAGAAGCGCGAAGCGGCTGTAAAAGCACTGCAACGGGGTGAAAATCTCTCGAAAGTTGCGATGGAATTTCAGataccAAAGACGACGCTGTTCCGCGATAAAGCGAGACTCGTCGACGAGGGCAAATTGCCGGAGTCCTTctggaagaaaagaaaaaccggcGACGAGCATGTGAAGCGTTTGCGTCTCGAGGAAGCCGTGGCGGCGTGCAAAGGCGGAAGAATGTCGCAAGCAGCCGCATCGATGGCGTATCGAATACCAAAAACAACGATCTGGCGACGACTCCAACAGGAGGGAAAGAATTCGGAGCGCGCCGCAAGTTCGAAGGAAACGGGGCTCGAGGATGAAATCGACGACGACAAGTGCGAGCATCAAAATGCCGATTTCTCATTCTGCGAGGTATCCTCGGAAATTCCCATAACTTATATAGACGAGAACATACCGGAGAATTCTGTAATAATCCTGACGACCCAGGACGTCGACGGACTGAATCTCGAAGCGGGCAGACAAATAATCGTGAATCAAGAATCCGGACAGGAGTACGTTCGATGTGCGCTCAGCATAGGAGAAAACACGGATACAACCGACTACCAGCCAGCCGAGAGCTAG
- Protein Sequence
- MSSIGTCSQPPIEESYCFKWSDYQNHLSGVVRQLLEEECMVDVTLVAAGERIHAHRIVLCSCSTLFQELLSQVTDDHPTIILSDISAQDVRSIVEFSYHGEVRIPVENISNLLEAAHSLKICGLMEIDGLDENDAIISTKDASEDNADSLADFNDSDGKGSEQMDDAVASREDEKSSETIDNRHGVVSVNKKRKRRKDSLKREYNDDMLVSAINDLRSGQTLIEAATKNNIPRSTLYMRAKALGIQLSASRNEYPPECMKAAIEAVVGGLSLQQASDKFDIPKTVLWRRIQKEGYQILRTEMKRSYGSEKREAAVKALQRGENLSKVAMEFQIPKTTLFRDKARLVDEGKLPESFWKKRKTGDEHVKRLRLEEAVAACKGGRMSQAAASMAYRIPKTTIWRRLQQEGKNSERAASSKETGLEDEIDDDKCEHQNADFSFCEVSSEIPITYIDENIPENSVIILTTQDVDGLNLEAGRQIIVNQESGQEYVRCALSIGENTDTTDYQPAES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00397441;
- 90% Identity
- iTF_00397441;
- 80% Identity
- iTF_00841215;