Ipod020952.1
Basic Information
- Insect
- Iphiclides podalirius
- Gene Symbol
- ZNF131
- Assembly
- GCA_933534255.1
- Location
- OW152841.1:7699463-7705001[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.00028 0.023 15.4 0.9 2 21 169 188 168 189 0.93 2 18 2.6 2.2e+02 2.9 0.1 3 23 197 217 196 217 0.81 3 18 0.015 1.3 9.9 1.1 1 23 222 245 222 245 0.96 4 18 8.6e-06 0.00072 20.1 1.4 2 23 251 272 250 272 0.95 5 18 0.086 7.2 7.5 3.0 2 21 276 295 275 296 0.94 6 18 0.001 0.084 13.6 2.0 2 23 329 351 328 351 0.95 7 18 0.32 27 5.7 0.2 3 23 359 378 358 378 0.93 8 18 0.011 0.95 10.3 0.1 1 23 384 406 384 406 0.98 9 18 0.0089 0.75 10.6 1.2 1 23 412 435 412 435 0.95 10 18 0.019 1.6 9.6 0.5 1 23 443 466 443 466 0.93 11 18 0.00057 0.047 14.4 3.2 1 23 475 497 475 497 0.98 12 18 0.00025 0.021 15.5 0.8 2 22 645 665 644 665 0.94 13 18 0.28 23 5.9 2.2 3 23 671 690 670 691 0.94 14 18 1 84 4.2 1.0 1 17 696 712 696 713 0.90 15 18 0.0001 0.0085 16.7 2.3 1 23 754 777 754 777 0.95 16 18 0.028 2.4 9.1 1.3 1 23 783 805 783 805 0.93 17 18 0.33 28 5.7 0.4 1 23 839 862 839 862 0.90 18 18 0.021 1.7 9.5 2.1 1 19 870 888 870 893 0.89
Sequence Information
- Coding Sequence
- ATGAGCCGGCAAGTAGATATCAAGGCTATAGTTTCCCACGTTGTGAGAGGAGATGGTATAAATAGATGTCGAATATGTATGGGAGACACGACGGAAGGTCAAGTATTTCTTGGCGATACTGTAATGCTTGATGGAGAACAGCCCGTGACGTTGTCAGAACTATTGGAGACTATAACAGGAGTTGAGATGCCGTTGTCAGAAGATCTGCCAGTCAGCCTGTGCTCGACTTGCTCGGTGTCGGCACTGAGCGCGGCCGACTTTCGGACAGTGTGTCGGCAGGCCGCCCACAAGTGGGCCGCCATGCTGCAATTGCTGGGCACCCTGCCCGAGGACGGGAACGAGTGCAAGGCACTGCTCGCCGTCATGGAGTCCGACCAAATGGTCATGTTTGAAGAATACGAGAGCGTCACGAGTGCCGAGTCGGCCGCGACGAGGCTCACACTCAGACTGAATCCCAAAGAGAAGGAGACAACCGCTAACCGACCACCGACAGGCTACCGCTGCCAATGCCCCGACTGCGGCAAGAAGTTCCCGTACGTGCAGCAACTGTACCAGCACCTGAAGGAGTCAACGGACCTAAAGCGCGCGTGCTACGTTTGCGCGAAGATCATGAGCCGCGACGAGCTGGTTTCCCACCTGCGGACGGATCACAACCGGAACCCGCACGACTGCAAAGAGTGCCCGGCGCTGCTGCCCTCCCGCGGGCACTACGAGCAGCACATGAGGAAGGCGCACGCCCCGGGCGCCTGCACCTGCGGCGACTGCGGCCGCAGCTTCCGAACCTCGAACGCCTTCCGCGCACACCTGTCCGTGCACACGGCTAAGACGTGCCCCGCCTGCAAACGGCCGTTCCGCAACCAGACCTGCTATCTACACCACGTGCGCCAGTGCTGCGAATTGGGCGGCGGAAAGGGCGCCACCGTCGTGCAGAGCGGTGGCCGCCGGGTCAAAGTCGGGCTGCGCGGGAGGGCGGACAAGGAGTGCGTTTGCGACTACTGCGGCAAACGCTTCGCCGGCAAGAAGTTCGTATGCGCCCACATCCAGATCGTCCACACGAAAAGCACCCACCGGCCGTGCGCGTACTGCGGCAAGTCGCTCGCGGCCGCCCACATGACGGAGCACGTCAAAAAGCACGAGACGGTCAGCGCCTTCACTTGCGAGCTGTGCGGCGTCGTGCTGAGGACGAGGCTCGGTTACGTTCAGCACTTGAGGCTCCACAGCGGCGAGCGGCCGTACGCGTGCCGCCACTGCGGGGAGACCTTCTCGGCGTCGTCCAGACGCTCGGAGCACGTGCGGAAGGCCCACGGCCCTGAGGCGGTGCCGAAGCACGCGTGCGATCGGTGCCCAGCTAGATTCAGGCTGCCGTACCGTCTGAAGAAGCACGTCGCGTCCGTACACGGCACCGGGCAGCGGGATCCCAGCTTCGAGTGCAGCGAGTGCGGCGAGCGGTTCGGCAGCTGCCGCGGCCTCCTGCACCACAGTAGGACGCACCAGCGCGCAGCACCGGCTCGGGTGGCAGTGCAGAAAAAGAGGCAGATGGAGTGCCGCGTGTACAGCGAGCCAACAAGAAACTCGACCGGTCCGGATGGGAACCAGTTGACTTCAGTGGAGGAGGCGGCGGACTTTCCGCACGGCGTTTGCTCCAACTGCACAAAGATGGCACTCGCCGCGATGCATTTCCGTAAGGTCTGCCTCGAGTCGGCCAAGCAATGGGCACGCGTTGCCTCCCAACTCGCGCACGCCTCCGCGCCCGGTCCACGAGACAGGGCGCTTTTCGTCTTCTACGACGACACGAATATCAAAGTGCTAAGGGAGCGCAACCAAGTGGTGACAGTAGCCCTCGCCGTAAACAGACTGAACCAAAGGCTCCGACCGTCCAGCGCGAGCAAAGCTATCCCCAAGGTGAGGAAACCGCGCAAAGGCAAGCGCTGGCGGTGCCAAGACTGCGGCAAGGAGTTCACGCTGCCGTGCTACTTGAACCAGCACCTCAAGATGACGATGAAGAGGGCCTGCACCCACTGCGGCGCGATCGTCAGCAGGGAGAAGCTGCAACAGCACCTGCTGAGGCACCACGGTCAGCGCCTGTTCCGCTGCAAGACCTGCCACCAGCTCTTCCACCGCGAACGGGAGCTGACGAGCACAACGAAACCGCCCACGGCGCTCAGTCGCACGCGTGTCGCCTCGAGCTTCGAGAACCGCCGCTGCTACAAGTACCACGTCGGCCGCTGCGGGGGACCTAAGCTGCAGCCGGGGTCAGCCTACGAGTGCCACGACTGCGGCAGCAGATACTCTAAGAAGGAGTCGCTGAGGACCCACATCGAGCAGAAGCATTTAAACGTGTTGCCGTTCGTCTGCCAGGAGTGCGGCAAGCGGAGCTCGACCCTGGGCCACCACCGAGCGCACGAGGCGATACACTTGCCGAGGAGGAAGGTGTACCAGTGCTACTGCGGCGCCAAGCTGCTCACCGAGCTCGGCTTCAGCCTGCACAGCAGGATCCATTCGGGGGAGAGGCCATACGAGTGCCCAGAGTGCGGGGACCGGTTCCTCTCCTCCTCCAGACGGCTGGACCACATAAAGCGGCGGCACACGAGCCTGAAAGACATGCCCCACCCGTGCAAGCAGTGCCCGGCCACGTTCCTCAGGCCCTCGCAGCTGAAGAAGCACTGCCTGGTCATCCACGGTGTTTCCAGCTGA
- Protein Sequence
- MSRQVDIKAIVSHVVRGDGINRCRICMGDTTEGQVFLGDTVMLDGEQPVTLSELLETITGVEMPLSEDLPVSLCSTCSVSALSAADFRTVCRQAAHKWAAMLQLLGTLPEDGNECKALLAVMESDQMVMFEEYESVTSAESAATRLTLRLNPKEKETTANRPPTGYRCQCPDCGKKFPYVQQLYQHLKESTDLKRACYVCAKIMSRDELVSHLRTDHNRNPHDCKECPALLPSRGHYEQHMRKAHAPGACTCGDCGRSFRTSNAFRAHLSVHTAKTCPACKRPFRNQTCYLHHVRQCCELGGGKGATVVQSGGRRVKVGLRGRADKECVCDYCGKRFAGKKFVCAHIQIVHTKSTHRPCAYCGKSLAAAHMTEHVKKHETVSAFTCELCGVVLRTRLGYVQHLRLHSGERPYACRHCGETFSASSRRSEHVRKAHGPEAVPKHACDRCPARFRLPYRLKKHVASVHGTGQRDPSFECSECGERFGSCRGLLHHSRTHQRAAPARVAVQKKRQMECRVYSEPTRNSTGPDGNQLTSVEEAADFPHGVCSNCTKMALAAMHFRKVCLESAKQWARVASQLAHASAPGPRDRALFVFYDDTNIKVLRERNQVVTVALAVNRLNQRLRPSSASKAIPKVRKPRKGKRWRCQDCGKEFTLPCYLNQHLKMTMKRACTHCGAIVSREKLQQHLLRHHGQRLFRCKTCHQLFHRERELTSTTKPPTALSRTRVASSFENRRCYKYHVGRCGGPKLQPGSAYECHDCGSRYSKKESLRTHIEQKHLNVLPFVCQECGKRSSTLGHHRAHEAIHLPRRKVYQCYCGAKLLTELGFSLHSRIHSGERPYECPECGDRFLSSSRRLDHIKRRHTSLKDMPHPCKQCPATFLRPSQLKKHCLVIHGVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -