Basic Information

Gene Symbol
ARID5B
Assembly
GCA_963924025.1
Location
OZ001253.1:1200104-1210191[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3e-23 5.9e-20 71.7 0.0 2 89 415 500 414 500 0.95

Sequence Information

Coding Sequence
ATGCACGAGAGCAACGACGATTTAGCGTTCCATTCGACGGTGCATCGGCCCGAGCTCGAGCCCTGTCGCGAGTGCCGCGCGAGGCCGTCGGAAATCAGAGATGAAAATGTGCTCGACCGTTGCTATGGCGATTCGCATCGAAGAGCCGTCGATTCGCCGGTACAAACGGAAAAGCCCGAATATTACCGGTCACAATGTTTCGCGGTCGCGAAAAGGGCGCGGGGCAGTTTCGGGCGGGCGAAGCTTCGGCCAACGACGGCGAGGAGCGAGAGGCATTTCCGCCCTCGCGGCGGACCGACCATGGGAGGAGAGCTCGCGCGAGAGGGCGAGCTCGCCAAACGGCACGGGCGAAGCGCGAACGGAGGGTCGCGACGGAGCTTCCAGGCTTCGGCGGCCGGGAGTTCGGCGAAGAGGGTTAACGACCGCACTCACCCGGCACTCATCAAGTCGAGAAACAAGAACGACGAACAGAGCTTCTTGAGAAAGCCAAATATGATAAACGTAATTCGACGCAAGCGGAGCTGGGTGGACCGCGAAGTAGAAAGGAAGCCCTATGGCAATgACGAGGTATTGACGATATCGGAGAAAGTGGTCGTGCGCGTTCACGACCTAGTGACTTGGCTATCGCCGTCGGTCGAGTGGTCCTGGGGTCGAGAGATCTCGATACCCCAGTCCGTCGGAAAATCGTCCTCGGACGGCGTTGGCTCGCCGAAATACGATGGATCGTATCCGCAGGTGCTCACGGACCCCGGCATCGACTTCACGGACGTCGACAAGCAACAGAAGGAGTTCGAGAGCAATCGCACGCCGACGAAGAAGGAGGACAGCTTCTCGTCGCAGCCGCgcgtcgtcgttctctcgtACCCGAGGTACTGCCGCTATCGGGCGTTACTGCGAAGGCTCGAGGGCGCCGAACCGTCGTGGCTGTGCTCGTCGGTCGCGGCGGCCCTCGGCGGATTCACCGCGCTCCCCGGAACGAAAGTTCTCTTCTGCAGGGACACGTTCGACTATCCGGATCTCGAGACTCACGAACTTCTGTGCAATCACCTAGCGCCAAAGCTCAAAGGGAGGCCGAGAAGGAAGCGCAAAAAGCGCAGCGTGTCGCCCGGCGAGtcgagcaacgagagcgaggccTCGGTCGCCTCGACGTCGAGAGGGGCATCGACGACCGCGAGCCTCGTGCCCGCGCTCCGGCCGCCCTCGTCGGGGGTTCGTCGCAGCGAGAGAAACACGAGCGCCGAGGAGAAGAGGTTCCTCACGGACGTGCACGGTTTCATGAGCTCGCGGGGCACGCCGGTCGGAAAGATGCCTCTGCTGGGCTACAGACAGATCGATCTCTTCCTATTTTATACAAAAGTCCAGAAGTTCGGCGGCTACGACACCGTGAGCGCCGGACGTCTCTGGAAAACGATTTACGACGACATAGGCGGAAACACAGGGTCGACGAGCGCGGCGACGATAACGCGAAGACACTACGAGAGATTACTGCTGCCATACGAGAGGCATCAGAAGGGCGAGGAGACGAAGGTGAGGCCCGCGCACGGTAGGCGAACGAAGTCCAGCAGCATGTCCGACGACTCGACCGAGGCCAAGCCGGAAGTCGGAAGGACTTGCGCGTCGGAGACGCCGCCGCCGATGGAAGCGCCGACGGCCGCTTCGCCGGTTCCGCCGGTGCCGTCGATATTATCCTCATCGCCTTTCCTACCCGGCGACAAGCCAAAGACTGAGGGCGGCAAGACATCGTCCCTTCGTAGTGTTAGAGTCAAGCCCGAGCGTCTGAAGTCGCTGAGCACAATAATAGCGAACAGCGCGACGGTCGTGAGTCCGAACGGTCAGCAACTGCCGAGCCCGAGTCCGCCGCcgtcgtcgaattcgtcgacgacgccgagCACGCCGAGCACGACGccgtcgacgacgccgacgagcGTCGGGGCCGTCGGCCAGAGCGTCCTCGAGCGCCAGCTCAACAGCCCGCTTATATCGCACCAGTTGCCGCCGTCCTCGCCGCCGCCCTGCTCGCCGGTGAGCGCCGCGAACGCTACCGTCGTCACGCTGACGCCGCCGCCGGAGAGGGACCTGAAGGAGATCAAGCTCGACCCCAAAGCCGCGACGCTACTGGCCCAGGGCAAGGAGAACATCCCCCTGTTCGGCGAGAAGCCCATCTTCGCCGAGAAGGCCCTCGTCCCGCCGAAGTCGCCGGAAGTCATAGATCTCGAGCTCGAGAACGACGCGAGCCGCGACAAGATCGTCATACCGAGCTTCAAGAAGCGGAAGTTGGAGATCCTCCGCGAGGGCGGCCTCGAGGTCACGGCCGTCGAGCTCGAGTCGCGACCGAGCGTCATCCAAGCGACGATCATTCCCGTCTCCGCCGCCTCGCCCTTGACCTTGAAGAGCGACGAGCGAACCTCCGCCCCGCCGCCGGTCGCGCCGACGACGAATTCCGCGCCGAAACTCATCTCCGTCACGGTCACGCCCGACATCGGCCACATGCTGCCCTCGCCGCACGAGCATCGATCCGGCGCGCCGAGTCCCGCGCGAAACCCGACGACCAATCACAATCATCAAACCTTCAATCAGACCAGCCCCGTCAACGGCACGAGCAGCCGCGTCATAAACGTCGGCAGTCCCAACAACGCGAGTCTTCTCCAGCTCTACGCCAACTCTCTGCCGTCCAGCGCTTCGCCCTCGCCGCCGATCGCTCGTTTCGCCACGCCGAACGAGAGGCTTTCCGCCCCGCCCAAGGTCACCCAATCGCGATCGATATTCGCTCACAACGAGAGGACCGTCTACGGCAATCCCAAGGACATTCTCATACCTTCGAAGTACCATCATCATCACCAGCAGCACAATCGCAATTCGATAGTTCAGCAGCCAATCGCCGCGCCGCAAGCGACCGCGATACTCGATCTCACGCAGAAGCAATCCGAGCGCTCCTTCGCCCGGCCCAATCTCGAGATCGTCCGCGTGCCCGTCGTGCCCCGACCGAATCCACTGAATCTCGAGATGAAGAGCCCCCCGACGAAGGCGAAGCTTCCCTTCACCGGCTATCCCGGCATGCTCGACAGCCGAACCATGGCCTCGAATAATCTCGAGATCACCCTCGTCAATCCCAAACATCGCGCGCCGAGCGCGGGCCAGGCTCGCCAACCCTCGCCCAGCCCGCCCTCCGCCAGGCTCGCCGGAAATCACACGCAGAGGCGCAATCAGAACGGCAAATTCCCGGCGAGATCCGAACCGATCGCCACGACCTACGCCCCGCGCAAGCCTAGTCAGCAGGTCATCCCGAACGTGCCGAATCTTCACGGCCTCAACAGCGCCGCCTACGCCGCGAGAATCGTCAATCCCCAGCATCAGATCcagcagcaccagcagcaACACATGTACGTCGATCGCAGAAAAACGACGACTAATTCGGTTCATAATCAGCGCCGGaccagcgagagcgagaaagccaATGTCGGGCAGCAGCTTCAGCAGCACGTTCAGCAGGTCAAGGTCAACGCGAACCAGCGACAGGACTTGGCCCGGCGACACAGCGTTCCCAACAGCCTCGCTTCCGGATTTGCGCCCCCTGCGAACCAACCGAACTCCTTCGCGCAAATGCCTCCCAGCGCCACCGGCAAGTTCGTGCCGATGTTGGATCCGCTCTATTACTCGGCCTTCTACAACGGCCTCTTTCCCGCGCCAATACCCAACGCCGCCGCGCCCTACGTGCCCCCCGAATTCAGCGCTTACTACAAGGAACTGCTCGCCTCGTCGCAACCGAGGATCGCCGTGGCCGGACAGCATCAACCCGCCGTACCGACGTCCAAGTAG
Protein Sequence
MHESNDDLAFHSTVHRPELEPCRECRARPSEIRDENVLDRCYGDSHRRAVDSPVQTEKPEYYRSQCFAVAKRARGSFGRAKLRPTTARSERHFRPRGGPTMGGELAREGELAKRHGRSANGGSRRSFQASAAGSSAKRVNDRTHPALIKSRNKNDEQSFLRKPNMINVIRRKRSWVDREVERKPYGNDEVLTISEKVVVRVHDLVTWLSPSVEWSWGREISIPQSVGKSSSDGVGSPKYDGSYPQVLTDPGIDFTDVDKQQKEFESNRTPTKKEDSFSSQPRVVVLSYPRYCRYRALLRRLEGAEPSWLCSSVAAALGGFTALPGTKVLFCRDTFDYPDLETHELLCNHLAPKLKGRPRRKRKKRSVSPGESSNESEASVASTSRGASTTASLVPALRPPSSGVRRSERNTSAEEKRFLTDVHGFMSSRGTPVGKMPLLGYRQIDLFLFYTKVQKFGGYDTVSAGRLWKTIYDDIGGNTGSTSAATITRRHYERLLLPYERHQKGEETKVRPAHGRRTKSSSMSDDSTEAKPEVGRTCASETPPPMEAPTAASPVPPVPSILSSSPFLPGDKPKTEGGKTSSLRSVRVKPERLKSLSTIIANSATVVSPNGQQLPSPSPPPSSNSSTTPSTPSTTPSTTPTSVGAVGQSVLERQLNSPLISHQLPPSSPPPCSPVSAANATVVTLTPPPERDLKEIKLDPKAATLLAQGKENIPLFGEKPIFAEKALVPPKSPEVIDLELENDASRDKIVIPSFKKRKLEILREGGLEVTAVELESRPSVIQATIIPVSAASPLTLKSDERTSAPPPVAPTTNSAPKLISVTVTPDIGHMLPSPHEHRSGAPSPARNPTTNHNHQTFNQTSPVNGTSSRVINVGSPNNASLLQLYANSLPSSASPSPPIARFATPNERLSAPPKVTQSRSIFAHNERTVYGNPKDILIPSKYHHHHQQHNRNSIVQQPIAAPQATAILDLTQKQSERSFARPNLEIVRVPVVPRPNPLNLEMKSPPTKAKLPFTGYPGMLDSRTMASNNLEITLVNPKHRAPSAGQARQPSPSPPSARLAGNHTQRRNQNGKFPARSEPIATTYAPRKPSQQVIPNVPNLHGLNSAAYAARIVNPQHQIQQHQQQHMYVDRRKTTTNSVHNQRRTSESEKANVGQQLQQHVQQVKVNANQRQDLARRHSVPNSLASGFAPPANQPNSFAQMPPSATGKFVPMLDPLYYSAFYNGLFPAPIPNAAAPYVPPEFSAYYKELLASSQPRIAVAGQHQPAVPTSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-