Ipod002483.1
Basic Information
- Insect
- Iphiclides podalirius
- Gene Symbol
- TEAD1
- Assembly
- GCA_933534255.1
- Location
- OW152815.1:6452699-6461362[-]
Transcription Factor Domain
- TF Family
- TEA
- Domain
- TEA domain
- PFAM
- PF01285
- TF Group
- Helix-turn-helix
- Description
- The TEA domain is a DNA-binding region of about 66 to 68 amino acids that has been named after the two proteins that originally defined the domain: TEF-1 and AbaA. The TEA domain is located toward the N terminus of eukaryotic transcription factors of the TEA/ATTS family. It shows a three-helix bundle with a homeodomain fold [3, 1]. Two α-helices are nearly anti-parallel and pack on either side of the third one, which is the DNA-recognition helix of the TEA domain. Phosphorylation of one or both of the two conserved serines found on the DNA-binding surface could interfere with DNA-binding activity, by introducing electrostatic repulsion and/or steric hindrance, and help regulate the transcription factor activity of the proteins [2, 1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-17 1.6e-13 51.0 1.2 35 66 4 35 2 37 0.94
Sequence Information
- Coding Sequence
- ATGACTGTATCGGGAAGGAACGAGCTCATAGCGAGATACATTAAGCTGAGGACTGGAAAAACACGCACGAGGAAACAAGTCTCCTCCCACATACAGGTGCTGGCGAGGCGGAAACTGCGCGAGATTCAGGCCAAACTCAAAGTGGACGGTGGTGTGATGAAAGAAAAGGCGATGCAGTCTATGACCGCTCTGTCGAGCGCGCAGATTGTGGCCGGTTTGCCGCATCCGGCTTACCATCATACGCAATTTTGGCAGCCCGGTCTACAAGCTGGAACTTCACAAGACGTGAAGCCGTTCCCCGGGGCCGGCTACAAGGGCGTGGGCGGCGTGGGTGTGGGCGTGGGGGTGGGAGTGGGCGTGGGCGGCGCGGCGGACGTGGCGCCGCCGCCGCCGTGGGAGGGGCGCGCGATCGCCACGCACAAGCTTCGCCTCGTCGAGTTCTCCGCGTTCGTCGAGCACCCGAGAGACGCCGACACGTATCCCCCAAGTACAGCGCCGGCGCAACACCTCTTCGTCCACATAGGGGGCACCGTCACGTACGCGGATCCCTTATTAGAATCGGTAGACGTGCAGCAAATAAACGACAAGTTCCCCGAGAAGAAGGGCGGCTTGAAAGAGCTGTACGAGAAGGGGCCAAGGAACGCCTTCTTCCTCGTCAAGTTCTGGGCTGACCTGAACACCAACAACCTTGACGATCCCGGCGCTTTCTACGGCGTCACTAGTGTGTACGAGAGCAACGAGAACATGACGATAACGTGCAGCACGAAGGTGTGCTCGTTCGGCAAGCAGGTGGTGGAGAAGGTGGAGACGGAGTACGCGAGGTTCGAGGGGGGCCGCTTCGTGTACCGCATCCAGCGCTCGCCCATGTGCGAGTACATGGTCAACTTCATCCACAAGCTGAAGCACCTGCCCGAGAAGTACATGATGAACAGCGTCCTCGAGAACTTCACCATACTGCAGGTGGTGTCGAACAGAGATACGCAGGAGACGCTTTTGTGCGCGGCGTTCGTTTTCGAAGTGTCGAACAGCGAGCACGGGGCGCAGCACCACATCTACAGGCTCGTCAAAGACTGA
- Protein Sequence
- MTVSGRNELIARYIKLRTGKTRTRKQVSSHIQVLARRKLREIQAKLKVDGGVMKEKAMQSMTALSSAQIVAGLPHPAYHHTQFWQPGLQAGTSQDVKPFPGAGYKGVGGVGVGVGVGVGVGGAADVAPPPPWEGRAIATHKLRLVEFSAFVEHPRDADTYPPSTAPAQHLFVHIGGTVTYADPLLESVDVQQINDKFPEKKGGLKELYEKGPRNAFFLVKFWADLNTNNLDDPGAFYGVTSVYESNENMTITCSTKVCSFGKQVVEKVETEYARFEGGRFVYRIQRSPMCEYMVNFIHKLKHLPEKYMMNSVLENFTILQVVSNRDTQETLLCAAFVFEVSNSEHGAQHHIYRLVKD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01018545;
- 90% Identity
- iTF_01142369; iTF_01155171; iTF_00195142; iTF_00922855; iTF_01402695; iTF_00957928; iTF_01141646; iTF_00249679; iTF_01156431; iTF_01495024; iTF_01130006; iTF_01148790; iTF_01496566; iTF_00855866; iTF_01139579; iTF_00197343; iTF_01143808; iTF_01148064;
- 80% Identity
- -