maker-scaffold_242-snap-gene-1.3-mRNA-1
Basic Information
- Insect
- Ischnura elegans
- Gene Symbol
- kn
- Assembly
- None
- Location
- scaffold:87500-98922[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.9e-85 4.2e-81 273.5 0.3 246 366 29 149 24 151 0.97 2 2 1.6 1.4e+04 -5.6 24.4 447 560 149 257 148 271 0.64
Sequence Information
- Coding Sequence
- ATGGCAAACTCTTTCTCTATCTATCCCCGCCTCTCGCTGACTCACCCATTTCCGCCCTCCACTCTAACTGTAGGGTTGTACCCTCCCATTGCCGTAGCCACGCCGTGCATCAAGGCGATCAGCCCGAGCGAGGGGTGGACATCCGGCGGCTCCACCGTCATCATCATCGGCGACAACTTCTTCGATGGCCTGCAGGTCGTCTTCGGAACCATGCTGGTTTGGAGCGAGCTCATCACGTCTCACGCAATACGTGTGCAAACTCCTCCACGGCATATTCCCGGAGTTGTAGAAGTCACGTTATCTTACAAGTCAAAGCAGTTCTGCAAAGGGGCGCCTGGAAGATTCGTTTATGTCTCTCTCAACGAACCTACAATAGACTACGGCTTTCAGCGTTTGCAAAAACTTATTCCACGGCATCCAGGGGACCCGGAGAAACTTCCGAAGGAGTACGCTAGAGGGCAGCAGAGCGCCTCTCCGCGCGGCGGCTACGCTTCCTCGGCCGCCTCCACGCCGCACTCCTCCTCCACTGCAGCCGCCGCCCCCTACACAACCACGTCCGCCTCCTCCTCCTCCGCCGCCGCCAACTACGCCCCCTCGCCCGCCTCCTCGACCGCAGCGCCAGTCACCTCGCCGGCATCGGGAGGAAGCTTCTTCAACACATCGCTGACGTCTCCTAATTCATATGGCGGTTCTCAATACCAGTTCAGCCAACTAGCGGCGAAAGAAAAAAGTGCCTTCGCTCCGTTCGCGCCTGCGCCAGCGCACTCTTCCGCGCACACCCACACTGGATTTCAGACGACACCCACCAGCTGGCACCACCTGACAGAGATGGGGAGTATTGGTGGAGCGGCCTTCAAGACCAAAAGCTCTGACTCGCATCCATCACCTAGAGATGCCGCAGCGAGAAGGTTCCCATTTTTGGACGACCCAAAACACATGAGCAGATCGCGTCTCCTCGATTGCTCTTCTCCGATACCTTCCGCAACACCAACTACAAAACTGCCCCCATGA
- Protein Sequence
- MANSFSIYPRLSLTHPFPPSTLTVGLYPPIAVATPCIKAISPSEGWTSGGSTVIIIGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEYARGQQSASPRGGYASSAASTPHSSSTAAAAPYTTTSASSSSAAANYAPSPASSTAAPVTSPASGGSFFNTSLTSPNSYGGSQYQFSQLAAKEKSAFAPFAPAPAHSSAHTHTGFQTTPTSWHHLTEMGSIGGAAFKTKSSDSHPSPRDAAARRFPFLDDPKHMSRSRLLDCSSPIPSATPTTKLPP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -