Ipod014340.1
Basic Information
- Insect
- Iphiclides podalirius
- Gene Symbol
- Lip1
- Assembly
- GCA_933534255.1
- Location
- OW152830.1:1325930-1331118[-]
Transcription Factor Domain
- TF Family
- CG-1
- Domain
- CG-1 domain
- PFAM
- PF03859
- TF Group
- Unclassified Structure
- Description
- CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.7e-18 1.5e-14 54.0 0.4 40 85 2 46 1 56 0.90
Sequence Information
- Coding Sequence
- ATGCTGCTGTACAGTCGCAAAAAAGTGCGCTACAGGCGCGACGGATACTGCTGGAAGAAACGGAAAGACGGAAAGACCACCCGAGAAGACCACATGAAACTGAAGGTGCAGGGCACAGAGCTAATAACGGGATCGATCGAAGTTGAAAAGGCGGTGGACGCACtacttcccgaagatggcaggtttaattttatgcagctggctgataaatatggccatccggcgatcgaacatgacgtcgtgacagaggacggatacatactcaaattatttcacataccaggagataaaggaagacctgttctgttaatgcatggcattgcggactctgcggacgtctggattatcagaggaaacctatcgttagcagtcgccttagctggttccggatacgacctttggtttggcaacatacggggtaacagatactctcggcgtcacgtcagtctcaaccccgatcaagatgatcagttctggaactttagtttccacgaaaacggccattacgacctgcctgcaataatagatacggtgctcgaggaaacaggttcggccacgctaaacgctattgggttttcacaaggcaacactatattctacgtgctgtgctcaaccagaccggaatacaattcgaagataaacgtaatgatggcattagcacccatatgctacctgcagaaTGTGCCACCGCCTCTTTCGATACTAATAAGCATTGCACCGTTGCTGTACAAGTTCTTCACTGACCTGGGTATCAACGAGATCGGTAACGATCATTCGCTATTAAACACATACGAGAAAATCATTTGCACGCGCCCTCAAATCGGTTACGATCTCTGCGTCGAAGGCCTAATGTTTCCAATCACTGGATACGACAGCGAAGAACTCGGGCCCGACTTCGTTCCCGTTCTCGTTGGCCACTTCCCCACAAGCACCGCCACGAAGGATTTATATCACTTAGCCCAAGTCGGATACCGGCGCGCATTTGCACAATTCGACTATGGTAATGCGGGGAACATCGTAAAATATAACTCTACACTGCCCCCCGAGTACGACTTGAGTTTGGTAACTACTAAAATAGTTTTTTACGTCGGCCTGAACGATCGTCTCTCCACGGTAGCCGATGTTGAGATTTTGAAGTCGCAGCTGCCAAATGTCGTCCGTTATATTGTGAGTCCGCGTTTGCAGTGCAACCATGTTGACGACGTTTTGGGTGCACATATGAATTATAACATATTCCCTTACATATACGACGTTTTAGAAACATATTAA
- Protein Sequence
- MLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTELITGSIEVEKAVDALLPEDGRFNFMQLADKYGHPAIEHDVVTEDGYILKLFHIPGDKGRPVLLMHGIADSADVWIIRGNLSLAVALAGSGYDLWFGNIRGNRYSRRHVSLNPDQDDQFWNFSFHENGHYDLPAIIDTVLEETGSATLNAIGFSQGNTIFYVLCSTRPEYNSKINVMMALAPICYLQNVPPPLSILISIAPLLYKFFTDLGINEIGNDHSLLNTYEKIICTRPQIGYDLCVEGLMFPITGYDSEELGPDFVPVLVGHFPTSTATKDLYHLAQVGYRRAFAQFDYGNAGNIVKYNSTLPPEYDLSLVTTKIVFYVGLNDRLSTVADVEILKSQLPNVVRYIVSPRLQCNHVDDVLGAHMNYNIFPYIYDVLETY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00855893;
- 90% Identity
- -
- 80% Identity
- -