Basic Information

Gene Symbol
osa
Assembly
GCA_933534255.1
Location
OW152833.1:4186160-4203843[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1e-25 2.7e-22 79.2 0.0 2 89 340 424 339 424 0.94

Sequence Information

Coding Sequence
ATGCGTCGCCCGCGTGCGTCGCGGGCGAACACACTTATACCTACCTACACGGATGCGGTAAAGTGCAGCGGGGATTCGCGAGTGCCGTACGGCGGCGGGGCGAAAGCGAAAGTGATCCGGGTGCCCTCTCCTCCACTCTCCCGCCCCCGGCTGATGCGATGCACGCGGCCCGGCTTAGGCGCTCCCTCGTTAACTGCGTTATTCAAATTGGTGCACGCCGCCTCTGTGTGTGCAAAATGTGATCGATCACACACACACGCACACAAACACACGTCCGTGCCACGTTCTGCCGTTTACACTCTGGAGCGCAGTTTAATTCAAGCTCGCTGCGCGCTTGTAACACGCACCCAGAACGTTCCGATGCCGCCGCGGCCGTCGTCCTCGCTGTCGGACGGCGGTGGGCCTGCGGTGAGGGGCGTCGGCCCCGCCGGGCCCGGAGCGCCCGGCGCGATGGTGGCGCAGCCCTACCACCACGCGTACAAGGCGGCCCACTACCCGCCGCAGCCCTACGGCTACCCGCCGAGGAACCACCACCCGTACCCGTACGCGGGCTACAGGCCCGCGCCCCCGCCCCATCCGCCCCAGCACTATCCACCGCTCAAGGGCGCGCGGCACATGGGCCCGCCGGGCGAGGCGATGCCGCCGCCGGTGGCGCCGGGCGAGCAAGACAACAACGGCCCCGCTGCGCCCgccaccgcgctcgtcaccaccggccccgacggggcgcccctcgacgagggcagccagcagagcacgctcagcaacgcctccgcagCATCGGGGGAGGAGCAGTGCGGCTCGAAGGGTCGCAAGGAGGTGGGCGCCGGCAGCGCTGCCCCTTCGCCGTCGCCCGGCGGCGGCTCCCACTCGTCGATGCACGACGACTACGACGCGCCGGCCGCCTGGCCAAGGCCCCCCTCCAGCCCCGTGTTTAACAGTCACATACCGCCGGAGTCCTACAGATCAAAGaagtcggactcgctgggcaagctgtacgagatggacgacgcgcccgagaggcggggctgggtggagaggctgctcgcgttcatggaggagaggcgcaccccgatcgccgcctgccccaccatctccaagcagccgctcgacctctaccgcctctacctgctggtgcgcgaccgcggcggcttcgtcgaggtgacgaagaacaagacgtggaaggacatagcgggcctgctgggcatcggcgcctcgtcctcggccgcgtacacgctgcgcaagcactacacgaagaacctgctcgcctacgagtgccacttcgaccgcggcggaatcgacccccagcccatcatcaaccaggtcgaggcgtccaccaagaagaagggcggcAAGTCCAACAACACCGCCAGCGCCGGGTCGTCCAACTCGCAGGAGTCGTTCCCGGGCGGCGGCACGCCGGCCGCCGGCGGCGCCATGGACGGCTACGGCGCGCAGTACGCCGGCTACCCGCCGCCCTCCAGCCAGCCGCAGGGCGGCGGGCCTGGCGGCGACAACCTCGCCGCCTCCAACCCCTTCGACGAGCCGCCGGGGCCGCGCAGACCCCCAGGTTACCAACAAGGTTACGGGTACGAATATGGATCTCCATACCCATCAAATAGGCCTGTTTATCCTCCGTATGGGCCCGAGGGTGACAGGGCGTACGGCACCGGCGAGTACCGGTACGGCGGCTACGCGGGCGGGTACCGCGCGGGCGCCCCGCCGCCGGCCGGCACCCCGCCGCCCGCGCAGCCCTACCCGGACTACTACCGGCCGCAGCCGGCGCCGCACGCGCTGCCGCAGCACCCGCCCCACCCGCAGCACCCGCCCCACCCGCAGCACCCGCAGCACCCGCCGCACGCGCAGCACCCGCCGCACGCGCAGCACTCGCCGCACGCGCAGCAGCAGCCGCCCATCGAGATGTCGGGCGGTGCGCAGCAGTCGGTCGGTAACCTAATGAGCTCGCAGCTCGCGCGGCAGCTGGTGGCGCCGCTGCCGCCCAGCGCGCGCCCCTACTACGGCGGCGGCAAGGGGGGGGGCGCGGGCGGCGCGGGGGCGGGCGCGGGCGCGGCGGCGGCGGCGGGCGGCGCGGCGGGCGGCGGGCCGGCGGGCGCGCCGCGGCGCCACCCCGACTTCGCCAAGGGCGAGCCGTTCGCCGCGGGCGGCGCCCGCTTCCCGGCCGCGTGGGGCGGCGGCTTCGCGCGCTCGCCGGCGCCGCAGCCCGCCTGGCGGCCGCCGATGCCCGCCGCGCAGCCGCCGCCCTGGCCGCACCAGCCCTACCAGCCGCAGACGCCGGGCGGGCCGGCGTGGGGCGCGCCGAGGCCACCGCTGGAGCTGCCACCCGCCGCGCCGTCGCCCGGTTCGGTTCCGGGCGTAGGTGCTGGGCAGATCAAACGAGAGTTAACTTTCCCTCCCGAATGTGTGGAGGCGACAGTGCCGACCGGTGAAAAACGGCGGCGGCTTACCAAAGCCGATGTCGCACCCGTGGACGCGTGGCGCATCATGATGGCTCTTAAGTCTGGATTACTCGCGGAAACGTGTTGGGCCCTCGACATCCTGAACATTTTGCTCTTCGACGACAACTGTATAGGTTACTTCGGACTGCAGCACATGCCCGGTCTCCTGGATCTGCTGCTGGAACACTTCCATAGGAGTTTAAGCGACGTATTCGACGCGCCGATACCCGAGAACGAGCCGTGGTACGCGACGCCCACCGCGCCCGAACCTCCCGCCAAGGTGCGCCGAAGAGTGGAGCCGCCCGACCCCGGCGACGGCGTGCGTCTGCTCTCCGGCGAGAACTACACCTTCCAGTCGAGGAGGCGGCACCCGGTCGTGTACAAGAGCGACGACGACCTCTTCGCGCCCGACGACTGCGAGTCGGACGGCGAGCGCGTGGAGGACGTGCTCGAGCCGTGGCAGTTCGGCGGCGACTCGGCGGGCGCCGCGCACGTGGTGCCCTGCTTCCGCGGCGAGTTCCTGCCGCTGCCCTTCGTGCGCCTGCTGCCCGGCGAGCGGCCGCCGTCGCCGGCGCGCGCCTCGCCGCGCCCGCGCCCCGCGCCCGACGCGGCCGCGCCGCGCTCGCCCGACGCCGCCTCGCCGCCGCCGCCCGGCGCCGCCGGCGACGCCGACAACCTGGAGGCCGAGCCCATGGAGCTGGAGCCCGAGCGGCGGCCCGCGCTGCTCGTGCGCGACCCCGCCGGCgtgctcaagcggcggcgcctcgaggactacgaggacgagtgctacacgcgggacgaacccagtttgaaccttgtgaacgaaacgcgggacgcgctcgcgaaacggtgcatcgcgctctcgaatatcctgcgcggcctcacgttcgtgcccggcaacgaggcggagttctcccggtcgagcgcgttcctggcgctggcgggcaagctgctgctgctgcaccacgagcacgcgccgcgggcggcgagggcgcgcgcctacgagcgggcggcgcgcgacgaggccgacgtggaggcgtgctgctccagcctgcgcggcgagggcgagtggtggtgggacacgctggcgcagctgcgcgaggacgcgctcgtgtgctgcgccaacatcgcgggcagcgtggagctggcggggcagccggaggcggtggcgcggccgctgctggacgggctgctgcaCTGGAGCGTGTGCCCGGCGGCGGTGGCGGGCGACGCGCCGCCGGCGGCCGCCGCGGGCTCGCCGCTGTCGCCGCGCCGGCTCGCGCTCGAGGCGCTGTGCAAGCTGTGCGTGACGGACGCCAACGTGGACCTGGTGTTGGCGACGCCGCCGCGCGGGCGCGTGGCGCAGCTGTGCGCGGGTCTGGCGCGCGACCTGTGCCGGCCCGAGCGGCCGGTGGTGCGCGAGTTCGCCGTCAACATCCTGCACTACCTGGCGGGCGCGGGCGGCGCGGCGGCGCGCGAGGTGGCGCTGCACGCGCCCGCCGTGGCGCAGCTGGTGGCCTTCATCGAGCGCGCCGAGCACGCGGCGCTGGGCGTGGCCAACCAGCACGGCGTGGCGGCGCTGCGCGACAACCCCGACGCCATGGGCACCTCGCTCGACATGCTGCGCCGCGCGGCCGCCACGCTGCTGCGGCTGGCCGAGCACCCGGAGAACCGGCCGCTCATCCGTCGCCACGAGCGGCGCCTGCTCTCGCTCGTCATGAGCCAGATCCTCGACCAGAAGGTGGCCCACGAGCTGGCCGACGTGCTGTACCACTGCAGCCAGCGCAGCGACCTCGAGCCGCACCACGAACACTAG
Protein Sequence
MRRPRASRANTLIPTYTDAVKCSGDSRVPYGGGAKAKVIRVPSPPLSRPRLMRCTRPGLGAPSLTALFKLVHAASVCAKCDRSHTHAHKHTSVPRSAVYTLERSLIQARCALVTRTQNVPMPPRPSSSLSDGGGPAVRGVGPAGPGAPGAMVAQPYHHAYKAAHYPPQPYGYPPRNHHPYPYAGYRPAPPPHPPQHYPPLKGARHMGPPGEAMPPPVAPGEQDNNGPAAPATALVTTGPDGAPLDEGSQQSTLSNASAASGEEQCGSKGRKEVGAGSAAPSPSPGGGSHSSMHDDYDAPAAWPRPPSSPVFNSHIPPESYRSKKSDSLGKLYEMDDAPERRGWVERLLAFMEERRTPIAACPTISKQPLDLYRLYLLVRDRGGFVEVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAYECHFDRGGIDPQPIINQVEASTKKKGGKSNNTASAGSSNSQESFPGGGTPAAGGAMDGYGAQYAGYPPPSSQPQGGGPGGDNLAASNPFDEPPGPRRPPGYQQGYGYEYGSPYPSNRPVYPPYGPEGDRAYGTGEYRYGGYAGGYRAGAPPPAGTPPPAQPYPDYYRPQPAPHALPQHPPHPQHPPHPQHPQHPPHAQHPPHAQHSPHAQQQPPIEMSGGAQQSVGNLMSSQLARQLVAPLPPSARPYYGGGKGGGAGGAGAGAGAAAAAGGAAGGGPAGAPRRHPDFAKGEPFAAGGARFPAAWGGGFARSPAPQPAWRPPMPAAQPPPWPHQPYQPQTPGGPAWGAPRPPLELPPAAPSPGSVPGVGAGQIKRELTFPPECVEATVPTGEKRRRLTKADVAPVDAWRIMMALKSGLLAETCWALDILNILLFDDNCIGYFGLQHMPGLLDLLLEHFHRSLSDVFDAPIPENEPWYATPTAPEPPAKVRRRVEPPDPGDGVRLLSGENYTFQSRRRHPVVYKSDDDLFAPDDCESDGERVEDVLEPWQFGGDSAGAAHVVPCFRGEFLPLPFVRLLPGERPPSPARASPRPRPAPDAAAPRSPDAASPPPPGAAGDADNLEAEPMELEPERRPALLVRDPAGVLKRRRLEDYEDECYTRDEPSLNLVNETRDALAKRCIALSNILRGLTFVPGNEAEFSRSSAFLALAGKLLLLHHEHAPRAARARAYERAARDEADVEACCSSLRGEGEWWWDTLAQLREDALVCCANIAGSVELAGQPEAVARPLLDGLLHWSVCPAAVAGDAPPAAAAGSPLSPRRLALEALCKLCVTDANVDLVLATPPRGRVAQLCAGLARDLCRPERPVVREFAVNILHYLAGAGGAAAREVALHAPAVAQLVAFIERAEHAALGVANQHGVAALRDNPDAMGTSLDMLRRAAATLLRLAEHPENRPLIRRHERRLLSLVMSQILDQKVAHELADVLYHCSQRSDLEPHHEH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2